Experiment: Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0908 and Psest_0909 overlap by 1 nucleotides Psest_0909 and Psest_0910 are separated by 51 nucleotides Psest_0910 and Psest_0911 are separated by 94 nucleotides Psest_0911 and Psest_0912 are separated by 208 nucleotides
Psest_0908: Psest_0908 - hypothetical protein, at 986,202 to 986,606
_0908
Psest_0909: Psest_0909 - hypothetical protein, at 986,606 to 986,920
_0909
Psest_0910: Psest_0910 - hypothetical protein, at 986,972 to 987,343
_0910
Psest_0911: Psest_0911 - Inhibitor of the KinA pathway to sporulation, predicted exonuclease, at 987,438 to 988,091
_0911
Psest_0912: Psest_0912 - Tellurite resistance protein TerB., at 988,300 to 990,783
_0912
Position (kb) 987
988
989 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 986.442 kb on + strand, within Psest_0908 at 986.442 kb on + strand, within Psest_0908 at 986.442 kb on + strand, within Psest_0908 at 986.443 kb on - strand, within Psest_0908 at 986.484 kb on - strand, within Psest_0908 at 986.484 kb on - strand, within Psest_0908 at 986.484 kb on - strand, within Psest_0908 at 986.534 kb on + strand, within Psest_0908 at 986.534 kb on + strand, within Psest_0908 at 986.534 kb on + strand, within Psest_0908 at 986.541 kb on + strand, within Psest_0908 at 986.542 kb on - strand, within Psest_0908 at 986.542 kb on - strand, within Psest_0908 at 986.542 kb on - strand, within Psest_0908 at 986.585 kb on + strand at 986.586 kb on - strand at 986.620 kb on - strand at 986.637 kb on + strand at 986.637 kb on + strand at 986.637 kb on + strand at 986.680 kb on + strand, within Psest_0909 at 986.681 kb on - strand, within Psest_0909 at 986.681 kb on - strand, within Psest_0909 at 986.814 kb on - strand, within Psest_0909 at 986.835 kb on + strand, within Psest_0909 at 986.835 kb on + strand, within Psest_0909 at 986.835 kb on + strand, within Psest_0909 at 986.835 kb on + strand, within Psest_0909 at 986.835 kb on + strand, within Psest_0909 at 986.836 kb on - strand, within Psest_0909 at 986.836 kb on - strand, within Psest_0909 at 986.836 kb on - strand, within Psest_0909 at 986.836 kb on - strand, within Psest_0909 at 986.836 kb on - strand, within Psest_0909 at 986.836 kb on - strand, within Psest_0909 at 986.836 kb on - strand, within Psest_0909 at 986.873 kb on + strand, within Psest_0909 at 986.873 kb on + strand, within Psest_0909 at 986.873 kb on + strand, within Psest_0909 at 986.874 kb on - strand, within Psest_0909 at 986.888 kb on - strand, within Psest_0909 at 986.904 kb on - strand at 987.012 kb on + strand, within Psest_0910 at 987.013 kb on - strand, within Psest_0910 at 987.013 kb on - strand, within Psest_0910 at 987.041 kb on - strand, within Psest_0910 at 987.083 kb on + strand, within Psest_0910 at 987.140 kb on + strand, within Psest_0910 at 987.140 kb on + strand, within