Strain Fitness in Shewanella amazonensis SB2B around Sama_0936

Experiment: Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.004 mg/ml
1,128,627	+		Sama_0934	0.61	+1.1
1,128,627	+		Sama_0934	0.61	-0.7
1,128,627	+		Sama_0934	0.61	+0.2
1,128,627	+		Sama_0934	0.61	+0.3
1,128,627	+		Sama_0934	0.61	+1.0
1,128,660	-		Sama_0934	0.68	-0.5
1,128,696	+		Sama_0934	0.75	+0.4
1,128,716	+		Sama_0934	0.79	+0.2
1,128,716	+		Sama_0934	0.79	-1.2
1,128,716	+		Sama_0934	0.79	-0.2
1,128,726	+		Sama_0934	0.81	+1.6
1,128,726	+		Sama_0934	0.81	-0.8
1,128,726	+		Sama_0934	0.81	+1.2
1,128,727	-		Sama_0934	0.81	-3.1
1,128,735	-		Sama_0934	0.82	+0.3
1,128,762	+		Sama_0934	0.88	+0.9
1,128,762	+		Sama_0934	0.88	+0.1
1,128,762	+		Sama_0934	0.88	-1.7
1,128,763	-		Sama_0934	0.88	-0.0
1,128,763	-		Sama_0934	0.88	-1.2
1,128,763	-		Sama_0934	0.88	+0.3
1,128,789	+				+0.5
1,128,795	+				-0.9
1,128,796	-				-0.8
1,128,796	-				+1.2
1,128,803	+				-0.2
1,128,803	+				+0.5
1,128,803	+				+0.2
1,128,824	+				-0.4
1,128,840	+				+0.3
1,128,840	+				+0.2
1,128,840	+				-0.0
1,128,841	-				-0.4
1,128,841	-				-0.7
1,128,841	-				-0.2
1,128,841	-				-0.4
1,128,897	+				-0.5
1,128,898	-				+0.8
1,128,898	-				+1.1
1,128,899	+				+0.1
1,128,900	-				+0.6
1,128,900	-				-1.4
1,128,930	+				-0.2
1,128,930	+				-0.1
1,128,931	-				-0.1
1,128,932	+				-1.6
1,128,932	+				-0.2
1,128,932	+				+0.6
1,128,933	-				+0.6
1,128,933	-				-0.4
1,128,934	+				-0.0
1,128,934	+				-0.9
1,128,934	+				-0.2
1,128,934	+				+2.3
1,128,935	-				-2.4
1,128,935	-				-1.8
1,128,947	+				+0.4
1,128,953	+				-1.7
1,128,953	+				-0.9
1,128,966	+				+1.1
1,128,984	+				-2.8
1,128,998	+				-0.7
1,128,998	+				+1.6
1,128,999	-				-0.8
1,128,999	-				-0.0
1,129,002	-				+0.8
1,129,006	-				+0.6
1,129,006	-				-0.0
1,129,031	+				-0.3
1,129,177	+		Sama_0935	0.39	-1.4
1,129,177	+		Sama_0935	0.39	+0.2
1,129,179	+		Sama_0935	0.40	-1.4
1,129,194	+		Sama_0935	0.44	+0.6
1,129,194	+		Sama_0935	0.44	-1.0
1,129,194	+		Sama_0935	0.44	-1.4
1,129,194	+		Sama_0935	0.44	+1.1
1,129,194	+		Sama_0935	0.44	-2.3
1,129,194	+		Sama_0935	0.44	+1.8
1,129,194	+		Sama_0935	0.44	-0.7
1,129,194	+		Sama_0935	0.44	-0.9
1,129,195	-		Sama_0935	0.45	-1.8
1,129,195	-		Sama_0935	0.45	-1.8
1,129,196	+		Sama_0935	0.45	-1.4
1,129,196	+		Sama_0935	0.45	+0.4
1,129,196	+		Sama_0935	0.45	-0.2
1,129,196	+		Sama_0935	0.45	-0.2
