Strain Fitness in Shewanella amazonensis SB2B around Sama_1185

Experiment: Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.004 mg/ml
1,448,126	+		Sama_1184	0.43	-0.3
1,448,127	-		Sama_1184	0.43	+0.1
1,448,188	-		Sama_1184	0.47	+0.1
1,448,285	+		Sama_1184	0.53	+0.9
1,448,286	-		Sama_1184	0.53	-1.8
1,448,338	+		Sama_1184	0.56	+1.1
1,448,339	-		Sama_1184	0.56	-1.2
1,448,370	+		Sama_1184	0.58	-0.1
1,448,468	+		Sama_1184	0.63	+1.1
1,448,543	+		Sama_1184	0.68	+0.2
1,448,557	-		Sama_1184	0.69	+0.5
1,448,572	+		Sama_1184	0.69	-0.7
1,448,604	+		Sama_1184	0.71	+0.9
1,448,605	-		Sama_1184	0.71	-0.4
1,448,607	+		Sama_1184	0.72	-0.3
1,448,607	+		Sama_1184	0.72	-1.5
1,448,686	-		Sama_1184	0.76	+0.3
1,448,772	+		Sama_1184	0.81	-1.0
1,448,872	+		Sama_1184	0.87	-0.5
1,448,872	+		Sama_1184	0.87	+0.3
1,448,873	-		Sama_1184	0.87	+1.0
1,449,139	+				-0.5
1,449,139	+				-0.7
1,449,301	+		Sama_1185	0.20	+0.3
1,449,301	+		Sama_1185	0.20	-0.5
1,449,301	+		Sama_1185	0.20	+0.5
1,449,311	-		Sama_1185	0.21	+0.5
1,449,395	+		Sama_1185	0.29	-1.5
1,449,395	+		Sama_1185	0.29	-0.3
1,449,395	+		Sama_1185	0.29	-1.3
1,449,396	-		Sama_1185	0.29	+0.8
1,449,411	+		Sama_1185	0.31	-0.7
1,449,470	+		Sama_1185	0.36	+0.5
1,449,470	+		Sama_1185	0.36	-2.3
1,449,471	-		Sama_1185	0.36	-1.5
1,449,478	+		Sama_1185	0.37	+0.2
1,449,536	+		Sama_1185	0.43	-0.5
1,449,560	+		Sama_1185	0.45	-0.7
1,449,560	+		Sama_1185	0.45	-2.0
1,449,560	+		Sama_1185	0.45	-0.6
1,449,646	+		Sama_1185	0.53	-0.7
1,449,646	+		Sama_1185	0.53	-1.7
1,449,646	+		Sama_1185	0.53	-1.1
1,449,646	+		Sama_1185	0.53	-1.3
1,449,646	+		Sama_1185	0.53	+0.5
1,449,745	+		Sama_1185	0.62	-0.2
1,449,753	-		Sama_1185	0.63	+0.1
1,449,753	-		Sama_1185	0.63	+0.3
1,449,941	+		Sama_1185	0.81	+1.9
1,449,941	+		Sama_1185	0.81	-0.5
1,449,942	-		Sama_1185	0.81	-0.5
1,449,971	+		Sama_1185	0.84	+1.1
1,449,971	+		Sama_1185	0.84	-0.3
1,449,971	+		Sama_1185	0.84	-0.7
1,449,972	-		Sama_1185	0.84	-1.1
1,449,972	-		Sama_1185	0.84	-3.3
1,449,973	+		Sama_1185	0.84	-2.3
1,450,046	+				+0.3
1,450,046	+				+1.3
1,450,074	+				-0.2
1,450,139	+				-2.8
1,450,148	+				+0.6
1,450,149	-				+0.9
1,450,149	-				-1.6
1,450,151	+				+0.9
1,450,151	+				-0.4
1,450,151	+				-1.8
1,450,151	+				+0.8
1,450,151	+				+1.0
1,450,151	+				-2.5
1,450,152	-				-1.5
1,450,152	-				+0.4
1,450,222	+				+1.5
1,450,222	+				-0.3
1,450,223	-				+0.3
1,450,228	-				-1.1
1,450,255	-				+0.9
1,450,271	+				-0.5
1,450,271	+				+0.4
1,450,272	-				-0.1
1,450,303	-				-0.6
1,450,303	-				+1.2
1,450,315	-				-0.7
1,450,315	-				-0.5
1,450,384	-				-1.3
1,450,404	-		Sama_1186	0.11	-1.5
1,450,404	-		Sama_1186	0.11	+0.5
1,450,425	+		Sama_1186	0.13	-0.5
1,450,436	-		Sama_1186	0.14	-0.0
1,450,493	+		Sama_1186	0.19	-1.2
1,450,563	+		Sama_1186	0.24	-0.4
1,450,564	-		Sama_1186	0.25	-0.7
1,450,564	-		Sama_1186	0.25	-0.7
1,450,564	-		Sama_1186	0.25	+0.5
1,450,564	-		Sama_1186	0.25	+0.2
1,450,564	-		Sama_1186	0.25	+1.5
1,450,581	+		Sama_1186	0.26	+0.8
1,450,801	-		Sama_1186	0.44	+0.9
1,450,801	-		Sama_1186	0.44	-2.4
1,450,818	-		Sama_1186	0.46	+1.3
1,450,818	-		Sama_1186	0.46	-1.1
1,450,859	+		Sama_1186	0.49	-0.4
1,450,860	-		Sama_1186	0.49	-1.4
1,450,865	+		Sama_1186	0.50	-0.5
1,450,866	-		Sama_1186	0.50	-0.3
1,450,866	-		Sama_1186	0.50	+0.3
1,450,866	-		Sama_1186	0.50	-1.0
1,450,874	+		Sama_1186	0.50	+0.1
1,450,874	+		Sama_1186	0.50	+1.1
1,451,090	+		Sama_1186	0.69	+0.7
1,451,090	+		Sama_1186	0.69	-0.7
1,451,121	+		Sama_1186	0.71	-0.0
1,451,139	+		Sama_1186	0.73	+0.7
1,451,140	-		Sama_1186	0.73	-2.1