Strain Fitness in Shewanella amazonensis SB2B around Sama_3361

Experiment: Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.004 mg/ml
3,988,589	-				+1.2
3,988,589	-				-0.2
3,988,589	-				-1.5
3,988,589	-				+0.8
3,988,604	-				+0.4
3,988,604	-				-1.3
3,988,604	-				-0.7
3,988,604	-				+0.3
3,988,604	-				-0.4
3,988,604	-				+0.7
3,988,604	-				+0.2
3,988,604	-				-0.4
3,988,604	-				+2.2
3,988,608	-				+0.8
3,988,608	-				-0.5
3,988,608	-				+0.2
3,988,645	-		Sama_3361	0.13	+0.6
3,988,645	-		Sama_3361	0.13	-0.5
3,988,645	-		Sama_3361	0.13	-0.3
3,988,645	-		Sama_3361	0.13	+0.5
3,988,645	-		Sama_3361	0.13	-2.5
3,988,645	-		Sama_3361	0.13	+0.3
3,988,645	-		Sama_3361	0.13	-0.4
3,988,645	-		Sama_3361	0.13	+0.4
3,988,645	-		Sama_3361	0.13	+0.1
3,988,657	-		Sama_3361	0.14	-0.6
3,988,657	-		Sama_3361	0.14	+0.1
3,988,657	-		Sama_3361	0.14	+0.7
3,988,700	+		Sama_3361	0.21	-2.2
3,988,700	+		Sama_3361	0.21	-0.4
3,988,700	+		Sama_3361	0.21	+0.1
3,988,700	+		Sama_3361	0.21	-1.4
3,988,700	+		Sama_3361	0.21	-0.7
3,988,700	+		Sama_3361	0.21	+1.3
3,988,700	+		Sama_3361	0.21	-0.8
3,988,700	+		Sama_3361	0.21	-1.2
3,988,700	+		Sama_3361	0.21	-0.4
3,988,700	+		Sama_3361	0.21	+0.4
3,988,701	-		Sama_3361	0.21	+0.7
3,988,701	-		Sama_3361	0.21	-0.2
3,988,701	-		Sama_3361	0.21	+0.1
3,988,701	-		Sama_3361	0.21	-0.1
3,988,702	+		Sama_3361	0.21	-0.1
3,988,702	+		Sama_3361	0.21	-0.0
3,988,702	+		Sama_3361	0.21	+0.8
3,988,702	+		Sama_3361	0.21	+0.7
3,988,702	+		Sama_3361	0.21	-0.2
3,988,703	-		Sama_3361	0.21	+0.4
3,988,703	-		Sama_3361	0.21	-0.7
3,988,703	-		Sama_3361	0.21	-0.4
3,988,703	-		Sama_3361	0.21	-1.9
3,988,885	+		Sama_3361	0.48	+0.7
3,988,886	-		Sama_3361	0.48	+0.3
3,988,886	-		Sama_3361	0.48	-2.0
3,988,886	-		Sama_3361	0.48	+0.0
3,988,891	+		Sama_3361	0.49	+0.3
3,988,897	+		Sama_3361	0.49	-2.0
3,988,897	+		Sama_3361	0.49	-0.5
3,988,953	+		Sama_3361	0.58	+0.6
3,988,953	+		Sama_3361	0.58	+0.0
3,988,953	+		Sama_3361	0.58	+1.4
3,988,953	+		Sama_3361	0.58	-0.3
3,988,953	+		Sama_3361	0.58	+0.6
3,988,953	+		Sama_3361	0.58	+1.3
3,988,953	+		Sama_3361	0.58	+0.6
3,988,953	+		Sama_3361	0.58	+0.6
3,988,953	+		Sama_3361	0.58	+0.3
3,988,953	+		Sama_3361	0.58	+0.1
3,988,953	+		Sama_3361	0.58	-0.3
3,988,953	+		Sama_3361	0.58	+0.6
3,988,953	+		Sama_3361	0.58	+1.4
3,988,953	+		Sama_3361	0.58	-1.2
3,988,954	-		Sama_3361	0.58	+0.4
3,988,954	-		Sama_3361	0.58	+1.7
3,988,954	-		Sama_3361	0.58	+0.5
3,988,954	-		Sama_3361	0.58	+0.7
3,988,954	-		Sama_3361	0.58	-0.4
3,988,954	-		Sama_3361	0.58	-0.2
3,988,954	-		Sama_3361	0.58	-0.2
3,988,954	-		Sama_3361	0.58	-1.5
3,988,986	+		Sama_3361	0.62	-0.1
3,988,986	+		Sama_3361	0.62	-0.6
3,988,996	+		Sama_3361	0.64	+1.3
3,988,996	+		Sama_3361	0.64	+1.6
3,988,996	+		Sama_3361	0.64	+0.6
3,988,997	-		Sama_3361	0.64	+0.4
3,988,997	-		Sama_3361	0.64	+0.8
3,989,023	+		Sama_3361	0.68	+2.2
3,989,023	+		Sama_3361	0.68	+0.5
3,989,024	-		Sama_3361	0.68	+0.5
3,989,024	-		Sama_3361	0.68	-0.2
3,989,024	-		Sama_3361	0.68	+0.4
3,989,224	+				+1.6
3,989,225	-				+1.1
3,989,251	+				+0.2
3,989,251	+				+0.1
3,989,252	-				-0.7
3,989,252	-				+0.8
3,989,252	-				+0.8
3,989,252	-				-0.4
3,989,252	-				-0.0
3,989,252	-				+1.0
3,989,252	-				-0.1
3,989,907	-				-0.2
3,990,036	-				-2.0
3,990,036	-				+0.7
3,990,043	+				-2.0
3,990,088	-				-1.1
3,990,185	+		Sama_3363	0.18	-2.2
3,990,185	+		Sama_3363	0.18	-2.3
3,990,185	+		Sama_3363	0.18	-2.6
3,990,186	-		Sama_3363	0.19	-1.7
3,990,186	-		Sama_3363	0.19	-0.7
3,990,189	+		Sama_3363	0.19	-2.0
3,990,212	+		Sama_3363	0.25	-3.8