Strain Fitness in Shewanella amazonensis SB2B around Sama_2753

Experiment: Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.004 mg/ml
3,290,147	-		Sama_2751	0.46	+1.6
3,290,158	+		Sama_2751	0.48	-3.8
3,290,158	+		Sama_2751	0.48	+0.4
3,290,158	+		Sama_2751	0.48	-0.7
3,290,158	+		Sama_2751	0.48	+0.1
3,290,159	-		Sama_2751	0.48	+0.2
3,290,159	-		Sama_2751	0.48	+0.4
3,290,159	-		Sama_2751	0.48	+0.5
3,290,271	-		Sama_2751	0.69	+0.8
3,290,271	-		Sama_2751	0.69	+0.7
3,290,273	+		Sama_2751	0.70	+0.9
3,290,274	-		Sama_2751	0.70	-2.0
3,290,274	-		Sama_2751	0.70	-0.9
3,290,299	+		Sama_2751	0.74	-2.6
3,290,300	-		Sama_2751	0.75	-0.8
3,290,300	-		Sama_2751	0.75	+0.5
3,290,300	-		Sama_2751	0.75	+1.1
3,290,349	+		Sama_2751	0.84	+1.3
3,290,350	-		Sama_2751	0.84	+0.1
3,290,350	-		Sama_2751	0.84	+0.3
3,290,376	+		Sama_2751	0.89	-0.4
3,290,483	+				-0.5
3,290,483	+				-0.2
3,290,484	-				-0.4
3,290,484	-				+0.8
3,290,525	-				+1.1
3,290,534	+				+0.4
3,290,534	+				+0.0
3,290,534	+				+1.3
3,290,534	+				+0.2
3,290,534	+				-0.1
3,290,535	-				-0.5
3,290,535	-				+0.4
3,290,542	-				+0.6
3,290,542	-				+1.7
3,290,655	+		Sama_2752	0.32	+0.4
3,290,655	+		Sama_2752	0.32	+1.3
3,290,655	+		Sama_2752	0.32	-2.0
3,290,656	-		Sama_2752	0.32	+1.8
3,290,656	-		Sama_2752	0.32	+1.7
3,290,659	+		Sama_2752	0.33	+0.4
3,290,660	-		Sama_2752	0.33	+0.6
3,290,674	-		Sama_2752	0.36	+0.3
3,290,745	-		Sama_2752	0.54	-0.4
3,290,858	+		Sama_2752	0.81	-0.6
3,290,947	+				-0.5
3,290,947	+				+0.5
3,290,948	-				+0.3
3,290,948	-				+0.9
3,290,948	-				+0.8
3,290,948	-				-0.5
3,290,950	+				+1.3
3,290,962	+				+0.7
3,290,963	-				+0.4
3,290,964	+				-1.2
3,290,965	-				-2.6
3,290,967	-				+0.2
3,291,044	+				+0.2
3,291,054	-				-0.4
3,291,059	+				-1.4
3,291,060	-				-0.5
3,291,079	+				-1.1
3,291,081	+				+1.0
3,291,081	+				-0.3
3,291,081	+				-1.0
3,291,081	+				+0.0
3,291,081	+				-0.4
3,291,081	+				-0.9
3,291,081	+				+0.3
3,291,082	-				+0.6
3,291,082	-				+0.5
3,291,082	-				+0.2
3,291,082	-				-0.6
3,291,082	-				-1.4
3,291,082	-				-3.2
3,291,082	-				-0.1
3,291,082	-				-1.0
3,291,082	-				-1.0
3,291,085	+				+0.0
3,291,085	+				+0.2
3,291,085	+				+0.9
3,291,191	+				-2.0
3,291,191	+				+0.1
3,291,191	+				+0.1
3,291,191	+				-1.9
3,291,191	+				+1.0
3,291,191	+				-0.2
3,291,191	+				-0.8
3,291,191	+				+1.4
3,291,191	+				+0.8
3,291,191	+				+1.2
3,291,191	+				-0.7
3,291,192	-				+2.1
3,291,192	-				+1.3
3,291,192	-				-3.0
3,291,192	-				+0.5