1,129,196	+		Sama_0935	0.45	-2.4
1,129,197	-		Sama_0935	0.45	-1.4
1,129,236	-		Sama_0935	0.57	-0.9
1,129,253	-		Sama_0935	0.62	+0.1
1,129,273	+		Sama_0935	0.68	-1.1
1,129,274	-		Sama_0935	0.68	-0.4
1,129,274	-		Sama_0935	0.68	+1.6
1,129,520	+				+0.2
1,129,521	-				-0.5
1,129,521	-				+0.1
1,129,552	+				+1.1
1,129,552	+				+0.4
1,129,552	+				+0.1
1,129,553	-				-1.6
1,129,585	+				+1.2
1,129,585	+				-1.3
1,129,588	+				-0.3
1,129,588	+				+0.1
1,129,588	+				+1.7
1,129,595	+				+0.4
1,129,595	+				-0.1
1,129,596	-				-0.1
1,129,596	-				-2.4
1,129,597	+				-1.3
1,129,597	+				+0.2
1,129,597	+				-1.2
1,129,597	+				-0.2
1,129,597	+				-1.6
1,129,597	+				+0.3
1,129,597	+				+0.6
1,129,597	+				+0.0
1,129,598	-				-0.4
1,129,598	-				-0.5
1,129,598	-				+1.3
1,129,598	-				-1.0
1,129,598	-				-0.1
1,129,598	-				-1.4
1,129,598	-				-1.8
1,129,598	-				+0.2
1,129,598	-				+0.1
1,129,618	+				+0.3
1,129,618	+				-0.0
1,129,619	-				-1.6
1,129,624	+				-2.1
1,129,624	+				-2.0
1,129,624	+				-0.9
1,129,624	+				+1.3
1,129,624	+				-1.9
1,129,625	-				+0.1
1,129,625	-				-0.4
1,129,625	-				-0.9
1,129,625	-				+0.3
1,129,625	-				+1.6
1,129,625	-				+0.5
1,129,625	-				-3.4
1,129,711	+				+0.8
1,129,711	+				-1.8
1,129,712	-				+0.8
1,129,715	+				+0.2
1,129,715	+				-1.0
1,129,715	+				-1.1
1,129,715	+				-1.4
1,129,715	+				+0.6
1,129,716	-				+1.6
1,129,716	-				+0.9
1,129,730	+				+0.9
1,129,742	+		Sama_0936	0.11	-0.4
1,129,742	+		Sama_0936	0.11	+1.0
1,129,742	+		Sama_0936	0.11	-1.0
1,129,742	+		Sama_0936	0.11	-0.5
1,129,757	-		Sama_0936	0.12	-0.1
1,129,757	-		Sama_0936	0.12	+0.1
1,129,757	-		Sama_0936	0.12	-0.7
1,129,771	+		Sama_0936	0.13	+0.1
1,129,771	+		Sama_0936	0.13	-0.1
1,129,772	-		Sama_0936	0.13	+0.2
1,129,772	-		Sama_0936	0.13	+1.4
1,129,893	+		Sama_0936	0.23	-0.9
1,129,933	+		Sama_0936	0.26	+0.1
1,129,933	+		Sama_0936	0.26	+0.3
1,129,934	-		Sama_0936	0.26	+0.8
1,129,934	-		Sama_0936	0.26	+0.1
1,129,938	+		Sama_0936	0.26	-0.2
1,129,938	+		Sama_0936	0.26	-0.7
1,129,938	+		Sama_0936	0.26	-0.0
1,129,938	+		Sama_0936	0.26	-0.6
1,129,938	+		Sama_0936	0.26	-0.9
1,129,938	+		Sama_0936	0.26	+0.6
1,129,938	+		Sama_0936	0.26	-0.3
1,129,938	+		Sama_0936	0.26	+0.0
1,129,938	+		Sama_0936	0.26	-0.1
1,129,938	+		Sama_0936	0.26	+0.8
1,129,939	-		Sama_0936	0.26	+0.4
1,129,939	-		Sama_0936	0.26	-0.5
1,129,939	-		Sama_0936	0.26	+0.1
