Strain Fitness in Shewanella amazonensis SB2B around Sama_2625

Experiment: Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.004 mg/ml
3,142,873	+				+0.3
3,142,918	+				+0.2
3,142,919	-				-0.7
3,142,959	-				-1.6
3,142,959	-				-0.1
3,142,959	-				-0.2
3,142,959	-				+0.2
3,142,977	-				-2.6
3,143,086	+		Sama_2624	0.21	-2.0
3,143,086	+		Sama_2624	0.21	-0.2
3,143,087	-		Sama_2624	0.21	+0.5
3,143,087	-		Sama_2624	0.21	+1.2
3,143,113	-		Sama_2624	0.24	-0.3
3,143,135	+		Sama_2624	0.27	+0.5
3,143,136	-		Sama_2624	0.27	+0.2
3,143,138	+		Sama_2624	0.27	-0.4
3,143,139	-		Sama_2624	0.27	-1.8
3,143,154	+		Sama_2624	0.29	+0.2
3,143,154	+		Sama_2624	0.29	-2.1
3,143,155	-		Sama_2624	0.29	-0.6
3,143,155	-		Sama_2624	0.29	+0.4
3,143,160	-		Sama_2624	0.30	+1.0
3,143,160	-		Sama_2624	0.30	-0.3
3,143,189	-		Sama_2624	0.33	+0.1
3,143,189	-		Sama_2624	0.33	+0.5
3,143,233	+		Sama_2624	0.39	-0.8
3,143,241	+		Sama_2624	0.40	-2.2
3,143,242	-		Sama_2624	0.40	-1.4
3,143,267	+		Sama_2624	0.43	+0.5
3,143,268	-		Sama_2624	0.43	+1.0
3,143,268	-		Sama_2624	0.43	+0.6
3,143,299	+		Sama_2624	0.47	-2.0
3,143,300	-		Sama_2624	0.47	-0.4
3,143,300	-		Sama_2624	0.47	-0.9
3,143,301	+		Sama_2624	0.47	-0.1
3,143,301	+		Sama_2624	0.47	-0.2
3,143,301	+		Sama_2624	0.47	-0.7
3,143,301	+		Sama_2624	0.47	-1.0
3,143,301	+		Sama_2624	0.47	+0.3
3,143,301	+		Sama_2624	0.47	+0.9
3,143,302	-		Sama_2624	0.47	-2.0
3,143,355	-		Sama_2624	0.54	+0.3
3,143,371	+		Sama_2624	0.56	-1.0
3,143,372	-		Sama_2624	0.56	-0.2
3,143,372	-		Sama_2624	0.56	-0.2
3,143,378	+		Sama_2624	0.56	-1.3
3,143,421	-		Sama_2624	0.62	+0.8
3,143,436	-		Sama_2624	0.64	-1.4
3,143,483	+		Sama_2624	0.69	+1.6
3,143,483	+		Sama_2624	0.69	+0.6
3,143,484	-		Sama_2624	0.69	+0.3
3,143,484	-		Sama_2624	0.69	-1.8
3,143,484	-		Sama_2624	0.69	+0.2
3,143,484	-		Sama_2624	0.69	+0.1
3,143,484	-		Sama_2624	0.69	-1.0
3,143,484	-		Sama_2624	0.69	+1.1
3,143,484	-		Sama_2624	0.69	-1.8
3,143,484	-		Sama_2624	0.69	+0.5
3,143,484	-		Sama_2624	0.69	+0.6
3,143,485	+		Sama_2624	0.70	-0.1
3,143,485	+		Sama_2624	0.70	-0.1
3,143,485	+		Sama_2624	0.70	+0.0
3,143,485	+		Sama_2624	0.70	-2.2
3,143,485	+		Sama_2624	0.70	+0.6
3,143,486	-		Sama_2624	0.70	+2.2
3,143,486	-		Sama_2624	0.70	-1.3
3,143,486	-		Sama_2624	0.70	-1.8
3,143,486	-		Sama_2624	0.70	+0.1
3,143,486	-		Sama_2624	0.70	-0.5
3,143,486	-		Sama_2624	0.70	+1.1
3,143,486	-		Sama_2624	0.70	+0.2
3,143,511	+		Sama_2624	0.73	+1.4
3,143,511	+		Sama_2624	0.73	-0.1
3,143,511	+		Sama_2624	0.73	+0.7
3,143,511	+		Sama_2624	0.73	-2.9
3,143,512	-		Sama_2624	0.73	+0.5
3,143,512	-		Sama_2624	0.73	-0.3
3,143,512	-		Sama_2624	0.73	-1.2
3,143,512	-		Sama_2624	0.73	-1.1
3,143,512	-		Sama_2624	0.73	-0.4
3,143,512	-		Sama_2624	0.73	+0.9
3,143,512	-		Sama_2624	0.73	+0.3
3,143,512	-		Sama_2624	0.73	+0.5
