Strain Fitness in Shewanella amazonensis SB2B around Sama_2265

Experiment: Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.004 mg/ml
2,730,104	-				+1.1
2,730,138	-				-1.1
2,730,138	-				+0.2
2,730,145	-				-2.2
2,730,145	-				+0.2
2,730,145	-				-0.4
2,730,145	-				+0.6
2,730,152	-				+0.1
2,730,152	-				+0.3
2,730,152	-				+1.0
2,730,152	-				-2.0
2,730,152	-				+1.8
2,730,152	-				-1.0
2,730,159	-				-1.8
2,730,159	-				-0.3
2,730,159	-				-2.9
2,730,159	-				+0.3
2,730,159	-				+0.3
2,730,159	-				-0.7
2,730,166	-				+1.8
2,730,166	-				-1.9
2,730,166	-				-1.1
2,730,214	-				-0.2
2,730,214	-				-1.2
2,730,247	-				-0.8
2,730,247	-				-0.1
2,730,305	-				+0.9
2,730,376	-				+1.5
2,730,391	-				+1.1
2,730,463	-				+1.0
2,730,463	-				+1.1
2,730,481	-				+1.1
2,730,528	+				-0.5
2,730,551	-				-0.1
2,730,587	+				+2.8
2,730,606	-				-0.1
2,730,613	-				-1.5
2,730,647	+				-0.3
2,730,647	+				-0.1
2,730,661	+				+1.1
2,730,703	-				-0.7
2,730,703	-				-0.0
2,730,703	-				+1.2
2,730,703	-				+0.7
2,730,703	-				-0.4
2,730,704	+				-0.5
2,730,704	+				+0.9
2,730,704	+				+0.3
2,730,704	+				+0.8
2,730,704	+				+0.9
2,730,704	+				+0.9
2,730,705	-				+1.8
2,730,705	-				-0.5
2,730,713	+				+3.0
2,730,714	-				-0.5
2,730,714	-				+1.0
2,730,714	-				+1.2
2,730,753	-		Sama_2265	0.12	+0.3
2,730,782	+		Sama_2265	0.18	-0.7
2,730,987	+		Sama_2265	0.58	+0.5
2,730,988	-		Sama_2265	0.59	+1.4
2,730,988	-		Sama_2265	0.59	+0.7
2,730,988	-		Sama_2265	0.59	+1.5
2,730,988	-		Sama_2265	0.59	+0.5
2,730,997	-		Sama_2265	0.60	+2.3
2,730,997	-		Sama_2265	0.60	+0.5
2,730,997	-		Sama_2265	0.60	+0.2
2,730,997	-		Sama_2265	0.60	-0.1
2,731,030	-		Sama_2265	0.67	+0.5
2,731,034	-		Sama_2265	0.68	+0.8
2,731,065	+		Sama_2265	0.74	-0.1
2,731,065	+		Sama_2265	0.74	+1.7
2,731,065	+		Sama_2265	0.74	+1.2
2,731,066	-		Sama_2265	0.74	+1.8
2,731,066	-		Sama_2265	0.74	+1.0
2,731,066	-		Sama_2265	0.74	+0.7
2,731,066	-		Sama_2265	0.74	+0.5
2,731,087	-		Sama_2265	0.78	+1.4
2,731,094	+		Sama_2265	0.80	+0.1
2,731,094	+		Sama_2265	0.80	-2.4
2,731,094	+		Sama_2265	0.80	+1.5
2,731,095	-		Sama_2265	0.80	+1.6
2,731,095	-		Sama_2265	0.80	-0.5
2,731,095	-		Sama_2265	0.80	+1.5
2,731,095	-		Sama_2265	0.80	-0.1
2,731,095	-		Sama_2265	0.80	+0.5
2,731,112	-		Sama_2265	0.83	-0.5
2,731,170	-				+1.3
2,731,174	+				+1.1
2,731,174	+				+0.5
2,731,174	+				-0.8
2,731,174	+				-0.5
2,731,175	-				+1.8
2,731,175	-				-0.4
2,731,175	-				+1.8
2,731,183	+				+2.0