1,129,939	-		Sama_0936	0.26	+0.6
1,129,939	-		Sama_0936	0.26	+0.5
1,129,939	-		Sama_0936	0.26	-0.1
1,129,939	-		Sama_0936	0.26	-0.0
1,129,945	-		Sama_0936	0.27	-0.7
1,130,010	-		Sama_0936	0.32	+0.7
1,130,010	-		Sama_0936	0.32	+0.1
1,130,109	-		Sama_0936	0.39	+0.5
1,130,216	+		Sama_0936	0.48	-1.2
1,130,217	-		Sama_0936	0.48	+0.8
1,130,217	-		Sama_0936	0.48	+0.1
1,130,218	+		Sama_0936	0.48	+0.6
1,130,218	+		Sama_0936	0.48	+0.3
1,130,218	+		Sama_0936	0.48	+0.1
1,130,218	+		Sama_0936	0.48	+0.4
1,130,218	+		Sama_0936	0.48	+0.1
1,130,218	+		Sama_0936	0.48	-0.7
1,130,218	+		Sama_0936	0.48	-1.0
1,130,218	+		Sama_0936	0.48	+3.7
1,130,218	+		Sama_0936	0.48	-0.3
1,130,218	+		Sama_0936	0.48	-1.0
1,130,218	+		Sama_0936	0.48	-0.2
1,130,218	+		Sama_0936	0.48	+1.4
1,130,218	+		Sama_0936	0.48	+0.2
1,130,218	+		Sama_0936	0.48	+1.1
1,130,218	+		Sama_0936	0.48	+1.0
1,130,218	+		Sama_0936	0.48	-0.7
1,130,219	-		Sama_0936	0.48	+0.7
1,130,219	-		Sama_0936	0.48	+2.6
1,130,219	-		Sama_0936	0.48	+1.2
1,130,219	-		Sama_0936	0.48	-0.8
1,130,219	-		Sama_0936	0.48	+0.8
1,130,219	-		Sama_0936	0.48	+0.9
1,130,219	-		Sama_0936	0.48	+1.3
1,130,219	-		Sama_0936	0.48	+1.1
1,130,219	-		Sama_0936	0.48	-2.0
1,130,219	-		Sama_0936	0.48	+0.2
1,130,219	-		Sama_0936	0.48	+0.9
1,130,219	-		Sama_0936	0.48	-1.6
1,130,219	-		Sama_0936	0.48	+0.1
1,130,225	+		Sama_0936	0.48	+0.2
1,130,226	-		Sama_0936	0.48	+0.8
1,130,303	-		Sama_0936	0.54	-2.6
1,130,303	-		Sama_0936	0.54	+0.2
1,130,314	+		Sama_0936	0.55	-3.7
1,130,314	+		Sama_0936	0.55	+0.3
1,130,314	+		Sama_0936	0.55	+0.8
1,130,314	+		Sama_0936	0.55	+0.1
1,130,315	-		Sama_0936	0.55	+0.2
1,130,315	-		Sama_0936	0.55	-0.3
1,130,315	-		Sama_0936	0.55	+0.8
1,130,315	-		Sama_0936	0.55	+0.1
1,130,357	+		Sama_0936	0.59	-2.1
1,130,357	+		Sama_0936	0.59	+1.1
1,130,357	+		Sama_0936	0.59	+1.1
1,130,357	+		Sama_0936	0.59	+0.6
1,130,378	+		Sama_0936	0.60	-2.4
1,130,390	+		Sama_0936	0.61	+0.6
1,130,449	+		Sama_0936	0.66	+0.6
1,130,490	-		Sama_0936	0.69	+2.4
1,130,490	-		Sama_0936	0.69	+0.6
1,130,513	+		Sama_0936	0.71	-0.8
1,130,513	+		Sama_0936	0.71	+0.2
1,130,513	+		Sama_0936	0.71	-1.4
1,130,513	+		Sama_0936	0.71	-0.7
1,130,513	+		Sama_0936	0.71	+0.3
1,130,513	+		Sama_0936	0.71	-0.5
1,130,513	+		Sama_0936	0.71	+0.8
1,130,514	-		Sama_0936	0.71	+0.1
1,130,514	-		Sama_0936	0.71	-0.4
1,130,514	-		Sama_0936	0.71	+0.6
1,130,514	-		Sama_0936	0.71	+0.1