3,143,512	-		Sama_2624	0.73	+0.4
3,143,512	-		Sama_2624	0.73	+0.1
3,143,512	-		Sama_2624	0.73	-0.3
3,143,541	+		Sama_2624	0.76	-0.3
3,143,542	-		Sama_2624	0.77	+0.1
3,143,542	-		Sama_2624	0.77	+0.8
3,143,542	-		Sama_2624	0.77	-0.9
3,143,542	-		Sama_2624	0.77	+0.8
3,143,567	-		Sama_2624	0.80	+0.5
3,143,580	-		Sama_2624	0.81	+0.0
3,143,594	-		Sama_2624	0.83	+1.5
3,143,598	+		Sama_2624	0.83	+1.6
3,143,599	-		Sama_2624	0.84	-0.8
3,143,599	-		Sama_2624	0.84	+1.1
3,143,599	-		Sama_2624	0.84	+0.7
3,143,715	-				-0.2
3,143,715	-				-1.4
3,143,715	-				-0.8
3,143,715	-				+0.8
3,143,715	-				+0.7
3,143,715	-				+0.1
3,143,715	-				-0.9
3,143,759	-				+0.6
3,143,770	-				+1.2
3,143,829	+				+0.3
3,143,829	+				+1.9
3,143,829	+				-1.8
3,143,829	+				-0.4
3,143,830	-				+0.3
3,143,830	-				-2.2
3,143,830	-				+0.6
3,143,858	+				+1.7
3,143,963	+				-1.0
3,143,964	-				-2.4
3,143,971	+				+0.3
3,144,033	+		Sama_2625	0.15	-1.8
3,144,034	-		Sama_2625	0.15	-2.0
3,144,034	-		Sama_2625	0.15	+1.3
3,144,034	-		Sama_2625	0.15	-2.0
3,144,117	+		Sama_2625	0.22	-1.0
3,144,117	+		Sama_2625	0.22	+0.1
3,144,117	+		Sama_2625	0.22	-2.4
3,144,118	-		Sama_2625	0.22	-0.7
3,144,118	-		Sama_2625	0.22	-0.4
3,144,118	-		Sama_2625	0.22	-0.4
3,144,146	+		Sama_2625	0.24	+0.2
3,144,147	-		Sama_2625	0.24	-0.4
3,144,173	+		Sama_2625	0.27	-0.3
3,144,174	-		Sama_2625	0.27	+0.2
3,144,174	-		Sama_2625	0.27	-0.1
3,144,273	+		Sama_2625	0.35	-2.0
3,144,273	+		Sama_2625	0.35	+0.2
3,144,274	-		Sama_2625	0.35	-0.6
3,144,512	-		Sama_2625	0.56	-2.3
3,144,512	-		Sama_2625	0.56	-0.8
3,144,522	+		Sama_2625	0.57	+0.7
3,144,522	+		Sama_2625	0.57	-0.8
3,144,522	+		Sama_2625	0.57	-0.4
3,144,522	+		Sama_2625	0.57	+0.2
3,144,552	+		Sama_2625	0.59	-1.7
3,144,552	+		Sama_2625	0.59	-0.5
3,144,552	+		Sama_2625	0.59	-1.2
3,144,552	+		Sama_2625	0.59	+0.1
3,144,552	+		Sama_2625	0.59	-0.5
3,144,552	+		Sama_2625	0.59	+1.1
3,144,553	-		Sama_2625	0.59	-1.4
3,144,553	-		Sama_2625	0.59	+0.1
3,144,553	-		Sama_2625	0.59	-0.5
3,144,560	+		Sama_2625	0.60	+0.6
3,144,609	-		Sama_2625	0.64	-0.8
3,144,618	+		Sama_2625	0.65	+0.6
3,144,619	-		Sama_2625	0.65	-0.9
3,144,619	-		Sama_2625	0.65	+0.6
3,144,619	-		Sama_2625	0.65	-2.6
3,144,713	-		Sama_2625	0.73	-0.8
3,144,713	-		Sama_2625	0.73	-0.6
3,144,726	-		Sama_2625	0.74	-0.3
3,144,797	+		Sama_2625	0.80	-1.8
3,144,798	-		Sama_2625	0.81	+0.1
3,144,798	-		Sama_2625	0.81	-0.4
3,144,854	+		Sama_2625	0.85	-1.6
3,144,854	+		Sama_2625	0.85	-1.5
3,144,855	-		Sama_2625	0.85	-0.8
3,144,859	+		Sama_2625	0.86	+0.6
3,144,859	+		Sama_2625	0.86	-1.6
3,144,860	-		Sama_2625	0.86	-0.9
3,144,860	-		Sama_2625	0.86	-0.6
3,144,888	-		Sama_2625	0.88	+0.7
3,144,888	-		Sama_2625	0.88	-0.4
3,144,888	-		Sama_2625	0.88	+0.2
3,144,888	-		Sama_2625	0.88	-1.1