2,731,183	+				-1.0
2,731,184	-				+1.8
2,731,198	+				+0.5
2,731,198	+				-0.4
2,731,198	+				+0.5
2,731,198	+				+1.5
2,731,198	+				-1.5
2,731,198	+				+0.6
2,731,198	+				+0.2
2,731,198	+				+0.8
2,731,199	-				+0.9
2,731,199	-				-0.4
2,731,199	-				-1.5
2,731,199	-				+0.3
2,731,199	-				+1.1
2,731,199	-				+1.0
2,731,207	+				-0.3
2,731,208	-				-0.5
2,731,208	-				+1.1
2,731,210	+				+0.3
2,731,210	+				-1.5
2,731,276	+				+2.2
2,731,313	+				-1.5
2,731,379	+				-1.0
2,731,380	-				+0.0
2,731,380	-				+0.1
2,731,384	+				-0.2
2,731,418	+				-0.3
2,731,418	+				-1.4
2,731,418	+				-2.1
2,731,422	+				-0.0
2,731,422	+				+0.5
2,731,422	+				+0.5
2,731,422	+				-0.1
2,731,422	+				-0.0
2,731,422	+				+0.5
2,731,422	+				-0.1
2,731,422	+				-3.0
2,731,422	+				-0.5
2,731,422	+				-0.5
2,731,422	+				-1.5
2,731,422	+				-0.5
2,731,423	-				+1.5
2,731,423	-				+2.2
2,731,423	-				+4.0
2,731,444	+				-0.5
2,731,453	+				-1.6
2,731,453	+				-0.7
2,731,458	+				-0.3
2,731,517	+				-1.1
2,731,517	+				-0.1
2,731,532	-				+2.5
2,731,588	+				+1.6
2,731,588	+				+1.5
2,731,588	+				-1.5
2,731,588	+				-0.0
2,731,588	+				+1.1
2,731,589	-				+1.5
2,731,606	+				+1.0
2,731,606	+				+1.9
2,731,607	-				+1.4
2,731,621	-				-0.4
2,731,621	-				+1.7
2,731,642	+				+2.7
2,731,642	+				+2.6
2,731,642	+				+1.8
2,731,643	-				+3.6
2,731,713	-				+0.9
2,731,739	+				+3.0
2,731,779	+		Sama_2266	0.11	+2.0
2,731,816	+		Sama_2266	0.13	+1.0
2,731,835	+		Sama_2266	0.14	+1.1
2,731,835	+		Sama_2266	0.14	+3.2
2,731,870	+		Sama_2266	0.17	+2.1
2,731,888	+		Sama_2266	0.18	+3.0
2,731,889	-		Sama_2266	0.18	+0.5
2,731,933	+		Sama_2266	0.21	+1.7
2,731,980	+		Sama_2266	0.24	+1.6
2,731,980	+		Sama_2266	0.24	+1.7
2,731,980	+		Sama_2266	0.24	+2.4
2,731,981	-		Sama_2266	0.24	+2.3
2,731,981	-		Sama_2266	0.24	+1.7
2,731,981	-		Sama_2266	0.24	+1.6
2,732,006	-		Sama_2266	0.26	+2.6
2,732,042	-		Sama_2266	0.29	+2.0
2,732,096	-		Sama_2266	0.32	+2.0
2,732,105	+		Sama_2266	0.33	+2.3
2,732,105	+		Sama_2266	0.33	+2.4
2,732,106	-		Sama_2266	0.33	-0.1
2,732,106	-		Sama_2266	0.33	+1.7
2,732,106	-		Sama_2266	0.33	+1.9
2,732,106	-		Sama_2266	0.33	+1.8
2,732,114	-		Sama_2266	0.33	+1.4
2,732,122	-		Sama_2266	0.34	+2.4
2,732,122	-		Sama_2266	0.34	+2.4
2,732,141	-		Sama_2266	0.35	+1.5
2,732,168	+		Sama_2266	0.37	+1.8
2,732,168	+		Sama_2266	0.37	+2.5
2,732,176	+		Sama_2266	0.38	+3.0
2,732,177	-		Sama_2266	0.38	+1.1
2,732,177	-		Sama_2266	0.38	+0.7