1,130,517	+		Sama_0936	0.71	-0.3
1,130,517	+		Sama_0936	0.71	+0.2
1,130,517	+		Sama_0936	0.71	+0.7
1,130,518	-		Sama_0936	0.71	+1.6
1,130,609	-		Sama_0936	0.78	-0.2
1,130,609	-		Sama_0936	0.78	+0.3
1,130,609	-		Sama_0936	0.78	+0.1
1,130,610	+		Sama_0936	0.78	+1.3
1,130,611	-		Sama_0936	0.78	-2.4
1,130,611	-		Sama_0936	0.78	-2.4
1,130,623	+		Sama_0936	0.79	+1.0
1,130,623	+		Sama_0936	0.79	-0.4
1,130,624	-		Sama_0936	0.79	-1.0
1,130,670	+		Sama_0936	0.83	+2.0
1,130,670	+		Sama_0936	0.83	-1.6
1,130,683	+		Sama_0936	0.84	+0.0
1,130,684	-		Sama_0936	0.84	+0.8
1,130,728	+		Sama_0936	0.87	+0.0
1,130,748	-		Sama_0936	0.89	+2.0
1,130,771	+				+0.6
1,130,772	-				-0.3
1,130,772	-				+0.6
1,130,772	-				+0.4
1,130,772	-				+1.4
1,130,775	+				+0.7
1,130,775	+				+0.2
1,130,775	+				+1.4
1,130,775	+				+0.9
1,130,775	+				-0.4
1,130,775	+				+0.3
1,130,775	+				+1.0
1,130,775	+				-0.8
1,130,775	+				+1.1
1,130,776	-				+0.5
1,130,776	-				+1.1
1,130,776	-				+1.0
1,130,776	-				+0.2
1,130,776	-				-0.8
1,130,776	-				+1.0
1,130,779	+				-0.2
1,130,779	+				+1.9
1,130,779	+				-0.4
1,130,779	+				+0.6
1,130,779	+				-0.1
1,130,779	+				-0.4
1,130,780	-				-2.2
1,130,780	-				+0.1
1,130,780	-				+0.3
1,130,787	+				+0.6
1,130,788	-				-0.8
1,130,809	+				+0.3
1,130,809	+				-2.4
1,130,809	+				-1.1
1,130,835	+				+0.7
1,130,879	+				+1.2
1,130,879	+				+0.9
1,130,879	+				-0.4
1,130,879	+				-1.2
1,130,880	-				+1.3
1,130,880	-				+0.9
1,130,880	-				+0.0
1,130,880	-				-0.0
1,130,980	-				-1.2
1,131,017	-		Sama_0937	0.11	+1.9
1,131,042	+		Sama_0937	0.14	+0.6
1,131,245	+		Sama_0937	0.34	-0.6
1,131,279	+		Sama_0937	0.37	+0.1
1,131,279	+		Sama_0937	0.37	-3.0
1,131,279	+		Sama_0937	0.37	+0.4
1,131,279	+		Sama_0937	0.37	+0.3
1,131,279	+		Sama_0937	0.37	-0.6
1,131,279	+		Sama_0937	0.37	+0.6
1,131,279	+		Sama_0937	0.37	-1.5
1,131,280	-		Sama_0937	0.37	+0.1
1,131,280	-		Sama_0937	0.37	-1.2
1,131,280	-		Sama_0937	0.37	+0.1
1,131,280	-		Sama_0937	0.37	+0.4
1,131,280	-		Sama_0937	0.37	-1.4
1,131,366	+		Sama_0937	0.46	-1.2
1,131,399	+		Sama_0937	0.49	-1.2
1,131,400	-		Sama_0937	0.49	-0.0
1,131,403	-		Sama_0937	0.49	+0.4
1,131,403	-		Sama_0937	0.49	+0.7
1,131,403	-		Sama_0937	0.49	-0.4
1,131,403	-		Sama_0937	0.49	-1.3
1,131,427	-		Sama_0937	0.52	-0.0
1,131,485	+		Sama_0937	0.57	-0.3
1,131,486	-		Sama_0937	0.58	+0.3
1,131,486	-		Sama_0937	0.58	+0.1
