Strain Fitness in Shewanella amazonensis SB2B around Sama_2974

Experiment: Benzalkonium Chloride 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.002 mg/ml
3,543,999	+		Sama_2973	0.59	-0.6
3,543,999	+		Sama_2973	0.59	-0.4
3,543,999	+		Sama_2973	0.59	+0.1
3,544,000	-		Sama_2973	0.59	+0.9
3,544,067	+		Sama_2973	0.62	-0.2
3,544,067	+		Sama_2973	0.62	-0.8
3,544,067	+		Sama_2973	0.62	-2.9
3,544,068	-		Sama_2973	0.62	-3.6
3,544,068	-		Sama_2973	0.62	+0.1
3,544,068	-		Sama_2973	0.62	+0.5
3,544,226	+		Sama_2973	0.69	+0.4
3,544,277	+		Sama_2973	0.72	+0.9
3,544,277	+		Sama_2973	0.72	-0.3
3,544,277	+		Sama_2973	0.72	-0.4
3,544,278	-		Sama_2973	0.72	-1.7
3,544,278	-		Sama_2973	0.72	+0.3
3,544,278	-		Sama_2973	0.72	-0.4
3,544,278	-		Sama_2973	0.72	+0.8
3,544,295	+		Sama_2973	0.72	-0.4
3,544,295	+		Sama_2973	0.72	-0.1
3,544,296	-		Sama_2973	0.72	-0.0
3,544,303	+		Sama_2973	0.73	-0.1
3,544,303	+		Sama_2973	0.73	+0.1
3,544,303	+		Sama_2973	0.73	-0.4
3,544,303	+		Sama_2973	0.73	-0.4
3,544,304	-		Sama_2973	0.73	-2.3
3,544,304	-		Sama_2973	0.73	+0.4
3,544,304	-		Sama_2973	0.73	+0.8
3,544,304	-		Sama_2973	0.73	+0.8
3,544,356	+		Sama_2973	0.75	+1.0
3,544,391	-		Sama_2973	0.77	+0.6
3,544,417	+		Sama_2973	0.78	+0.4
3,544,417	+		Sama_2973	0.78	+0.8
3,544,417	+		Sama_2973	0.78	+1.6
3,544,417	+		Sama_2973	0.78	-1.2
3,544,417	+		Sama_2973	0.78	+1.2
3,544,418	-		Sama_2973	0.78	-1.6
3,544,447	+		Sama_2973	0.79	+0.2
3,544,447	+		Sama_2973	0.79	-0.8
3,544,448	-		Sama_2973	0.79	-0.4
3,544,448	-		Sama_2973	0.79	-0.6
3,544,619	-		Sama_2973	0.87	-2.1
3,544,619	-		Sama_2973	0.87	-0.2
3,544,640	+		Sama_2973	0.88	-1.1
3,544,640	+		Sama_2973	0.88	-0.1
3,544,641	-		Sama_2973	0.88	+0.2
3,544,653	+		Sama_2973	0.89	+0.8
3,544,653	+		Sama_2973	0.89	+0.7
3,544,653	+		Sama_2973	0.89	-0.1
3,544,654	-		Sama_2973	0.89	+0.7
3,544,660	+		Sama_2973	0.89	-0.1
3,544,660	+		Sama_2973	0.89	+0.7
3,544,660	+		Sama_2973	0.89	+0.6
3,544,660	+		Sama_2973	0.89	-2.2
3,544,661	-		Sama_2973	0.89	-0.8
3,544,661	-		Sama_2973	0.89	-0.5
3,544,661	-		Sama_2973	0.89	+1.0
3,544,661	-		Sama_2973	0.89	-0.6
3,544,716	+				-0.2
3,544,716	+				-0.9
3,544,717	-				-0.3
3,544,720	+				+0.2
3,544,721	-				-1.2
3,544,721	-				-0.1
3,544,856	+				+1.2
3,544,886	+				-0.8
3,544,887	-				-1.2
3,544,887	-				+0.2
3,544,903	+				+0.0
3,544,903	+				-1.8
3,544,903	+				-1.2
3,544,903	+				+0.2
3,544,904	-				-1.4
3,544,904	-				+0.9
3,544,904	-				+2.5
3,544,904	-				-1.5
3,544,904	-				-1.1
3,544,904	-				-0.1
3,544,904	-				+0.3
3,544,904	-				-0.8
3,544,926	+				+1.8
