Strain Fitness in Shewanella amazonensis SB2B around Sama_3476

Experiment: Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.004 mg/ml
4,106,311	+		Sama_3475	0.71	-2.7
4,106,311	+		Sama_3475	0.71	+0.0
4,106,312	-		Sama_3475	0.71	+0.1
4,106,333	+		Sama_3475	0.72	+0.1
4,106,333	+		Sama_3475	0.72	-0.6
4,106,333	+		Sama_3475	0.72	+2.3
4,106,333	+		Sama_3475	0.72	-2.3
4,106,333	+		Sama_3475	0.72	-0.9
4,106,333	+		Sama_3475	0.72	-0.1
4,106,333	+		Sama_3475	0.72	-0.4
4,106,334	-		Sama_3475	0.72	-1.1
4,106,334	-		Sama_3475	0.72	+0.5
4,106,334	-		Sama_3475	0.72	+0.7
4,106,334	-		Sama_3475	0.72	-1.3
4,106,334	-		Sama_3475	0.72	+0.2
4,106,334	-		Sama_3475	0.72	-2.1
4,106,334	-		Sama_3475	0.72	-1.0
4,106,334	-		Sama_3475	0.72	-1.5
4,106,334	-		Sama_3475	0.72	+0.3
4,106,334	-		Sama_3475	0.72	-1.3
4,106,363	-		Sama_3475	0.73	-0.1
4,106,363	-		Sama_3475	0.73	-0.1
4,106,449	+		Sama_3475	0.76	+0.1
4,106,449	+		Sama_3475	0.76	+0.5
4,106,449	+		Sama_3475	0.76	+1.5
4,106,450	-		Sama_3475	0.76	+2.1
4,106,450	-		Sama_3475	0.76	-1.1
4,106,450	-		Sama_3475	0.76	-0.7
4,106,572	+		Sama_3475	0.80	-0.4
4,106,572	+		Sama_3475	0.80	-0.7
4,106,572	+		Sama_3475	0.80	+0.1
4,106,572	+		Sama_3475	0.80	+0.3
4,106,573	-		Sama_3475	0.80	+0.2
4,106,573	-		Sama_3475	0.80	-2.6
4,106,573	-		Sama_3475	0.80	-0.1
4,106,573	-		Sama_3475	0.80	+0.8
4,106,573	-		Sama_3475	0.80	+1.9
4,106,576	+		Sama_3475	0.80	+0.3
4,106,576	+		Sama_3475	0.80	-1.1
4,106,576	+		Sama_3475	0.80	-1.6
4,106,576	+		Sama_3475	0.80	+0.9
4,106,576	+		Sama_3475	0.80	+0.1
4,106,576	+		Sama_3475	0.80	-0.4
4,106,576	+		Sama_3475	0.80	+0.2
4,106,576	+		Sama_3475	0.80	-0.5
4,106,576	+		Sama_3475	0.80	-0.3
4,106,576	+		Sama_3475	0.80	+0.7
4,106,576	+		Sama_3475	0.80	-0.7
4,106,576	+		Sama_3475	0.80	+0.2
4,106,576	+		Sama_3475	0.80	-0.5
4,106,576	+		Sama_3475	0.80	+0.3
4,106,577	-		Sama_3475	0.80	-3.1
4,106,577	-		Sama_3475	0.80	+1.0
4,106,577	-		Sama_3475	0.80	+0.7
4,106,577	-		Sama_3475	0.80	+1.6
4,106,577	-		Sama_3475	0.80	+0.6
4,106,577	-		Sama_3475	0.80	-0.4
4,106,577	-		Sama_3475	0.80	+0.3
4,106,626	+		Sama_3475	0.81	-0.1
4,106,626	+		Sama_3475	0.81	+0.4
4,106,627	-		Sama_3475	0.81	+0.6
4,106,627	-		Sama_3475	0.81	-1.6
4,106,632	+		Sama_3475	0.82	-0.1
4,106,632	+		Sama_3475	0.82	+0.4
4,106,632	+		Sama_3475	0.82	+1.0
4,106,632	+		Sama_3475	0.82	+0.7
4,106,632	+		Sama_3475	0.82	-0.4
4,106,632	+		Sama_3475	0.82	-0.3
4,106,632	+		Sama_3475	0.82	+0.1
4,106,633	-		Sama_3475	0.82	+0.3
4,106,633	-		Sama_3475	0.82	+0.1
4,106,633	-		Sama_3475	0.82	-1.1
4,106,633	-		Sama_3475	0.82	-0.3
4,106,650	+		Sama_3475	0.82	+0.9
