Strain Fitness in Shewanella amazonensis SB2B around Sama_0016

Experiment: Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.004 mg/ml
13,541	+	recF	Sama_0015	0.23	-0.1
13,542	-	recF	Sama_0015	0.23	-0.1
13,542	-	recF	Sama_0015	0.23	-2.0
13,630	+	recF	Sama_0015	0.31	-3.0
13,630	+	recF	Sama_0015	0.31	-2.1
13,630	+	recF	Sama_0015	0.31	+0.9
13,630	+	recF	Sama_0015	0.31	-2.8
13,630	+	recF	Sama_0015	0.31	-1.9
13,630	+	recF	Sama_0015	0.31	-0.8
13,630	+	recF	Sama_0015	0.31	-1.5
13,630	+	recF	Sama_0015	0.31	-0.3
13,631	-	recF	Sama_0015	0.31	-0.6
13,631	-	recF	Sama_0015	0.31	-0.9
13,631	-	recF	Sama_0015	0.31	-2.0
13,631	-	recF	Sama_0015	0.31	-1.9
13,635	-	recF	Sama_0015	0.31	-1.2
13,635	-	recF	Sama_0015	0.31	+0.0
13,635	-	recF	Sama_0015	0.31	+0.1
13,635	-	recF	Sama_0015	0.31	-1.2
13,647	-	recF	Sama_0015	0.32	-0.9
13,701	-	recF	Sama_0015	0.37	-1.0
13,701	-	recF	Sama_0015	0.37	+0.4
13,754	+	recF	Sama_0015	0.42	-1.1
13,754	+	recF	Sama_0015	0.42	+1.1
13,755	-	recF	Sama_0015	0.42	-0.3
13,838	-	recF	Sama_0015	0.50	-1.4
13,841	+	recF	Sama_0015	0.50	-0.5
13,867	+	recF	Sama_0015	0.53	-1.6
13,867	+	recF	Sama_0015	0.53	-0.8
13,878	+	recF	Sama_0015	0.54	-0.0
13,878	+	recF	Sama_0015	0.54	-0.2
13,878	+	recF	Sama_0015	0.54	+0.4
13,878	+	recF	Sama_0015	0.54	-0.9
13,878	+	recF	Sama_0015	0.54	-1.1
13,879	-	recF	Sama_0015	0.54	+0.9
13,879	-	recF	Sama_0015	0.54	+0.3
13,879	-	recF	Sama_0015	0.54	-0.7
13,882	+	recF	Sama_0015	0.54	-0.2
13,882	+	recF	Sama_0015	0.54	-0.7
13,882	+	recF	Sama_0015	0.54	-1.0
13,882	+	recF	Sama_0015	0.54	+0.5
13,883	-	recF	Sama_0015	0.54	-1.1
13,883	-	recF	Sama_0015	0.54	-2.0
13,883	-	recF	Sama_0015	0.54	-3.3
13,883	-	recF	Sama_0015	0.54	-0.3
13,883	-	recF	Sama_0015	0.54	+0.8
13,883	-	recF	Sama_0015	0.54	-0.9
13,904	+	recF	Sama_0015	0.56	+0.9
13,904	+	recF	Sama_0015	0.56	+1.2
13,904	+	recF	Sama_0015	0.56	-0.4
13,910	+	recF	Sama_0015	0.57	-1.5
13,910	+	recF	Sama_0015	0.57	-0.7
13,912	+	recF	Sama_0015	0.57	-0.5
13,912	+	recF	Sama_0015	0.57	-2.5
14,007	+	recF	Sama_0015	0.66	-0.2
14,026	+	recF	Sama_0015	0.67	-1.1
14,033	+	recF	Sama_0015	0.68	-0.1
14,033	+	recF	Sama_0015	0.68	-0.7
14,051	+	recF	Sama_0015	0.70	-2.1
14,051	+	recF	Sama_0015	0.70	-0.5
14,078	+	recF	Sama_0015	0.72	+0.9
14,078	+	recF	Sama_0015	0.72	-0.7
14,122	+	recF	Sama_0015	0.76	-0.8
14,162	+	recF	Sama_0015	0.80	-1.7
14,162	+	recF	Sama_0015	0.80	-1.7
14,162	+	recF	Sama_0015	0.80	-1.1
14,190	+	recF	Sama_0015	0.83	-0.1
14,190	+	recF	Sama_0015	0.83	-0.5
14,190	+	recF	Sama_0015	0.83	-1.2
14,190	+	recF	Sama_0015	0.83	-2.1
14,190	+	recF	Sama_0015	0.83	-0.4
14,257	+	recF	Sama_0015	0.89	-1.5
14,257	+	recF	Sama_0015	0.89	+3.1
14,257	+	recF	Sama_0015	0.89	-0.2
14,261	+	recF	Sama_0015	0.89	-0.5
14,261	+	recF	Sama_0015	0.89	+0.2
14,347	+				-0.9
14,347	+				-0.2
14,347	+				+0.4
14,372	+				+1.3
14,372	+				-1.1
14,372	+				-0.3
14,372	+				-1.4
14,376	+				-0.7
14,376	+				+1.0
14,376	+				-0.8
14,376	+				-1.3
16,886	+				+0.5
16,886	+				-2.3
16,886	+				+0.2
16,886	+				-0.1
16,886	+				+0.5
16,887	-				-0.4
16,957	-				-2.4
16,986	+				-0.1
16,986	+				-0.7
16,987	-				-0.4
16,987	-				-0.4
16,987	-				-2.4
16,987	-				+1.5
17,010	+				+1.0
17,010	+				-3.2
17,010	+				+0.5
17,010	+				+2.7
17,010	+				+1.2