3,544,927	-				-0.1
3,544,933	+				+0.3
3,544,953	+				-2.5
3,544,953	+				+1.7
3,544,953	+				+0.8
3,544,953	+				+1.7
3,544,953	+				+0.2
3,544,954	-				-2.0
3,544,954	-				-2.0
3,544,955	+				+0.9
3,544,955	+				-1.2
3,544,955	+				+0.7
3,544,955	+				+0.1
3,544,956	-				-0.2
3,544,956	-				-0.6
3,544,971	-				-0.4
3,544,978	+				+0.9
3,544,978	+				+0.7
3,544,989	-				-0.5
3,544,996	+				+0.4
3,544,997	-				+0.7
3,544,997	-				-0.4
3,544,997	-				+0.9
3,544,997	-				-0.8
3,544,997	-				+0.6
3,544,997	-				+0.6
3,545,016	+				-2.3
3,545,017	-				-0.7
3,545,017	-				+1.1
3,545,022	+				+0.6
3,545,062	+		Sama_2974	0.12	+0.6
3,545,062	+		Sama_2974	0.12	+0.2
3,545,062	+		Sama_2974	0.12	-0.4
3,545,062	+		Sama_2974	0.12	+0.2
3,545,062	+		Sama_2974	0.12	+0.2
3,545,063	-		Sama_2974	0.12	+1.4
3,545,063	-		Sama_2974	0.12	-0.8
3,545,063	-		Sama_2974	0.12	-1.6
3,545,063	-		Sama_2974	0.12	+0.2
3,545,063	-		Sama_2974	0.12	-0.1
3,545,063	-		Sama_2974	0.12	+2.0
3,545,063	-		Sama_2974	0.12	+0.2
3,545,063	-		Sama_2974	0.12	+0.7
3,545,063	-		Sama_2974	0.12	-0.3
3,545,063	-		Sama_2974	0.12	-0.7
3,545,063	-		Sama_2974	0.12	-2.0
3,545,119	+		Sama_2974	0.23	-0.9
3,545,120	-		Sama_2974	0.23	-0.8
3,545,250	+		Sama_2974	0.48	-0.8
3,545,250	+		Sama_2974	0.48	+0.9
3,545,251	-		Sama_2974	0.48	-0.7
3,545,297	+		Sama_2974	0.57	-1.3
3,545,357	-		Sama_2974	0.68	+1.0
3,545,365	+		Sama_2974	0.70	-1.1
3,545,427	+		Sama_2974	0.81	-0.9
3,545,447	-		Sama_2974	0.85	+0.1
3,545,554	+				-0.7
3,545,554	+				-2.2
3,545,554	+				+0.6
3,545,554	+				+0.5
3,545,554	+				-0.5
3,545,555	-				+0.2
3,545,555	-				+0.7
3,545,555	-				-2.4
3,545,555	-				+0.6
3,545,555	-				-3.1
3,545,558	+				-1.1
3,545,558	+				-2.0
3,545,558	+				+0.4
3,545,558	+				-0.4
3,545,559	-				+0.4
3,545,559	-				+0.2
3,545,559	-				+0.0
3,545,559	-				-0.0
3,545,559	-				+0.8
3,545,559	-				+0.7
3,545,559	-				+0.2
3,545,559	-				-0.7
3,545,559	-				-3.4
3,545,559	-				-0.4
3,545,576	+				-1.2
3,545,577	-				-0.4
3,545,596	+		Sama_2975	0.14	+0.3
3,545,597	-		Sama_2975	0.14	+1.7
3,545,636	-		Sama_2975	0.22	-1.2
3,545,681	+		Sama_2975	0.31	-1.1
3,545,857	+		Sama_2975	0.66	-0.4
3,545,858	-		Sama_2975	0.66	+0.7
3,545,858	-		Sama_2975	0.66	+1.3
3,545,858	-		Sama_2975	0.66	-1.8
3,545,858	-		Sama_2975	0.66	-0.4
3,545,858	-		Sama_2975	0.66	-0.0
3,545,928	-		Sama_2975	0.81	-1.8
3,545,928	-		Sama_2975	0.81	+1.5
3,545,935	+		Sama_2975	0.82	+1.5
3,545,935	+		Sama_2975	0.82	+0.2
3,545,936	-		Sama_2975	0.82	-0.0
3,545,973	+		Sama_2975	0.90	+0.8
3,545,973	+		Sama_2975	0.90	+1.3