Psest_0910 at 987.140 kb on + strand, within Psest_0910 at 987.141 kb on - strand, within Psest_0910 at 987.141 kb on - strand, within Psest_0910 at 987.183 kb on + strand, within Psest_0910 at 987.183 kb on + strand, within Psest_0910 at 987.184 kb on - strand, within Psest_0910 at 987.184 kb on - strand, within Psest_0910 at 987.242 kb on + strand, within Psest_0910 at 987.242 kb on + strand, within Psest_0910 at 987.242 kb on + strand, within Psest_0910 at 987.242 kb on + strand, within Psest_0910 at 987.242 kb on + strand, within Psest_0910 at 987.242 kb on + strand, within Psest_0910 at 987.242 kb on + strand, within Psest_0910 at 987.242 kb on + strand, within Psest_0910 at 987.243 kb on - strand, within Psest_0910 at 987.243 kb on - strand, within Psest_0910 at 987.243 kb on - strand, within Psest_0910 at 987.243 kb on - strand, within Psest_0910 at 987.243 kb on - strand, within Psest_0910 at 987.315 kb on + strand at 987.362 kb on - strand at 987.362 kb on - strand at 987.364 kb on + strand at 987.364 kb on + strand at 987.365 kb on - strand at 987.367 kb on - strand at 987.405 kb on + strand at 987.406 kb on - strand at 987.406 kb on - strand at 987.406 kb on - strand at 987.445 kb on + strand at 987.503 kb on - strand at 987.537 kb on + strand, within Psest_0911 at 987.577 kb on + strand, within Psest_0911 at 987.577 kb on + strand, within Psest_0911 at 987.577 kb on + strand, within Psest_0911 at 987.577 kb on + strand, within Psest_0911 at 987.578 kb on - strand, within Psest_0911 at 987.578 kb on - strand, within Psest_0911 at 987.703 kb on + strand, within Psest_0911 at 987.733 kb on + strand, within Psest_0911 at 987.733 kb on + strand, within Psest_0911 at 987.733 kb on + strand, within Psest_0911 at 987.734 kb on - strand, within Psest_0911 at 987.734 kb on - strand, within Psest_0911 at 987.775 kb on + strand, within Psest_0911 at 987.776 kb on - strand, within Psest_0911 at 987.776 kb on - strand, within Psest_0911 at 987.776 kb on - strand, within Psest_0911 at 987.776 kb on - strand, within Psest_0911 at 987.776 kb on - strand, within Psest_0911 at 987.812 kb on + strand, within Psest_0911 at 987.813 kb on - strand, within Psest_0911 at 987.847 kb on - strand, within Psest_0911 at 987.889 kb on + strand, within Psest_0911 at 987.889 kb on + strand, within Psest_0911 at 987.890 kb on - strand, within Psest_0911 at 987.895 kb on + strand, within Psest_0911 at 987.895 kb on + strand, within Psest_0911 at 987.895 kb on + strand, within Psest_0911 at 987.895 kb on + strand, within Psest_0911 at 987.895 kb on + strand, within Psest_0911 at 987.895 kb on + strand, within Psest_0911 at 987.896 kb on - strand, within Psest_0911 at 987.896 kb on - strand, within Psest_0911 at 987.896 kb on - strand, within Psest_0911 at 987.896 kb on - strand, within Psest_0911 at 987.896 kb on - strand, within