17,011	-				-2.8
17,011	-				-1.6
17,021	+				+0.2
17,040	-		Sama_0017	0.12	+0.9
17,064	+		Sama_0017	0.18	+0.6
17,064	+		Sama_0017	0.18	+0.2
17,064	+		Sama_0017	0.18	-0.9
17,064	+		Sama_0017	0.18	-1.0
17,064	+		Sama_0017	0.18	-0.0
17,064	+		Sama_0017	0.18	-0.1
17,064	+		Sama_0017	0.18	-0.5
17,064	+		Sama_0017	0.18	+1.4
17,064	+		Sama_0017	0.18	+0.1
17,065	-		Sama_0017	0.18	+0.6
17,065	-		Sama_0017	0.18	-0.7
17,065	-		Sama_0017	0.18	-0.2
17,065	-		Sama_0017	0.18	+0.5
17,065	-		Sama_0017	0.18	-0.2
17,065	-		Sama_0017	0.18	-0.4
17,065	-		Sama_0017	0.18	+1.1
17,065	-		Sama_0017	0.18	+0.4
17,065	-		Sama_0017	0.18	+0.5
17,065	-		Sama_0017	0.18	-0.5
17,065	-		Sama_0017	0.18	+1.7
17,065	-		Sama_0017	0.18	+0.4
17,065	-		Sama_0017	0.18	+0.6
17,065	-		Sama_0017	0.18	+0.0
17,117	+		Sama_0017	0.31	-0.3
17,118	-		Sama_0017	0.31	+0.1
17,118	-		Sama_0017	0.31	+0.2
17,147	+		Sama_0017	0.39	+0.5
17,148	-		Sama_0017	0.39	-0.7
17,148	-		Sama_0017	0.39	+0.3
17,165	-		Sama_0017	0.43	-0.9
17,165	-		Sama_0017	0.43	-1.8
17,179	+		Sama_0017	0.47	-0.3
17,180	-		Sama_0017	0.47	-0.3
17,180	-		Sama_0017	0.47	-2.1
17,194	+		Sama_0017	0.50	-0.7
17,238	+		Sama_0017	0.61	-2.3
17,238	+		Sama_0017	0.61	+0.5
17,238	+		Sama_0017	0.61	-0.9
17,238	+		Sama_0017	0.61	+0.1
17,238	+		Sama_0017	0.61	-0.4
17,238	+		Sama_0017	0.61	+0.5
17,238	+		Sama_0017	0.61	-2.3
17,238	+		Sama_0017	0.61	+1.5
17,239	-		Sama_0017	0.61	-0.4
17,239	-		Sama_0017	0.61	-0.3
17,239	-		Sama_0017	0.61	-0.5
17,239	-		Sama_0017	0.61	-0.9
17,239	-		Sama_0017	0.61	+1.1
17,239	-		Sama_0017	0.61	-2.4
17,253	+		Sama_0017	0.65	+0.7
17,253	+		Sama_0017	0.65	-0.8
17,253	+		Sama_0017	0.65	-0.1
17,253	+		Sama_0017	0.65	-0.4
17,254	-		Sama_0017	0.65	+1.2
17,254	-		Sama_0017	0.65	-0.7
17,254	-		Sama_0017	0.65	-0.6
17,254	-		Sama_0017	0.65	-0.4
17,254	-		Sama_0017	0.65	-1.9
17,254	-		Sama_0017	0.65	-0.5
17,254	-		Sama_0017	0.65	-1.4
17,254	-		Sama_0017	0.65	-1.4
17,254	-		Sama_0017	0.65	-1.7
17,300	+		Sama_0017	0.77	+1.7
17,300	+		Sama_0017	0.77	-0.7
17,301	-		Sama_0017	0.77	+2.0
17,301	-		Sama_0017	0.77	-0.2
17,301	-		Sama_0017	0.77	-1.4
17,318	+		Sama_0017	0.81	-2.5
17,319	-		Sama_0017	0.81	-0.7
17,319	-		Sama_0017	0.81	+0.2
17,319	-		Sama_0017	0.81	+1.3
17,322	+		Sama_0017	0.82	-0.1
17,333	+		Sama_0017	0.85	-3.5
17,378	+				-0.1
17,379	-				+0.4
17,379	-				-2.1
17,379	-				+1.4
17,491	+		Sama_0018	0.15	+0.5
17,491	+		Sama_0018	0.15	-0.1
17,491	+		Sama_0018	0.15	+1.9
17,491	+		Sama_0018	0.15	-0.3
17,491	+		Sama_0018	0.15	+1.0
17,491	+		Sama_0018	0.15	-1.2
17,491	+		Sama_0018	0.15	-0.6
17,491	+		Sama_0018	0.15	+1.4
17,491	+		Sama_0018	0.15	-2.4
17,491	+		Sama_0018	0.15	+2.1
17,491	+		Sama_0018	0.15	-0.7
17,491	+		Sama_0018	0.15	-0.7
17,491	+		Sama_0018	0.15	-2.1
17,492	-		Sama_0018	0.15	+0.5
17,492	-		Sama_0018	0.15	+0.2
17,492	-		Sama_0018	0.15	+1.8
17,492	-		Sama_0018	0.15	-0.1
17,540	-		Sama_0018	0.22	+0.1
17,595	+		Sama_0018	0.31	-1.5
17,595	+		Sama_0018	0.31	-0.7
17,595	+		Sama_0018	0.31	+0.3
17,596	-		Sama_0018	0.31	+1.0
17,596	-		Sama_0018	0.31	-1.2
17,596	-		Sama_0018	0.31	-0.7
17,704	-		Sama_0018	0.48	-1.0
17,704	-		Sama_0018	0.48	+0.4
17,863	-		Sama_0018	0.72	+0.4
17,863	-		Sama_0018	0.72	-0.8
17,880	-		Sama_0018	0.74	-1.5