3,545,974	-				+0.6
3,546,011	+				-1.7
3,546,053	-				+0.5
3,546,057	+				+0.1
3,546,057	+				-0.2
3,546,057	+				-0.8
3,546,057	+				+1.0
3,546,057	+				+1.7
3,546,057	+				+0.3
3,546,057	+				+0.6
3,546,057	+				+0.5
3,546,057	+				+2.0
3,546,057	+				-0.6
3,546,057	+				-1.2
3,546,057	+				-0.1
3,546,057	+				+0.2
3,546,057	+				-0.6
3,546,057	+				-1.2
3,546,057	+				-1.3
3,546,057	+				+0.0
3,546,057	+				+0.5
3,546,057	+				-0.5
3,546,057	+				+1.7
3,546,057	+				-0.8
3,546,057	+				+0.2
3,546,058	-				+0.8
3,546,058	-				-3.4
3,546,058	-				+0.2
3,546,058	-				-0.1
3,546,058	-				+0.1
3,546,058	-				-2.6
3,546,058	-				+0.5
3,546,058	-				+1.2
3,546,058	-				+1.0
3,546,058	-				+0.1
3,546,058	-				-0.1
3,546,058	-				-0.4
3,546,058	-				-1.0
3,546,058	-				-0.3
3,546,058	-				+0.0
3,546,058	-				+0.6
3,546,058	-				-2.4
3,546,058	-				-0.3
3,546,058	-				+0.5
3,546,126	+				+1.1
3,546,127	-				+1.4
3,546,132	+				+0.3
3,546,132	+				+0.8
3,546,132	+				-0.6
3,546,132	+				+1.4
3,546,132	+				+1.2
3,546,132	+				-0.7
3,546,132	+				-0.1
3,546,133	-				-1.4
3,546,133	-				-0.5
3,546,133	-				-0.2
3,546,133	-				-0.3
3,546,133	-				+0.4
3,546,133	-				-0.1
3,546,133	-				-0.3
3,546,133	-				+0.4
3,546,238	+				-2.0
3,546,238	+				+0.8
3,546,238	+				+1.2
3,546,239	-				+0.2
3,546,239	-				+0.9
3,546,239	-				-2.4
3,546,239	-				+0.3
3,546,239	-				+0.8
3,546,263	+		Sama_2976	0.10	-1.2
3,546,263	+		Sama_2976	0.10	+0.8
3,546,263	+		Sama_2976	0.10	-1.0
3,546,263	+		Sama_2976	0.10	-1.2
3,546,264	-		Sama_2976	0.10	+0.4
3,546,264	-		Sama_2976	0.10	+0.8
3,546,273	+		Sama_2976	0.11	-1.2
3,546,274	-		Sama_2976	0.11	-0.6
3,546,274	-		Sama_2976	0.11	-1.0
3,546,274	-		Sama_2976	0.11	+0.8
3,546,274	-		Sama_2976	0.11	-0.4
3,546,274	-		Sama_2976	0.11	+1.2
3,546,277	+		Sama_2976	0.11	+0.7
3,546,277	+		Sama_2976	0.11	-0.6
3,546,286	+		Sama_2976	0.12	-0.2
3,546,297	-		Sama_2976	0.13	-0.3
3,546,313	+		Sama_2976	0.14	-0.2
3,546,314	-		Sama_2976	0.14	+0.9
3,546,356	+		Sama_2976	0.18	-0.1
3,546,356	+		Sama_2976	0.18	-0.5
3,546,356	+		Sama_2976	0.18	-0.4
3,546,357	-		Sama_2976	0.18	+1.4
3,546,357	-		Sama_2976	0.18	+3.3
3,546,409	+		Sama_2976	0.22	-0.5
3,546,409	+		Sama_2976	0.22	-0.9
3,546,409	+		Sama_2976	0.22	-1.8
3,546,410	-		Sama_2976	0.22	-0.5
3,546,410	-		Sama_2976	0.22	+0.1
3,546,410	-		Sama_2976	0.22	-0.7
3,546,410	-		Sama_2976	0.22	-1.0
3,546,410	-		Sama_2976	0.22	+1.4
3,546,492	-		Sama_2976	0.29	-1.7
3,546,492	-		Sama_2976	0.29	+1.2
3,546,512	+		Sama_2976	0.31	-3.6
3,546,513	-		Sama_2976	0.31	-0.6