Experiment: Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0727 and Psest_0728 are separated by 12 nucleotides Psest_0728 and Psest_0729 are separated by 50 nucleotides Psest_0729 and Psest_0730 are separated by 52 nucleotides
Psest_0727: Psest_0727 - Methyl-accepting chemotaxis protein, at 796,363 to 798,393
_0727
Psest_0728: Psest_0728 - hydrolase, TatD family, at 798,406 to 799,191
_0728
Psest_0729: Psest_0729 - hypothetical protein, at 799,242 to 799,484
_0729
Psest_0730: Psest_0730 - O-6-methylguanine DNA methyltransferase, at 799,537 to 800,577
_0730
Position (kb)
798
799
800 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 797.463 kb on + strand, within Psest_0727 at 798.129 kb on + strand, within Psest_0727 at 798.129 kb on + strand, within Psest_0727 at 798.130 kb on - strand, within Psest_0727 at 798.447 kb on - strand at 798.545 kb on + strand, within Psest_0728 at 798.645 kb on + strand, within Psest_0728 at 798.686 kb on + strand, within Psest_0728 at 798.686 kb on + strand, within Psest_0728 at 798.687 kb on - strand, within Psest_0728 at 798.790 kb on + strand, within Psest_0728 at 798.790 kb on + strand, within Psest_0728 at 798.790 kb on + strand, within Psest_0728 at 798.790 kb on + strand, within Psest_0728 at 798.791 kb on - strand, within Psest_0728 at 798.791 kb on - strand, within Psest_0728 at 798.791 kb on - strand, within Psest_0728 at 798.884 kb on + strand, within Psest_0728 at 798.884 kb on + strand, within Psest_0728 at 798.884 kb on + strand, within Psest_0728 at 798.884 kb on + strand, within Psest_0728 at 798.884 kb on + strand, within Psest_0728 at 798.884 kb on + strand, within Psest_0728 at 798.884 kb on + strand, within Psest_0728 at 798.885 kb on - strand, within Psest_0728 at 798.885 kb on - strand, within Psest_0728 at 798.885 kb on - strand, within Psest_0728 at 798.887 kb on + strand, within Psest_0728 at 798.887 kb on + strand, within Psest_0728 at 798.888 kb on - strand, within Psest_0728 at 798.888 kb on - strand, within Psest_0728 at 799.019 kb on + strand, within Psest_0728 at 799.019 kb on + strand, within Psest_0728 at 799.019 kb on + strand, within Psest_0728 at 799.019 kb on + strand, within Psest_0728 at 799.019 kb on + strand, within Psest_0728 at 799.020 kb on - strand, within Psest_0728 at 799.020 kb on - strand, within Psest_0728 at 799.020 kb on - strand, within Psest_0728 at 799.020 kb on - strand, within Psest_0728 at 799.020 kb on - strand, within Psest_0728 at 799.020 kb on - strand, within Psest_0728 at 799.020 kb on - strand, within Psest_0728 at 799.023 kb on + strand, within Psest_0728 at 799.023 kb on + strand, within Psest_0728 at 799.023 kb on + strand, within Psest_0728 at 799.023 kb on + strand, within Psest_0728 at 799.024 kb on - strand, within Psest_0728 at 799.024 kb on - strand, within Psest_0728 at 799.024 kb on - strand, within Psest_0728 at 799.024 kb on - strand, within Psest_0728 at 799.075 kb on + strand, within Psest_0728 at 799.075 kb on + strand, within Psest_0728 at 799.075 kb on + strand, within Psest_0728 at 799.075 kb on + strand, within Psest_0728 at 799.075 kb on + strand, within Psest_0728 at 799.075 kb on + strand, within Psest_0728 at 799.076 kb on - strand, within Psest_0728 