Strain Fitness in Shewanella amazonensis SB2B around Sama_3465

Experiment: Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.004 mg/ml
4,094,127	+		Sama_3463	0.89	-1.0
4,094,127	+		Sama_3463	0.89	+0.5
4,094,127	+		Sama_3463	0.89	+0.6
4,094,127	+		Sama_3463	0.89	-2.2
4,094,127	+		Sama_3463	0.89	-2.0
4,094,127	+		Sama_3463	0.89	-1.2
4,094,127	+		Sama_3463	0.89	-1.4
4,094,127	+		Sama_3463	0.89	-0.4
4,094,128	-		Sama_3463	0.89	-2.2
4,094,128	-		Sama_3463	0.89	+0.3
4,094,201	-				-1.0
4,094,313	+				+0.6
4,094,314	-				+0.3
4,094,338	-				-0.7
4,094,338	-				-0.1
4,094,939	+				-1.8
4,094,995	+				+0.9
4,094,996	-				+0.1
4,094,996	-				-1.9
4,095,005	+				+0.4
4,095,006	-				+0.2
4,095,879	-				-1.9
4,095,937	-				-0.3
4,095,937	-				+0.9
4,096,007	+				+0.3
4,096,008	-				-0.1
4,096,008	-				-1.7
4,096,075	+				-1.9
4,096,075	+				-0.1
4,096,076	-				-2.4
4,096,090	-				-0.6
4,096,097	+				+1.0
4,096,098	-				+1.3
4,096,120	+				-2.8
4,096,120	+				-3.2
4,096,120	+				-1.9
4,096,120	+				-2.6
4,096,120	+				-0.4
4,096,121	-				+0.9
4,096,121	-				-2.7
4,096,121	-				-2.3
4,096,121	-				-2.1
4,096,121	-				-1.8
4,096,182	+		Sama_3466	0.11	-1.1
4,096,182	+		Sama_3466	0.11	-1.4
4,096,183	-		Sama_3466	0.11	-2.3
4,096,183	-		Sama_3466	0.11	-1.1
4,096,210	+		Sama_3466	0.14	-0.6
4,096,247	-		Sama_3466	0.18	-2.5
4,096,266	-		Sama_3466	0.20	-1.6
4,096,266	-		Sama_3466	0.20	-3.4
4,096,300	+		Sama_3466	0.23	-0.5
4,096,300	+		Sama_3466	0.23	-2.3
4,096,300	+		Sama_3466	0.23	-0.8
4,096,301	-		Sama_3466	0.23	-2.8
4,096,301	-		Sama_3466	0.23	-0.7
4,096,316	-		Sama_3466	0.25	-1.1
4,096,316	-		Sama_3466	0.25	+0.1
4,096,334	+		Sama_3466	0.27	-2.8
4,096,335	-		Sama_3466	0.27	-1.7
4,096,391	+		Sama_3466	0.33	-1.0
4,096,392	-		Sama_3466	0.33	-1.5
4,096,409	+		Sama_3466	0.34	-0.7
4,096,409	+		Sama_3466	0.34	-1.1
4,096,409	+		Sama_3466	0.34	-2.3
4,096,410	-		Sama_3466	0.34	+0.9
4,096,410	-		Sama_3466	0.34	-0.1
4,096,416	+		Sama_3466	0.35	-2.7
4,096,416	+		Sama_3466	0.35	+0.6
4,096,417	-		Sama_3466	0.35	-1.4
4,096,421	+		Sama_3466	0.36	-2.6
4,096,421	+		Sama_3466	0.36	-2.1
4,096,421	+		Sama_3466	0.36	-2.8
4,096,421	+		Sama_3466	0.36	-2.3
4,096,421	+		Sama_3466	0.36	-1.4
4,096,421	+		Sama_3466	0.36	-1.2
4,096,421	+		Sama_3466	0.36	-1.5
4,096,421	+		Sama_3466	0.36	-1.0
4,096,421	+		Sama_3466	0.36	-2.7
4,096,421	+		Sama_3466	0.36	-2.7
4,096,421	+		Sama_3466	0.36	-1.7
4,096,421	+		Sama_3466	0.36	-2.5
4,096,421	+		Sama_3466	0.36	-0.4
4,096,421	+		Sama_3466	0.36	-0.7
4,096,422	-		Sama_3466	0.36	-2.6
4,096,422	-		Sama_3466	0.36	-0.7
4,096,422	-		Sama_3466	0.36	-2.0
4,096,422	-		Sama_3466	0.36	+2.3
4,096,422	-		Sama_3466	0.36	-2.7
4,096,422	-		Sama_3466	0.36	-1.2
4,096,422	-		Sama_3466	0.36	-1.4
4,096,422	-		Sama_3466	0.36	-1.7
4,096,422	-		Sama_3466	0.36	-2.4
4,096,425	+		Sama_3466	0.36	-2.1
4,096,425	+		Sama_3466	0.36	-2.5
4,096,426	-		Sama_3466	0.36	-2.1
4,096,579	-		Sama_3466	0.52	-2.7
4,096,579	-		Sama_3466	0.52	-1.1
4,096,579	-		Sama_3466	0.52	-1.0
4,096,581	-		Sama_3466	0.52	-0.8
4,096,581	-		Sama_3466	0.52	-2.0
4,096,581	-		Sama_3466	0.52	-3.3
4,096,646	-		Sama_3466	0.59	-0.4
4,096,646	-		Sama_3466	0.59	-3.0
4,096,646	-		Sama_3466	0.59	-3.7
4,096,707	-		Sama_3466	0.65	-1.8
4,096,711	+		Sama_3466	0.66	-2.0
4,096,711	+		Sama_3466	0.66	-3.0
4,096,711	+		Sama_3466	0.66	-3.1
4,096,711	+		Sama_3466	0.66	-2.1
4,096,711	+		Sama_3466	0.66	-4.2
4,096,711	+		Sama_3466	0.66	-1.0
4,096,712	-		Sama_3466	0.66	-2.1
4,096,712	-		Sama_3466	0.66	-1.1
4,096,712	-		Sama_3466	0.66	-3.7
4,096,712	-		Sama_3466	0.66	-3.9
4,096,712	-		Sama_3466	0.66	-2.0
4,096,712	-		Sama_3466	0.66	-1.4
4,096,726	-		Sama_3466	0.67	-1.7
4,096,736	-		Sama_3466	0.68	-3.1
4,096,736	-		Sama_3466	0.68	-4.0
4,096,793	+		Sama_3466	0.74	-1.9
4,096,794	-		Sama_3466	0.74	-2.7
4,096,857	+		Sama_3466	0.81	-1.1