Psest_0911 at 987.896 kb on - strand, within Psest_0911 at 987.896 kb on - strand, within Psest_0911 at 987.896 kb on - strand, within Psest_0911 at 987.896 kb on - strand, within Psest_0911 at 987.896 kb on - strand, within Psest_0911 at 987.896 kb on - strand, within Psest_0911 at 987.896 kb on - strand, within Psest_0911 at 987.896 kb on - strand, within Psest_0911 at 987.896 kb on - strand, within Psest_0911 at 987.896 kb on - strand, within Psest_0911 at 987.896 kb on - strand, within Psest_0911 at 987.917 kb on + strand, within Psest_0911 at 987.925 kb on + strand, within Psest_0911 at 987.925 kb on + strand, within Psest_0911 at 987.925 kb on + strand, within Psest_0911 at 987.926 kb on - strand, within Psest_0911 at 987.926 kb on - strand, within Psest_0911 at 987.926 kb on - strand, within Psest_0911 at 987.991 kb on + strand, within Psest_0911 at 987.991 kb on + strand, within Psest_0911 at 987.992 kb on - strand, within Psest_0911 at 987.992 kb on - strand, within Psest_0911 at 988.064 kb on - strand at 988.089 kb on + strand at 988.090 kb on - strand at 988.092 kb on + strand at 988.200 kb on - strand at 988.200 kb on - strand at 988.216 kb on + strand at 988.216 kb on + strand at 988.216 kb on + strand at 988.216 kb on + strand at 988.216 kb on + strand at 988.216 kb on + strand at 988.216 kb on + strand at 988.216 kb on + strand at 988.216 kb on + strand at 988.216 kb on + strand at 988.216 kb on + strand at 988.216 kb on + strand at 988.216 kb on + strand at 988.216 kb on + strand at 988.216 kb on + strand at 988.216 kb on + strand at 988.216 kb on + strand at 988.217 kb on - strand at 988.217 kb on - strand at 988.217 kb on - strand at 988.217 kb on - strand at 988.217 kb on - strand at 988.217 kb on - strand at 988.217 kb on - strand at 988.217 kb on - strand at 988.231 kb on + strand at 988.232 kb on - strand at 988.232 kb on - strand at 988.283 kb on + strand at 988.283 kb on + strand at 988.283 kb on + strand at 988.283 kb on + strand at 988.284 kb on - strand at 988.284 kb on - strand at 988.284 kb on - strand at 988.284 kb on - strand at 988.284 kb on - strand at 988.284 kb on - strand at 988.286 kb on - strand at 988.314 kb on + strand at 988.338 kb on - strand at 988.451 kb on + strand at 988.451 kb on + strand at 988.451 kb on + strand at 988.451 kb on + strand at 988.451 kb on + strand at 988.452 kb on - strand at 988.452 kb on - strand at 988.452 kb on - strand at 988.452 kb on - strand at 988.452 kb on - strand at 988.454 kb on + strand at 988.454 kb on + strand at 988.455 kb on - strand at 988.497 kb on + strand at 988.497 kb on + strand at 988.497 kb on + strand at 988.498 kb on - strand at 988.547 kb on + strand at 988.548 kb on - strand at 988.589 kb on + strand, within Psest_0912 at 988.674 kb on - strand, within Psest_0912 at 988.735 kb on - strand, within Psest_0912 