3,291,192	-				-0.7
3,291,192	-				-0.7
3,291,192	-				-0.7
3,291,192	-				-0.1
3,291,192	-				+0.8
3,291,192	-				-0.1
3,291,192	-				-0.3
3,291,192	-				-0.7
3,291,192	-				-0.9
3,291,192	-				+0.1
3,291,192	-				+1.1
3,291,192	-				-0.2
3,291,192	-				-1.3
3,291,192	-				-0.1
3,291,192	-				-0.9
3,291,192	-				-1.8
3,291,192	-				+0.3
3,291,193	+				+2.1
3,291,194	-				-0.9
3,291,240	+		Sama_2753	0.10	+0.2
3,291,240	+		Sama_2753	0.10	-0.3
3,291,240	+		Sama_2753	0.10	-1.4
3,291,241	-		Sama_2753	0.10	+0.6
3,291,241	-		Sama_2753	0.10	+0.5
3,291,323	-		Sama_2753	0.16	-0.6
3,291,342	+		Sama_2753	0.17	-0.8
3,291,342	+		Sama_2753	0.17	+0.0
3,291,386	+		Sama_2753	0.20	+0.0
3,291,387	-		Sama_2753	0.20	-0.9
3,291,387	-		Sama_2753	0.20	-0.7
3,291,387	-		Sama_2753	0.20	+0.4
3,291,387	-		Sama_2753	0.20	-0.0
3,291,387	-		Sama_2753	0.20	+0.7
3,291,387	-		Sama_2753	0.20	+0.9
3,291,387	-		Sama_2753	0.20	-1.2
3,291,387	-		Sama_2753	0.20	-0.3
3,291,406	-		Sama_2753	0.21	-0.5
3,291,407	+		Sama_2753	0.21	+1.1
3,291,407	+		Sama_2753	0.21	-2.1
3,291,407	+		Sama_2753	0.21	-0.7
3,291,407	+		Sama_2753	0.21	+2.6
3,291,407	+		Sama_2753	0.21	-0.4
3,291,407	+		Sama_2753	0.21	+0.5
3,291,407	+		Sama_2753	0.21	+0.3
3,291,407	+		Sama_2753	0.21	-1.3
3,291,407	+		Sama_2753	0.21	+0.8
3,291,407	+		Sama_2753	0.21	+0.4
3,291,407	+		Sama_2753	0.21	+0.5
3,291,408	-		Sama_2753	0.22	+0.2
3,291,408	-		Sama_2753	0.22	+1.0
3,291,408	-		Sama_2753	0.22	+0.3
3,291,408	-		Sama_2753	0.22	+0.2
3,291,408	-		Sama_2753	0.22	-0.8
3,291,408	-		Sama_2753	0.22	+0.2
3,291,408	-		Sama_2753	0.22	-0.1
3,291,408	-		Sama_2753	0.22	-0.5
3,291,408	-		Sama_2753	0.22	-2.7
3,291,408	-		Sama_2753	0.22	+0.0
3,291,408	-		Sama_2753	0.22	+0.6
3,291,408	-		Sama_2753	0.22	+1.4
3,291,408	-		Sama_2753	0.22	-0.6
3,291,422	-		Sama_2753	0.22	+1.1
3,291,435	-		Sama_2753	0.23	-1.3
3,291,435	-		Sama_2753	0.23	+0.5
3,291,442	-		Sama_2753	0.24	+0.3
3,291,523	+		Sama_2753	0.29	+1.5
3,291,523	+		Sama_2753	0.29	+0.6
3,291,523	+		Sama_2753	0.29	-0.7
3,291,524	-		Sama_2753	0.29	+0.6
3,291,524	-		Sama_2753	0.29	+0.6
3,291,551	+		Sama_2753	0.31	-0.1
3,291,552	-		Sama_2753	0.31	-0.4
3,291,699	+		Sama_2753	0.41	+0.3
3,291,699	+		Sama_2753	0.41	-2.0
3,291,699	+		Sama_2753	0.41	+0.3
3,291,700	-		Sama_2753	0.41	-1.7
3,291,700	-		Sama_2753	0.41	-0.4
3,291,712	+		Sama_2753	0.42	+0.7
3,291,713	-		Sama_2753	0.42	-2.5
3,291,733	+		Sama_2753	0.44	-0.0
3,291,771	+		Sama_2753	0.46	+0.5
3,291,772	-		Sama_2753	0.46	+0.8