3,145,005	-				-0.6
3,145,021	-				+0.6
3,145,021	-				+0.2
3,145,021	-				+0.9
3,145,021	-				-0.5
3,145,021	-				+0.6
3,145,027	+				+0.0
3,145,027	+				+0.8
3,145,028	-				+1.4
3,145,028	-				+0.5
3,145,070	+		Sama_2626	0.24	+0.2
3,145,070	+		Sama_2626	0.24	+0.9
3,145,070	+		Sama_2626	0.24	-0.9
3,145,071	-		Sama_2626	0.25	-0.1
3,145,208	+				-1.4
3,145,208	+				-2.1
3,145,208	+				+0.5
3,145,209	-				-0.6
3,145,216	-				+0.2
3,145,241	+				-1.9
3,145,241	+				-1.2
3,145,242	-				+0.6
3,145,259	+				-0.2
3,145,259	+				+1.0
3,145,260	-				+1.2
3,145,260	-				+0.4
3,145,281	+				-0.3
3,145,281	+				+1.7
3,145,282	-				-0.4
3,145,282	-				-1.7
3,145,282	-				-0.3
3,145,289	+				-0.9
3,145,289	+				+2.6
3,145,290	-				+0.6
3,145,290	-				-0.4
3,145,290	-				-0.8
3,145,290	-				+0.2
3,145,290	-				+0.2
3,145,290	-				+0.4
3,145,290	-				+1.3
3,145,290	-				+0.4
3,145,290	-				+0.2
3,145,290	-				-0.5
3,145,291	+				+0.4
3,145,291	+				+1.7
3,145,292	-				+0.6
3,145,292	-				-2.2
3,145,292	-				-1.9
3,145,310	+				+0.8
3,145,360	+				+0.3
3,145,361	-				+0.2
3,145,361	-				+0.9
3,145,376	+				+0.4
3,145,376	+				-0.6
3,145,377	-				+2.2
3,145,441	+				+0.9
3,145,441	+				+1.0
3,145,512	+				+0.2
3,145,513	-				-1.8
3,145,540	-				-0.4
3,145,600	+		Sama_2627	0.13	+0.4
3,145,601	-		Sama_2627	0.13	-0.3
3,145,601	-		Sama_2627	0.13	+1.1
3,145,631	+		Sama_2627	0.14	+0.3
3,145,631	+		Sama_2627	0.14	-2.2
3,145,631	+		Sama_2627	0.14	+0.6
3,145,632	-		Sama_2627	0.14	-0.2
3,145,632	-		Sama_2627	0.14	+1.8
3,145,632	-		Sama_2627	0.14	+0.3
3,145,632	-		Sama_2627	0.14	+0.7
3,145,632	-		Sama_2627	0.14	-1.4
3,145,632	-		Sama_2627	0.14	-0.6
3,145,632	-		Sama_2627	0.14	+1.2
3,145,632	-		Sama_2627	0.14	+0.8
3,145,632	-		Sama_2627	0.14	+1.0
3,145,632	-		Sama_2627	0.14	-0.0
3,145,632	-		Sama_2627	0.14	-0.8
3,145,642	+		Sama_2627	0.14	+0.8
3,145,643	-		Sama_2627	0.14	-2.9
3,145,643	-		Sama_2627	0.14	-0.3
3,145,652	-		Sama_2627	0.15	-0.8
3,145,652	-		Sama_2627	0.15	-0.4
3,145,653	+		Sama_2627	0.15	-0.8
3,145,653	+		Sama_2627	0.15	-0.1
3,145,653	+		Sama_2627	0.15	+0.6
3,145,653	+		Sama_2627	0.15	-0.1
3,145,653	+		Sama_2627	0.15	+0.3
3,145,653	+		Sama_2627	0.15	-0.9
3,145,734	+		Sama_2627	0.18	+0.4
3,145,734	+		Sama_2627	0.18	+2.3
3,145,735	-		Sama_2627	0.18	+0.2
3,145,799	-		Sama_2627	0.21	+0.9
3,145,807	+		Sama_2627	0.22	+0.3
3,145,812	-		Sama_2627	0.22	-0.1
3,145,812	-		Sama_2627	0.22	-1.8
3,145,842	-		Sama_2627	0.23	-0.1
3,145,862	-		Sama_2627	0.24	+0.3
3,145,882	+		Sama_2627	0.25	+0.9
3,145,882	+		Sama_2627	0.25	+0.6
3,145,883	-		Sama_2627	0.25	+0.9
3,145,968	+		Sama_2627	0.29	-1.1
3,145,968	+		Sama_2627	0.29	+0.4
3,145,990	+		Sama_2627	0.30	-0.8
3,145,991	-		Sama_2627	0.30	-0.4
3,145,991	-		Sama_2627	0.30	-1.2
3,146,016	+		Sama_2627	0.31	+0.3