1,131,486	-		Sama_0937	0.58	+1.0
1,131,486	-		Sama_0937	0.58	-0.7
1,131,577	+		Sama_0937	0.67	+0.9
1,131,578	-		Sama_0937	0.67	+1.2
1,131,578	-		Sama_0937	0.67	+0.4
1,131,589	+		Sama_0937	0.68	-1.4
1,131,590	-		Sama_0937	0.68	+0.1
1,131,603	+		Sama_0937	0.69	+0.6
1,131,644	+		Sama_0937	0.73	-3.0
1,131,644	+		Sama_0937	0.73	-0.4
1,131,644	+		Sama_0937	0.73	-2.9
1,131,667	+		Sama_0937	0.75	+0.5
1,131,685	-		Sama_0937	0.77	-0.7
1,131,690	+		Sama_0937	0.78	+0.3
1,131,691	-		Sama_0937	0.78	-0.9
1,131,693	+		Sama_0937	0.78	-0.9
1,131,693	+		Sama_0937	0.78	-0.8
1,131,693	+		Sama_0937	0.78	-0.4
1,131,693	+		Sama_0937	0.78	-2.6
1,131,693	+		Sama_0937	0.78	-0.5
1,131,693	+		Sama_0937	0.78	-1.9
1,131,693	+		Sama_0937	0.78	-1.9
1,131,693	+		Sama_0937	0.78	-0.6
1,131,694	-		Sama_0937	0.78	-0.1
1,131,694	-		Sama_0937	0.78	-0.0
1,131,694	-		Sama_0937	0.78	-1.1
1,131,694	-		Sama_0937	0.78	+0.3
1,131,695	+		Sama_0937	0.78	-2.0
1,131,695	+		Sama_0937	0.78	+0.3
1,131,695	+		Sama_0937	0.78	-0.9
1,131,695	+		Sama_0937	0.78	-0.7
1,131,695	+		Sama_0937	0.78	+0.1
1,131,695	+		Sama_0937	0.78	-0.7
1,131,695	+		Sama_0937	0.78	-1.5
1,131,695	+		Sama_0937	0.78	+0.2
1,131,695	+		Sama_0937	0.78	-0.4
1,131,695	+		Sama_0937	0.78	-1.2
1,131,695	+		Sama_0937	0.78	-0.6
1,131,695	+		Sama_0937	0.78	-1.0
1,131,696	-		Sama_0937	0.78	-0.5
1,131,696	-		Sama_0937	0.78	-0.4
1,131,696	-		Sama_0937	0.78	-0.3
1,131,696	-		Sama_0937	0.78	+0.7
1,131,696	-		Sama_0937	0.78	-0.6
1,131,698	+		Sama_0937	0.79	-0.2
1,131,698	+		Sama_0937	0.79	-0.4
1,131,698	+		Sama_0937	0.79	+1.6
1,131,698	+		Sama_0937	0.79	-0.2
1,131,698	+		Sama_0937	0.79	+1.0
1,131,698	+		Sama_0937	0.79	-1.6
1,131,699	-		Sama_0937	0.79	-0.2
1,131,699	-		Sama_0937	0.79	-1.0
1,131,699	-		Sama_0937	0.79	+2.1
1,131,716	+		Sama_0937	0.80	+0.3
1,131,716	+		Sama_0937	0.80	+0.1
1,131,734	+		Sama_0937	0.82	+0.2
1,131,734	+		Sama_0937	0.82	-0.1
1,131,735	-		Sama_0937	0.82	-0.3
1,131,735	-		Sama_0937	0.82	-2.6
1,131,735	-		Sama_0937	0.82	-1.0
1,131,735	-		Sama_0937	0.82	+0.3
1,131,783	+		Sama_0937	0.87	-0.4
1,131,783	+		Sama_0937	0.87	-0.2
1,131,805	+		Sama_0937	0.89	-0.9
1,131,806	-		Sama_0937	0.89	+0.3
1,131,806	-		Sama_0937	0.89	-2.3
1,131,814	+				-1.4
1,131,814	+				-0.4
1,131,815	-				+0.2
1,131,815	-				+1.3
1,131,815	-				-0.4
1,131,849	+				-0.6
1,131,871	-				+0.6
1,131,884	+				+0.8
1,131,884	+				-1.8
1,131,885	-				+0.7