3,291,772	-		Sama_2753	0.46	+0.3
3,291,776	-		Sama_2753	0.47	+0.6
3,291,843	+		Sama_2753	0.51	-0.1
3,291,844	-		Sama_2753	0.51	-2.9
3,291,895	+		Sama_2753	0.55	+0.5
3,291,895	+		Sama_2753	0.55	-0.7
3,291,895	+		Sama_2753	0.55	+0.2
3,291,895	+		Sama_2753	0.55	+0.4
3,291,896	-		Sama_2753	0.55	+0.3
3,291,896	-		Sama_2753	0.55	-0.5
3,291,896	-		Sama_2753	0.55	+1.6
3,291,896	-		Sama_2753	0.55	+2.0
3,291,927	+		Sama_2753	0.57	-0.2
3,291,927	+		Sama_2753	0.57	+0.6
3,291,928	-		Sama_2753	0.57	+1.2
3,291,975	+		Sama_2753	0.60	-0.2
3,291,975	+		Sama_2753	0.60	-0.0
3,291,976	-		Sama_2753	0.60	+0.0
3,291,976	-		Sama_2753	0.60	+0.7
3,291,976	-		Sama_2753	0.60	-0.2
3,291,981	+		Sama_2753	0.60	+0.3
3,291,981	+		Sama_2753	0.60	-1.0
3,291,981	+		Sama_2753	0.60	-0.7
3,291,996	+		Sama_2753	0.61	-0.3
3,292,192	-		Sama_2753	0.75	-0.3
3,292,192	-		Sama_2753	0.75	+1.4
3,292,192	-		Sama_2753	0.75	+0.6
3,292,193	+		Sama_2753	0.75	+1.3
3,292,193	+		Sama_2753	0.75	-0.9
3,292,193	+		Sama_2753	0.75	-1.4
3,292,193	+		Sama_2753	0.75	-0.1
3,292,193	+		Sama_2753	0.75	+0.0
3,292,193	+		Sama_2753	0.75	+0.2
3,292,193	+		Sama_2753	0.75	+0.7
3,292,193	+		Sama_2753	0.75	+1.0
3,292,193	+		Sama_2753	0.75	-1.7
3,292,193	+		Sama_2753	0.75	-1.2
3,292,193	+		Sama_2753	0.75	-0.7
3,292,193	+		Sama_2753	0.75	+0.0
3,292,193	+		Sama_2753	0.75	+1.2
3,292,193	+		Sama_2753	0.75	-1.2
3,292,193	+		Sama_2753	0.75	+0.5
3,292,194	-		Sama_2753	0.75	-0.1
3,292,194	-		Sama_2753	0.75	-1.0
3,292,194	-		Sama_2753	0.75	-0.6
3,292,194	-		Sama_2753	0.75	+0.2
3,292,194	-		Sama_2753	0.75	+0.1
3,292,194	-		Sama_2753	0.75	-2.6
3,292,194	-		Sama_2753	0.75	+0.4
3,292,233	-		Sama_2753	0.78	-0.9
3,292,233	-		Sama_2753	0.78	-0.6
3,292,251	+		Sama_2753	0.79	+0.6
3,292,252	-		Sama_2753	0.79	-0.4
3,292,252	-		Sama_2753	0.79	-0.3
3,292,292	+		Sama_2753	0.82	+0.8
3,292,292	+		Sama_2753	0.82	+0.6
3,292,293	-		Sama_2753	0.82	+1.3
3,292,317	+		Sama_2753	0.83	-1.1
3,292,386	+		Sama_2753	0.88	+0.7
3,292,387	-		Sama_2753	0.88	-0.7
3,292,388	+		Sama_2753	0.88	+1.2
3,292,388	+		Sama_2753	0.88	-0.7
3,292,388	+		Sama_2753	0.88	-1.6
3,292,388	+		Sama_2753	0.88	-0.3
3,292,389	-		Sama_2753	0.88	+0.4
3,292,389	-		Sama_2753	0.88	+0.5
3,292,389	-		Sama_2753	0.88	-0.1
3,292,389	-		Sama_2753	0.88	-1.4
3,292,389	-		Sama_2753	0.88	-0.4
3,292,389	-		Sama_2753	0.88	+0.4
3,292,397	-		Sama_2753	0.89	+0.6
3,292,527	+				+0.7
3,292,563	+				-0.2
3,292,563	+				-0.2
3,292,563	+				-2.4
3,292,563	+				-0.5
3,292,563	+				+0.2
