Strain Fitness in Shewanella amazonensis SB2B around Sama_2264

Experiment: Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.004 mg/ml
2,726,823	-				+0.4
2,726,843	-				-0.8
2,726,843	-				+0.5
2,726,843	-				-2.9
2,726,843	-				-3.2
2,726,843	-				+2.6
2,726,847	-				-0.5
2,726,847	-				-0.1
2,726,867	-				-1.9
2,726,889	-				+0.9
2,726,889	-				-1.1
2,726,896	-				-0.0
2,726,903	-				-1.0
2,726,903	-				+0.6
2,726,910	-				-0.5
2,726,917	-				+0.2
2,726,987	-				+1.7
2,726,987	-				+0.0
2,726,987	-				-1.5
2,727,120	-		Sama_2263	0.40	-0.5
2,727,122	-		Sama_2263	0.41	+1.3
2,727,122	-		Sama_2263	0.41	+0.8
2,727,166	-		Sama_2263	0.52	-0.7
2,727,216	-		Sama_2263	0.65	-0.6
2,727,226	-		Sama_2263	0.68	+0.9
2,727,259	-		Sama_2263	0.76	+1.0
2,727,283	-		Sama_2263	0.82	-0.3
2,727,293	-		Sama_2263	0.85	-1.7
2,727,293	-		Sama_2263	0.85	-1.7
2,727,364	-				-2.5
2,727,364	-				-0.1
2,727,381	-				-0.4
2,727,381	-				+0.3
2,727,388	-				+0.0
2,727,388	-				-0.2
2,727,388	-				+0.5
2,727,388	-				+0.1
2,727,388	-				+0.8
2,727,395	-				-0.6
2,727,395	-				-1.3
2,727,402	-				+0.2
2,727,506	+				-1.9
2,727,507	-				-0.9
2,727,507	-				-0.1
2,727,560	-				+0.2
2,727,560	-				-0.1
2,727,567	-				+1.2
2,727,594	-				-1.5
2,730,104	-				+1.1
2,730,138	-				-1.1
2,730,138	-				+0.2
2,730,145	-				-2.2
2,730,145	-				+0.2
2,730,145	-				-0.4
2,730,145	-				+0.6
2,730,152	-				+0.1
2,730,152	-				+0.3
2,730,152	-				+1.0
2,730,152	-				-2.0
2,730,152	-				+1.8
2,730,152	-				-1.0
2,730,159	-				-1.8
2,730,159	-				-0.3
2,730,159	-				-2.9
2,730,159	-				+0.3
2,730,159	-				+0.3
2,730,159	-				-0.7
2,730,166	-				+1.8
2,730,166	-				-1.9
2,730,166	-				-1.1
2,730,214	-				-0.2
2,730,214	-				-1.2
2,730,247	-				-0.8
2,730,247	-				-0.1
2,730,305	-				+0.9
2,730,376	-				+1.5
2,730,391	-				+1.1
2,730,463	-				+1.0
2,730,463	-				+1.1
2,730,481	-				+1.1
2,730,528	+				-0.5
2,730,551	-				-0.1
2,730,587	+				+2.8
2,730,606	-				-0.1
2,730,613	-				-1.5
2,730,647	+				-0.3
2,730,647	+				-0.1
2,730,661	+				+1.1
2,730,703	-				-0.7
2,730,703	-				-0.0
2,730,703	-				+1.2
2,730,703	-				+0.7
2,730,703	-				-0.4
2,730,704	+				-0.5
2,730,704	+				+0.9
2,730,704	+				+0.3
2,730,704	+				+0.8
2,730,704	+				+0.9
2,730,704	+				+0.9
2,730,705	-				+1.8
2,730,705	-				-0.5
2,730,713	+				+3.0
2,730,714	-				-0.5
2,730,714	-				+1.0
2,730,714	-				+1.2
2,730,753	-		Sama_2265	0.12	+0.3
2,730,782	+		Sama_2265	0.18	-0.7
2,730,987	+		Sama_2265	0.58	+0.5
2,730,988	-		Sama_2265	0.59	+1.4
2,730,988	-		Sama_2265	0.59	+0.7
2,730,988	-		Sama_2265	0.59	+1.5
2,730,988	-		Sama_2265	0.59	+0.5
2,730,997	-		Sama_2265	0.60	+2.3
2,730,997	-		Sama_2265	0.60	+0.5
2,730,997	-		Sama_2265	0.60	+0.2
2,730,997	-		Sama_2265	0.60	-0.1
2,731,030	-		Sama_2265	0.67	+0.5
2,731,034	-		Sama_2265	0.68	+0.8
2,731,065	+		Sama_2265	0.74	-0.1
2,731,065	+		Sama_2265	0.74	+1.7
2,731,065	+		Sama_2265	0.74	+1.2
2,731,066	-		Sama_2265	0.74	+1.8
2,731,066	-		Sama_2265	0.74	+1.0
2,731,066	-		Sama_2265	0.74	+0.7
2,731,066	-		Sama_2265	0.74	+0.5