4,106,650	+		Sama_3475	0.82	+0.0
4,106,651	-		Sama_3475	0.82	+0.3
4,106,651	-		Sama_3475	0.82	-0.7
4,106,656	+		Sama_3475	0.82	+0.3
4,106,656	+		Sama_3475	0.82	-1.2
4,106,656	+		Sama_3475	0.82	-0.2
4,106,656	+		Sama_3475	0.82	-0.6
4,106,656	+		Sama_3475	0.82	+2.9
4,106,656	+		Sama_3475	0.82	-0.7
4,106,656	+		Sama_3475	0.82	-3.0
4,106,656	+		Sama_3475	0.82	-0.8
4,106,656	+		Sama_3475	0.82	-2.0
4,106,656	+		Sama_3475	0.82	-0.6
4,106,656	+		Sama_3475	0.82	+1.5
4,106,656	+		Sama_3475	0.82	+0.6
4,106,656	+		Sama_3475	0.82	+0.9
4,106,656	+		Sama_3475	0.82	-0.8
4,106,656	+		Sama_3475	0.82	-0.2
4,106,656	+		Sama_3475	0.82	-0.4
4,106,657	-		Sama_3475	0.82	-0.7
4,106,657	-		Sama_3475	0.82	+2.3
4,106,657	-		Sama_3475	0.82	+0.8
4,106,657	-		Sama_3475	0.82	-0.4
4,106,657	-		Sama_3475	0.82	+0.5
4,106,657	-		Sama_3475	0.82	-1.4
4,106,657	-		Sama_3475	0.82	-0.4
4,106,657	-		Sama_3475	0.82	-0.2
4,106,657	-		Sama_3475	0.82	+0.4
4,106,657	-		Sama_3475	0.82	-0.6
4,106,657	-		Sama_3475	0.82	+0.4
4,106,657	-		Sama_3475	0.82	+0.9
4,106,657	-		Sama_3475	0.82	-1.4
4,106,657	-		Sama_3475	0.82	+0.3
4,106,657	-		Sama_3475	0.82	+0.4
4,106,657	-		Sama_3475	0.82	+0.4
4,106,657	-		Sama_3475	0.82	-1.8
4,106,657	-		Sama_3475	0.82	-1.9
4,106,657	-		Sama_3475	0.82	-0.7
4,106,657	-		Sama_3475	0.82	+0.8
4,106,658	+		Sama_3475	0.82	+0.9
4,106,658	+		Sama_3475	0.82	+0.2
4,106,658	+		Sama_3475	0.82	+0.3
4,106,658	+		Sama_3475	0.82	-0.7
4,106,658	+		Sama_3475	0.82	+0.4
4,106,658	+		Sama_3475	0.82	-0.8
4,106,658	+		Sama_3475	0.82	+0.9
4,106,658	+		Sama_3475	0.82	-0.1
4,106,658	+		Sama_3475	0.82	+0.8
4,106,658	+		Sama_3475	0.82	-0.8
4,106,658	+		Sama_3475	0.82	+0.9
4,106,658	+		Sama_3475	0.82	+0.1
4,106,658	+		Sama_3475	0.82	-0.4
4,106,658	+		Sama_3475	0.82	+0.6
4,106,658	+		Sama_3475	0.82	-0.0
4,106,659	-		Sama_3475	0.82	-0.5
4,106,659	-		Sama_3475	0.82	+0.2
4,106,659	-		Sama_3475	0.82	-0.4
4,106,659	-		Sama_3475	0.82	-0.9
4,106,659	-		Sama_3475	0.82	+0.0
4,106,659	-		Sama_3475	0.82	-0.6
4,106,659	-		Sama_3475	0.82	-0.4
4,106,659	-		Sama_3475	0.82	-0.1
4,106,659	-		Sama_3475	0.82	-1.6
4,106,659	-		Sama_3475	0.82	-0.4
4,106,659	-		Sama_3475	0.82	+1.1
4,106,659	-		Sama_3475	0.82	+1.6
4,106,659	-		Sama_3475	0.82	+0.3
4,106,659	-		Sama_3475	0.82	+0.8
4,106,659	-		Sama_3475	0.82	+0.4
4,106,681	+		Sama_3475	0.83	+0.2
4,106,681	+		Sama_3475	0.83	-0.6
4,106,682	-		Sama_3475	0.83	+0.0
4,106,682	-		Sama_3475	0.83	+0.2
4,106,718	+		Sama_3475	0.84	+0.7
4,106,718	+		Sama_3475	0.84	-0.3
4,106,719	-		Sama_3475	0.84	+0.0
4,106,810	+		Sama_3475	0.87	+0.6
4,106,810	+		Sama_3475	0.87	-2.7
4,106,810	+		Sama_3475	0.87	+2.1