3,292,564	-				-0.3
3,292,564	-				-0.1
3,292,564	-				-0.6
3,292,564	-				+0.8
3,292,564	-				-0.1
3,292,581	-				-2.0
3,292,581	-				+1.2
3,292,599	-				-0.8
3,292,694	-				+0.6
3,292,756	-				+0.5
3,292,764	+				-1.6
3,292,765	-				-0.4
3,292,765	-				-0.1
3,292,777	+				-2.0
3,292,778	-				+0.1
3,292,804	+				-0.6
3,292,828	-				-2.0
3,292,828	-				-1.3
3,292,870	+		Sama_2754	0.16	-1.0
3,292,870	+		Sama_2754	0.16	-3.1
3,292,871	-		Sama_2754	0.16	-1.0
3,292,871	-		Sama_2754	0.16	-3.2
3,292,930	+		Sama_2754	0.24	-2.6
3,293,089	+		Sama_2754	0.45	-1.6
3,293,089	+		Sama_2754	0.45	-1.0
3,293,089	+		Sama_2754	0.45	-2.4
3,293,090	-		Sama_2754	0.45	-0.6
3,293,119	-		Sama_2754	0.49	-4.6
3,293,140	+		Sama_2754	0.52	+1.0
3,293,140	+		Sama_2754	0.52	-0.3
3,293,140	+		Sama_2754	0.52	-2.9
3,293,140	+		Sama_2754	0.52	-2.1
3,293,142	+		Sama_2754	0.52	-1.9
3,293,142	+		Sama_2754	0.52	-4.0
3,293,142	+		Sama_2754	0.52	-3.2
3,293,142	+		Sama_2754	0.52	-3.2
3,293,142	+		Sama_2754	0.52	-2.2
3,293,143	-		Sama_2754	0.52	-0.7
3,293,143	-		Sama_2754	0.52	-2.4
3,293,143	-		Sama_2754	0.52	-3.6
3,293,143	-		Sama_2754	0.52	-2.7
3,293,143	-		Sama_2754	0.52	-2.9
3,293,156	-		Sama_2754	0.54	-0.9
3,293,172	+		Sama_2754	0.56	+0.4
3,293,172	+		Sama_2754	0.56	+0.4
3,293,173	-		Sama_2754	0.56	-0.8
3,293,173	-		Sama_2754	0.56	-1.7
3,293,173	-		Sama_2754	0.56	-2.7
3,293,173	-		Sama_2754	0.56	-1.2
3,293,193	+		Sama_2754	0.59	+2.2
3,293,193	+		Sama_2754	0.59	-2.0
3,293,194	-		Sama_2754	0.59	-2.4
3,293,194	-		Sama_2754	0.59	-1.2
3,293,194	-		Sama_2754	0.59	-1.5
3,293,194	-		Sama_2754	0.59	-1.2
3,293,212	+		Sama_2754	0.62	-4.0
3,293,212	+		Sama_2754	0.62	-2.2
3,293,213	-		Sama_2754	0.62	-2.0
3,293,213	-		Sama_2754	0.62	-3.7
3,293,213	-		Sama_2754	0.62	-2.0
3,293,214	+		Sama_2754	0.62	-3.9
3,293,214	+		Sama_2754	0.62	-1.0
3,293,214	+		Sama_2754	0.62	-1.4
3,293,215	-		Sama_2754	0.62	-1.4
3,293,215	-		Sama_2754	0.62	-3.2
3,293,215	-		Sama_2754	0.62	-3.5
3,293,215	-		Sama_2754	0.62	-3.7
3,293,215	-		Sama_2754	0.62	-0.4
3,293,218	+		Sama_2754	0.62	+0.2
3,293,218	+		Sama_2754	0.62	+0.6
3,293,219	-		Sama_2754	0.62	-0.8
3,293,219	-		Sama_2754	0.62	-1.4
3,293,219	-		Sama_2754	0.62	-0.6
3,293,238	+		Sama_2754	0.65	-0.6
3,293,238	+		Sama_2754	0.65	-1.1
3,293,274	+		Sama_2754	0.70	-2.2
3,293,274	+		Sama_2754	0.70	-3.1
3,293,292	+		Sama_2754	0.72	-3.4
3,293,309	-		Sama_2754	0.75	-2.6
3,293,509	+				-3.1
3,293,509	+				-1.6
3,293,510	-				+0.7
3,293,510	-				+0.2