at 988.810 kb on + strand, within Psest_0912 at 988.810 kb on + strand, within Psest_0912 at 988.811 kb on - strand, within Psest_0912 at 988.811 kb on - strand, within Psest_0912 at 988.899 kb on + strand, within Psest_0912 at 988.899 kb on + strand, within Psest_0912 at 988.901 kb on + strand, within Psest_0912 at 988.901 kb on + strand, within Psest_0912 at 988.901 kb on + strand, within Psest_0912 at 988.901 kb on + strand, within Psest_0912 at 988.901 kb on + strand, within Psest_0912 at 988.901 kb on + strand, within Psest_0912 at 988.901 kb on + strand, within Psest_0912 at 988.901 kb on + strand, within Psest_0912 at 988.901 kb on + strand, within Psest_0912 at 988.901 kb on + strand, within Psest_0912 at 988.902 kb on - strand, within Psest_0912 at 988.902 kb on - strand, within Psest_0912 at 988.902 kb on - strand, within Psest_0912 at 988.902 kb on - strand, within Psest_0912 at 988.902 kb on - strand, within Psest_0912 at 988.902 kb on - strand, within Psest_0912 at 988.902 kb on - strand, within Psest_0912 at 988.902 kb on - strand, within Psest_0912 at 988.902 kb on - strand, within Psest_0912 at 988.902 kb on - strand, within Psest_0912 at 988.902 kb on - strand, within Psest_0912 at 988.902 kb on - strand, within Psest_0912 at 988.902 kb on - strand, within Psest_0912 at 988.921 kb on + strand, within Psest_0912 at 988.921 kb on + strand, within Psest_0912 at 988.933 kb on + strand, within Psest_0912 at 988.966 kb on + strand, within Psest_0912 at 988.967 kb on - strand, within Psest_0912 at 988.967 kb on - strand, within Psest_0912 at 988.992 kb on + strand, within Psest_0912 at 989.027 kb on + strand, within Psest_0912 at 989.027 kb on + strand, within Psest_0912 at 989.027 kb on + strand, within Psest_0912 at 989.027 kb on + strand, within Psest_0912 at 989.028 kb on - strand, within Psest_0912 at 989.028 kb on - strand, within Psest_0912 at 989.028 kb on - strand, within Psest_0912 at 989.035 kb on + strand, within Psest_0912
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.002 mg/ml remove 986,442 + Psest_0908 0.59 +0.8 986,442 + Psest_0908 0.59 +0.4 986,442 + Psest_0908 0.59 -0.2 986,443 - Psest_0908 0.60 -0.3 986,484 - Psest_0908 0.70 -0.9 986,484 - Psest_0908 0.70 -1.1 986,484 - Psest_0908 0.70 -0.0 986,534 + Psest_0908 0.82 -1.9 986,534 + Psest_0908 0.82 -0.0 986,534 + Psest_0908 0.82 -0.7 986,541 + Psest_0908 0.84 +0.7 986,542 - Psest_0908 0.84 +1.2 986,542 - Psest_0908 0.84 +0.4 986,542 - Psest_0908 0.84 -1.3 986,585 + +0.3 986,586 - -0.9 986,620 - -0.8 986,637 + +0.1 986,637 + -0.1 986,637 + -1.0 986,680 + Psest_0909 0.23 -0.5 986,681 - Psest_0909 0.24 -0.1 986,681 - Psest_0909 0.24 -1.8 986,814 - Psest_0909 0.66 +0.6 986,835 + Psest_0909 0.73 -1.2 986,835 + Psest_0909 0.73 +0.7 986,835 + Psest_0909 0.73 -0.9 986,835 + Psest_0909 0.73 -2.1 986,835 + Psest_0909 0.73 -0.7 986,836 - Psest_0909 0.73 -0.1 986,836 - Psest_0909 0.73 -0.0 986,836 - Psest_0909 0.73 -2.1 986,836 - Psest_0909 0.73 -3.0 986,836 - Psest_0909 0.73 -0.5 986,836 - Psest_0909 0.73 -1.2 986,836 - Psest_0909 0.73 +0.2 986,873 + Psest_0909 0.85 +0.8 986,873 + Psest_0909 0.85 +0.7 986,873 + Psest_0909 0.85 -0.7 986,874 - Psest_0909 0.85 -1.1 986,888 - Psest_0909 0.90 +0.5 986,904 - -1.6 987,012 + Psest_0910 0.11 -0.8 987,013 - Psest_0910 0.11 +1.1 987,013 - Psest_0910 0.11 -0.8 987,041 - Psest_0910 0.19 +0.6 987,083 + Psest_0910 0.30 -0.7 987,140 + Psest_0910 0.45 +0.1 987,140 + Psest_0910 0.45 +1.2 987,140 + Psest_0910 0.45 -0.9 987,141 - Psest_0910 0.45 +0.1 987,141 - Psest_0910 0.45 -1.7 987,183 + Psest_0910 0.57 -0.6 987,183 + Psest_0910 0.57 +0.6 987,184 - Psest_0910 0.57 -0.9 987,184 - Psest_0910 0.57 -3.0 987,242 + Psest_0910 0.73 +0.0 987,242 + Psest_0910 0.73 -0.3 987,242 + Psest_0910 0.73 -0.3 987,242 + Psest_0910 0.73 -0.6 987,242 + Psest_0910 0.73 -0.2 987,242 + Psest_0910 0.73 -0.6 987,242 + Psest_0910 0.73 +0.3 987,242 + Psest_0910 0.73 -0.3 987,243 - Psest_0910 0.73 -1.4 987,243 - Psest_0910 0.73 -1.5 987,243 - Psest_0910 0.73 -0.2 987,243 - Psest_0910 0.73 -2.5 987,243 - Psest_0910 0.73 +0.2 987,315 + +0.1 987,362 - -0.3 987,362 - -0.5 987,364 + +1.6 987,364 + +0.2 987,365 - -1.6 987,367 - +1.1 987,405 + -0.4 987,406 - -2.3 987,406 - +0.1 987,406 - -0.4 987,445 + -0.2 987,503 - +0.2 987,537 + Psest_0911 0.15 +0.1 987,577 + Psest_0911 0.21 -0.1 987,577 + Psest_0911 0.21 -0.5 987,577 + Psest_0911 0.21 -1.5 987,577 + Psest_0911 0.21 -1.0 987,578 - Psest_0911 0.21 -1.1 987,578 - Psest_0911 0.21 +0.2 987,703 + Psest_0911 0.41 -2.8 987,733 + Psest_0911 0.45 -0.3 987,733 + Psest_0911 0.45 -0.5 987,733 + Psest_0911 0.45 +0.7 987,734 - Psest_0911 0.45 -0.7 987,734 - Psest_0911 0.45 -0.6 987,775 + Psest_0911 0.52 -0.1 987,776 - Psest_0911 0.52 -1.0 987,776 - Psest_0911 0.52 -1.7 987,776 - Psest_0911 0.52 -0.1 987,776 - Psest_0911 0.52 -1.3 987,776 - Psest_0911 0.52 -3.1 987,812 + Psest_0911 0.57 +0.3 987,813 - Psest_0911 0.57 +0.9 987,847 - Psest_0911 0.63 +0.5 987,889 + Psest_0911 0.69 -2.2 987,889 + Psest_0911 0.69 -1.2 987,890 - Psest_0911 0.69 +0.1 987,895 + Psest_0911 0.70 -0.0 987,895 + Psest_0911 0.70 -0.2 987,895 + Psest_0911 0.70 +0.8 987,895 + Psest_0911 0.70 -1.1 987,895 + Psest_0911 0.70 -0.3 987,895 + Psest_0911 0.70 -1.6 987,896 - Psest_0911 0.70 -1.1 987,896 - Psest_0911 0.70 -1.3 987,896 - Psest_0911 0.70 -1.6 987,896 - Psest_0911 0.70 -2.5 987,896 - Psest_0911 0.70 -0.9 987,896 - Psest_0911 0.70 -0.3 987,896 - Psest_0911 0.70 -2.6 987,896 - Psest_0911 0.70 -0.7 987,896 - Psest_0911 0.70 -3.1 987,896 - Psest_0911 0.70 +0.0 987,896 - Psest_0911 0.70 -1.3 987,896 - Psest_0911 0.70 -0.6 987,896 - Psest_0911 0.70 -0.7 987,896 - Psest_0911 0.70 +0.1 987,896 - Psest_0911 0.70 -1.3 987,896 - Psest_0911 0.70 -0.6 987,917 + Psest_0911 0.73 -0.9 987,925 + Psest_0911 0.74 -1.0 987,925 + Psest_0911 0.74 -2.3 987,925 + Psest_0911 0.74 +0.1 987,926 - Psest_0911 0.75 -0.4 987,926 - Psest_0911 0.75 +0.0 987,926 - Psest_0911 0.75 -0.9 987,991 + Psest_0911 0.85 +0.6 987,991 + Psest_0911 0.85 +0.4 987,992 - Psest_0911 0.85 -2.3 987,992 - Psest_0911 0.85 -2.6 988,064 - -0.5 988,089 + -1.6 988,090 - -0.5 988,092 + -0.3 988,200 - -1.4 988,200 - +1.4 988,216 + +0.5 988,216 + -2.1 988,216 + -0.5 988,216 + +0.0 988,216 + -0.4 988,216 + -0.5 988,216 + -0.7 988,216 + +0.1 988,216 + -0.0 988,216 + -0.0 988,216 + -0.7 988,216 + -1.0 988,216 + -0.0 988,216 + -1.7 988,216 + +0.5 988,216 + +0.3 988,216 + -0.2 988,217 - -0.3 988,217 - -0.7 988,217 - +0.2 988,217 - -0.1 988,217 - -0.3 988,217 - +0.1 988,217 - -1.7 988,217 - -1.5 988,231 + -1.4 988,232 - +1.5 988,232 - +1.2 988,283 + -0.7 988,283 + -0.7 988,283 + -0.8 988,283 + -0.5 988,284 - -1.6 988,284 - -0.7 988,284 - -0.4 988,284 - -1.5 988,284 - +0.3 988,284 - -1.5 988,286 - -0.6 988,314 + -0.2 988,338 - -0.2 988,451 + -0.6 988,451 + -0.3 988,451 + -0.2 988,451 + -0.2 988,451 + +0.6 988,452 - -2.5 988,452 - +0.4 988,452 - -0.3 988,452 - -2.5 988,452 - -0.2 988,454 + -0.9 988,454 + -0.7 988,455 - -1.6 988,497 + +0.3 988,497 + +0.2 988,497 + -0.5 988,498 - +0.3 988,547 + -0.1 988,548 - -0.5 988,589 + Psest_0912 0.12 +0.4 988,674 - Psest_0912 0.15 +0.5 988,735 - Psest_0912 0.18 +0.2 988,810 + Psest_0912 0.21 -2.7 988,810 + Psest_0912 0.21 -0.2 988,811 - Psest_0912 0.21 -0.3 988,811 - Psest_0912 0.21 -3.2 988,899 + Psest_0912 0.24 -3.1 988,899 + Psest_0912 0.24 +0.9 988,901 + Psest_0912 0.24 +0.5 988,901 + Psest_0912 0.24 +1.8 988,901 + Psest_0912 0.24 -0.2 988,901 + Psest_0912 0.24 -1.9 988,901 + Psest_0912 0.24 +0.2 988,901 + Psest_0912 0.24 +0.7 988,901 + Psest_0912 0.24 +1.0 988,901 + Psest_0912 0.24 +0.0 988,901 + Psest_0912 0.24 -1.3 988,901 + Psest_0912 0.24 +0.9 988,902 - Psest_0912 0.24 -0.1 988,902 - Psest_0912 0.24 -0.7 988,902 - Psest_0912 0.24 +0.7 988,902 - Psest_0912 0.24 -0.9 988,902 - Psest_0912 0.24 -1.0 988,902 - Psest_0912 0.24 -0.1 988,902 - Psest_0912 0.24 +0.3 988,902 - Psest_0912 0.24 +0.3 988,902 - Psest_0912 0.24 -1.7 988,902 - Psest_0912 0.24 -0.2 988,902 - Psest_0912 0.24 -0.6 988,902 - Psest_0912 0.24 -1.5 988,902 - Psest_0912 0.24 -1.2 988,921 + Psest_0912 0.25 -0.5 988,921 + Psest_0912 0.25 -3.3 988,933 + Psest_0912 0.25 +0.8 988,966 + Psest_0912 0.27 -2.5 988,967 - Psest_0912 0.27 +0.4 988,967 - Psest_0912 0.27 -3.5 988,992 + Psest_0912 0.28 -3.0 989,027 + Psest_0912 0.29 +0.5 989,027 + Psest_0912 0.29 +1.4 989,027 + Psest_0912 0.29 -0.2 989,027 + Psest_0912 0.29 -1.3 989,028 - Psest_0912 0.29 -0.9 989,028 - Psest_0912 0.29 +1.2 989,028 - Psest_0912 0.29 -0.7 989,035 + Psest_0912 0.30 -2.2
Or see this region's nucleotide sequence