4,106,810	+		Sama_3475	0.87	+0.2
4,106,810	+		Sama_3475	0.87	+1.1
4,106,810	+		Sama_3475	0.87	-0.7
4,106,810	+		Sama_3475	0.87	-2.8
4,106,811	-		Sama_3475	0.87	-0.5
4,106,811	-		Sama_3475	0.87	-0.0
4,106,811	-		Sama_3475	0.87	+1.1
4,106,811	-		Sama_3475	0.87	-1.1
4,106,811	-		Sama_3475	0.87	-1.6
4,106,811	-		Sama_3475	0.87	-0.8
4,106,812	+		Sama_3475	0.87	+0.9
4,106,812	+		Sama_3475	0.87	-0.4
4,106,812	+		Sama_3475	0.87	+0.2
4,106,812	+		Sama_3475	0.87	+0.2
4,106,813	-		Sama_3475	0.87	-0.5
4,106,813	-		Sama_3475	0.87	-0.7
4,106,813	-		Sama_3475	0.87	+0.9
4,106,813	-		Sama_3475	0.87	-1.9
4,106,813	-		Sama_3475	0.87	+0.0
4,106,813	-		Sama_3475	0.87	+1.1
4,106,813	-		Sama_3475	0.87	-1.0
4,106,824	+		Sama_3475	0.88	-2.7
4,106,824	+		Sama_3475	0.88	+0.1
4,106,824	+		Sama_3475	0.88	+0.3
4,106,824	+		Sama_3475	0.88	-0.9
4,106,824	+		Sama_3475	0.88	-2.4
4,106,824	+		Sama_3475	0.88	-1.1
4,106,824	+		Sama_3475	0.88	-0.1
4,106,825	-		Sama_3475	0.88	+1.9
4,106,825	-		Sama_3475	0.88	+0.2
4,106,825	-		Sama_3475	0.88	+0.3
4,106,825	-		Sama_3475	0.88	+0.6
4,106,853	+		Sama_3475	0.89	+0.2
4,106,853	+		Sama_3475	0.89	-1.0
4,106,905	+				-1.1
4,106,905	+				-0.8
4,106,905	+				-0.3
4,106,905	+				-1.1
4,106,905	+				+0.6
4,106,905	+				-0.4
4,106,905	+				+1.4
4,106,906	-				-0.9
4,106,906	-				-1.4
4,106,906	-				+0.3
4,106,947	+				+0.2
4,106,947	+				+0.3
4,107,001	-				+0.2
4,107,105	+				+0.4
4,107,105	+				-0.6
4,107,105	+				-1.1
4,107,106	-				-0.4
4,107,106	-				+1.2
4,107,106	-				-0.5
4,107,106	-				-0.2
4,107,163	+				+0.4
4,107,173	+				-0.3
4,107,176	-				+0.2
4,107,211	+				-1.3
4,107,211	+				+1.7
4,107,211	+				+0.0
4,107,212	-				-0.2
4,107,216	+				-0.1
4,107,216	+				+1.1
4,107,216	+				+1.3
4,107,216	+				-0.6
4,107,216	+				-0.3
4,107,216	+				+0.8
4,107,217	-				-1.2
4,107,217	-				+0.0
4,107,217	-				-0.1
4,107,217	-				+2.2
4,107,219	+				-0.3
4,107,219	+				+0.3
4,107,220	-				+0.2
4,107,220	-				-0.2
4,107,220	-				-0.9
4,107,224	+				-2.4
4,107,225	-				-1.6
4,107,225	-				-1.0
4,107,228	+				-1.1
4,107,228	+				+0.8
4,107,229	-				+0.4
4,107,229	-				+0.4
4,107,234	+				-1.6
4,107,234	+				-0.2
4,107,234	+				-0.3
4,107,234	+				-1.0
4,107,234	+				-0.6
4,107,234	+				-0.4
4,107,234	+				-0.5
4,107,235	-				+0.1
4,107,235	-				+0.2
4,107,235	-				+0.6
4,107,235	-				+0.3
4,107,235	-				+0.1
4,107,235	-				+0.6
4,107,235	-				+0.4
4,107,235	-				-0.7
4,107,235	-				+1.0
4,107,238	+				+2.1
4,107,238	+				+0.0
4,107,238	+				+0.4
4,107,238	+				-0.8
4,107,238	+				-0.7
4,107,238	+				-0.4
4,107,239	-				-0.7
4,107,239	-				-1.6