at 799.076 kb on - strand, within Psest_0728 at 799.076 kb on - strand, within Psest_0728 at 799.076 kb on - strand, within Psest_0728 at 799.076 kb on - strand, within Psest_0728 at 799.076 kb on - strand, within Psest_0728 at 799.076 kb on - strand, within Psest_0728 at 799.232 kb on + strand at 799.232 kb on + strand at 799.232 kb on + strand at 799.232 kb on + strand at 799.232 kb on + strand at 799.232 kb on + strand at 799.232 kb on + strand at 799.232 kb on + strand at 799.232 kb on + strand at 799.232 kb on + strand at 799.232 kb on + strand at 799.232 kb on + strand at 799.232 kb on + strand at 799.232 kb on + strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.514 kb on + strand at 799.514 kb on + strand at 799.514 kb on + strand at 799.514 kb on + strand at 799.514 kb on + strand at 799.514 kb on + strand at 799.514 kb on + strand at 799.514 kb on + strand at 799.515 kb on - strand at 799.515 kb on - strand at 799.515 kb on - strand at 799.515 kb on - strand at 799.971 kb on + strand, within Psest_0730 at 799.971 kb on + strand, within Psest_0730 at 799.971 kb on + strand, within Psest_0730 at 799.971 kb on + strand, within Psest_0730 at 799.971 kb on + strand, within Psest_0730 at 799.972 kb on - strand, within Psest_0730 at 799.972 kb on - strand, within Psest_0730
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.002 mg/ml remove 797,463 + Psest_0727 0.54 +0.3 798,129 + Psest_0727 0.87 +0.4 798,129 + Psest_0727 0.87 -0.1 798,130 - Psest_0727 0.87 +1.0 798,447 - -0.0 798,545 + Psest_0728 0.18 -1.0 798,645 + Psest_0728 0.30 -0.7 798,686 + Psest_0728 0.36 -0.0 798,686 + Psest_0728 0.36 +1.4 798,687 - Psest_0728 0.36 -0.6 798,790 + Psest_0728 0.49 +0.4 798,790 + Psest_0728 0.49 +1.0 798,790 + Psest_0728 0.49 -2.3 798,790 + Psest_0728 0.49 +1.0 798,791 - Psest_0728 0.49 -1.6 798,791 - Psest_0728 0.49 -0.6 798,791 - Psest_0728 0.49 +0.4 798,884 + Psest_0728 0.61 -0.6 798,884 + Psest_0728 0.61 +1.4 798,884 + Psest_0728 0.61 -0.6 798,884 + Psest_0728 0.61 -0.3 798,884 + Psest_0728 0.61 -0.2 798,884 + Psest_0728 0.61 +1.2 798,884 + Psest_0728 0.61 -0.0 798,885 - Psest_0728 0.61 -1.7 798,885 - Psest_0728 0.61 -0.2 798,885 - Psest_0728 0.61 -0.2 798,887 + Psest_0728 0.61 -0.8 798,887 + Psest_0728 0.61 -1.3 798,888 - Psest_0728 0.61 -0.3 798,888 - Psest_0728 0.61 -0.6 799,019 + Psest_0728 0.78 -1.0 799,019 + Psest_0728 0.78 -0.3 799,019 + Psest_0728 0.78 -1.3 799,019 + Psest_0728 0.78 -1.0 799,019 + Psest_0728 0.78 -0.0 799,020 - Psest_0728 0.78 -1.7 799,020 - Psest_0728 0.78 -0.0 799,020 - Psest_0728 0.78 -0.4 799,020 - Psest_0728 0.78 -0.8 799,020 - Psest_0728 0.78 -0.1 799,020 - Psest_0728 0.78 -0.8 799,020 - Psest_0728 0.78 -1.1 799,023 + Psest_0728 0.78 -1.0 799,023 + Psest_0728 0.78 -1.3 799,023 + Psest_0728 0.78 -1.0 799,023 + Psest_0728 0.78 -0.9 799,024 - Psest_0728 0.79 -1.8 799,024 - Psest_0728 0.79 -1.8 799,024 - Psest_0728 0.79 -2.3 799,024 - Psest_0728 0.79 -0.9 799,075 + Psest_0728 0.85 -0.2 799,075 + Psest_0728 0.85 -0.6 799,075 + Psest_0728 0.85 -1.3 799,075 + Psest_0728 0.85 +0.2 799,075 + Psest_0728 0.85 +3.0 799,075 + Psest_0728 0.85 -0.3 799,076 - Psest_0728 0.85 -1.5 799,076 - Psest_0728 0.85 -0.7 799,076 - Psest_0728 0.85 -0.7 799,076 - