Strain Fitness in Marinobacter adhaerens HP15 around HP15_1456

Experiment: m.b. Nickel (II) chloride 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1455 and HP15_1456 are separated by 230 nucleotidesHP15_1456 and HP15_1457 are separated by 232 nucleotidesHP15_1457 and HP15_1458 are separated by 73 nucleotides HP15_1455: HP15_1455 - iron(III) ABC transporter, permease protein, at 1,530,464 to 1,532,077 _1455 HP15_1456: HP15_1456 - extracellular solute-binding protein, family 1, at 1,532,308 to 1,533,318 _1456 HP15_1457: HP15_1457 - HAD-superfamily subfamily IB, PSPase-like protein, at 1,533,551 to 1,533,790 _1457 HP15_1458: HP15_1458 - conserved hypothetical protein, at 1,533,864 to 1,534,457 _1458 Position (kb) 1532 1533 1534Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 1531.727 kb on - strand, within HP15_1455at 1531.766 kb on + strand, within HP15_1455at 1531.767 kb on + strand, within HP15_1455at 1531.947 kb on + strandat 1532.057 kb on + strandat 1532.057 kb on + strandat 1532.065 kb on - strandat 1532.065 kb on - strandat 1532.262 kb on + strandat 1532.371 kb on + strandat 1532.581 kb on + strand, within HP15_1456at 1532.711 kb on + strand, within HP15_1456at 1532.895 kb on + strand, within HP15_1456at 1532.988 kb on - strand, within HP15_1456at 1533.217 kb on - strand, within HP15_1456at 1533.217 kb on - strand, within HP15_1456at 1533.476 kb on + strandat 1533.533 kb on - strandat 1533.629 kb on + strand, within HP15_1457at 1533.806 kb on + strandat 1533.825 kb on - strandat 1533.910 kb on + strandat 1533.918 kb on - strandat 1534.013 kb on - strand, within HP15_1458at 1534.081 kb on - strand, within HP15_1458at 1534.289 kb on + strand, within HP15_1458at 1534.316 kb on + strand, within HP15_1458

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM
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1,531,727 - HP15_1455 0.78 -1.3
1,531,766 + HP15_1455 0.81 -3.8
1,531,767 + HP15_1455 0.81 -1.7
1,531,947 + -0.4
1,532,057 + -1.3
1,532,057 + -3.1
1,532,065 - -2.3
1,532,065 - -2.1
1,532,262 + -0.6
1,532,371 + -1.6
1,532,581 + HP15_1456 0.27 -2.7
1,532,711 + HP15_1456 0.40 -1.6
1,532,895 + HP15_1456 0.58 -3.0
1,532,988 - HP15_1456 0.67 -1.4
1,533,217 - HP15_1456 0.90 -1.7
1,533,217 - HP15_1456 0.90 -2.8
1,533,476 + +0.1
1,533,533 - +0.2
1,533,629 + HP15_1457 0.33 -0.0
1,533,806 + +0.2
1,533,825 - +0.0
1,533,910 + +0.4
1,533,918 - -0.7
1,534,013 - HP15_1458 0.25 +0.3
1,534,081 - HP15_1458 0.37 -0.7
1,534,289 + HP15_1458 0.72 +0.4
1,534,316 + HP15_1458 0.76 -0.2

Or see this region's nucleotide sequence