4,107,239	-				-2.6
4,107,239	-				+0.4
4,107,239	-				-0.9
4,107,266	+				-1.2
4,107,266	+				+1.6
4,107,267	-				+0.5
4,107,325	+				-1.3
4,107,347	-				+1.4
4,107,347	-				+1.2
4,107,399	+				-1.1
4,107,399	+				-0.5
4,107,400	-				-0.5
4,107,459	+		Sama_3476	0.16	+0.3
4,107,611	+		Sama_3476	0.32	+0.6
4,107,786	+		Sama_3476	0.50	+0.5
4,107,786	+		Sama_3476	0.50	-1.1
4,107,786	+		Sama_3476	0.50	+0.1
4,107,786	+		Sama_3476	0.50	-1.1
4,107,787	-		Sama_3476	0.50	-1.5
4,107,787	-		Sama_3476	0.50	+3.7
4,107,805	+		Sama_3476	0.52	+0.6
4,107,806	-		Sama_3476	0.52	+0.2
4,107,806	-		Sama_3476	0.52	-0.3
4,107,806	-		Sama_3476	0.52	-1.2
4,107,830	+		Sama_3476	0.54	+0.6
4,107,831	-		Sama_3476	0.54	-1.0
4,107,831	-		Sama_3476	0.54	+0.2
4,107,834	+		Sama_3476	0.55	-0.8
4,107,869	+		Sama_3476	0.58	-3.4
4,107,869	+		Sama_3476	0.58	+0.5
4,107,975	-		Sama_3476	0.69	-0.6
4,107,975	-		Sama_3476	0.69	+0.6
4,108,000	+		Sama_3476	0.72	+2.2
4,108,001	-		Sama_3476	0.72	+0.8
4,108,004	+		Sama_3476	0.72	+0.5
4,108,004	+		Sama_3476	0.72	+0.9
4,108,005	-		Sama_3476	0.72	-1.4
4,108,118	+		Sama_3476	0.84	-0.8
4,108,118	+		Sama_3476	0.84	-3.6
4,108,119	-		Sama_3476	0.84	+0.9
4,108,291	+				-0.1
4,108,375	+		Sama_3477	0.10	+1.3
4,108,376	-		Sama_3477	0.10	-0.4
4,108,376	-		Sama_3477	0.10	-0.4
4,108,381	+		Sama_3477	0.11	+1.3
4,108,388	+		Sama_3477	0.12	+0.9
4,108,388	+		Sama_3477	0.12	-1.1
4,108,389	-		Sama_3477	0.12	-1.4
4,108,455	+		Sama_3477	0.21	+1.1
4,108,455	+		Sama_3477	0.21	+1.9
4,108,455	+		Sama_3477	0.21	-1.8
4,108,455	+		Sama_3477	0.21	+0.1
4,108,456	-		Sama_3477	0.21	-0.1
4,108,456	-		Sama_3477	0.21	-0.3
4,108,599	+		Sama_3477	0.39	+1.9
4,108,599	+		Sama_3477	0.39	-0.1
4,108,599	+		Sama_3477	0.39	+0.8
4,108,599	+		Sama_3477	0.39	-0.9
4,108,600	-		Sama_3477	0.39	-0.8
4,108,600	-		Sama_3477	0.39	-0.1
4,108,640	+		Sama_3477	0.44	+0.9
4,108,641	-		Sama_3477	0.45	+0.3
4,108,641	-		Sama_3477	0.45	-1.0
4,108,777	+		Sama_3477	0.62	-0.8
4,108,777	+		Sama_3477	0.62	-1.3
4,108,777	+		Sama_3477	0.62	+0.2
4,108,778	-		Sama_3477	0.62	-1.3
4,108,780	+		Sama_3477	0.62	+0.8
4,108,780	+		Sama_3477	0.62	+0.3
4,108,780	+		Sama_3477	0.62	-1.2
4,108,780	+		Sama_3477	0.62	+0.4
4,108,780	+		Sama_3477	0.62	+1.1
4,108,780	+		Sama_3477	0.62	-0.1
4,108,780	+		Sama_3477	0.62	-0.7
4,108,780	+		Sama_3477	0.62	-0.7
4,108,780	+		Sama_3477	0.62	-0.4
4,108,780	+		Sama_3477	0.62	+0.1
4,108,780	+		Sama_3477	0.62	+1.5
4,108,781	-		Sama_3477	0.63	+0.0
4,108,781	-		Sama_3477	0.63	+0.4
4,108,781	-		Sama_3477	0.63	-2.1
4,108,781	-		Sama_3477	0.63	-1.5
4,108,781	-		Sama_3477	0.63	+1.4
4,108,781	-		Sama_3477	0.63	-0.9
4,108,781	-		Sama_3477	0.63	-1.4
4,108,781	-		Sama_3477	0.63	-0.5
4,108,781	-		Sama_3477	0.63	-1.6
4,108,801	+		Sama_3477	0.65	-1.7
4,108,842	+		Sama_3477	0.70	+0.1
4,108,842	+		Sama_3477	0.70	-1.3
4,108,842	+		Sama_3477	0.70	-0.8
4,108,843	-		Sama_3477	0.71	-0.7
4,108,843	-		Sama_3477	0.71	-0.1
4,108,863	-		Sama_3477	0.73	+0.7
4,108,863	-		Sama_3477	0.73	+0.8
4,108,893	+		Sama_3477	0.77	+0.4
4,108,893	+		Sama_3477	0.77	-0.8
4,108,893	+		Sama_3477	0.77	+0.4
4,108,893	+		Sama_3477	0.77	-1.1
4,108,893	+		Sama_3477	0.77	-2.7
4,108,893	+		Sama_3477	0.77	+0.9
4,108,893	+		Sama_3477	0.77	-0.5
4,108,894	-		Sama_3477	0.77	+1.1
4,108,894	-		Sama_3477	0.77	-1.1
4,108,894	-		Sama_3477	0.77	+2.1
4,108,894	-		Sama_3477	0.77	+1.4
4,108,894	-		Sama_3477	0.77	+0.0
4,108,924	+		Sama_3477	0.81	+0.1
4,108,924	+		Sama_3477	0.81	-0.8
4,108,925	-		Sama_3477	0.81	+0.9
4,108,925	-		Sama_3477	0.81	+1.7
4,108,925	-		Sama_3477	0.81	+0.3
4,108,957	+		Sama_3477	0.85	+1.1
4,108,984	+		Sama_3477	0.89	-0.1
4,108,984	+		Sama_3477	0.89	-1.2
4,108,984	+		Sama_3477	0.89	+0.9
4,108,984	+		Sama_3477	0.89	-0.7
4,108,984	+		Sama_3477	0.89	+1.1
4,108,984	+		Sama_3477	0.89	+0.2
4,108,985	-		Sama_3477	0.89	+0.7
4,108,989	+		Sama_3477	0.89	-0.4
4,108,989	+		Sama_3477	0.89	+1.9
4,108,990	-		Sama_3477	0.89	-0.1
4,108,990	-		Sama_3477	0.89	-0.2
4,109,055	+				+1.1
4,109,056	-				-1.2
4,109,056	-				+0.6
4,109,064	-				-1.4
4,109,090	+				-1.4
4,109,090	+				+0.1
4,109,090	+				-0.5
4,109,090	+				-0.2
4,109,090	+				-0.7
4,109,090	+				+1.9
4,109,090	+				+2.0
4,109,090	+				-1.6
4,109,091	-				-1.9
4,109,091	-				-0.5
4,109,091	-				+1.1
4,109,091	-				+0.6
4,109,091	-				+0.9
4,109,091	-				+0.5
4,109,091	-				+1.0
4,109,091	-				-0.3
4,109,096	+				+0.3
4,109,110	+				+0.4
4,109,111	-				-0.1
4,109,111	-				+0.0
4,109,111	-				-0.8
4,109,114	+				+0.2
4,109,114	+				-1.9
4,109,114	+				+0.3
4,109,114	+				+0.4
4,109,120	+				-1.7
4,109,120	+				-0.4
4,109,120	+				+0.6
4,109,120	+				-2.1
4,109,120	+				-0.5
4,109,120	+				+0.6
4,109,121	-				+0.0
4,109,121	-				-2.0
4,109,121	-				-0.1
4,109,124	+				-0.7
4,109,124	+				+1.6
4,109,125	-				+1.9
4,109,125	-				-0.7
4,109,125	-				-0.2
4,109,134	+				-1.1
4,109,134	+				+0.8
4,109,134	+				+0.6
4,109,134	+				-0.1
4,109,135	-				-0.4
4,109,135	-				+0.3
4,109,135	-				-2.8
4,109,169	+				+1.6
4,109,169	+				+0.0
4,109,169	+				-0.6
4,109,169	+				-2.1
4,109,169	+				+0.4
4,109,169	+				+2.4
4,109,170	-				-0.5
4,109,170	-				-1.8
4,109,170	-				-0.6
4,109,192	+				+0.2
4,109,192	+				+1.1
4,109,193	-				-3.1
4,109,257	+		Sama_3478	0.20	+1.1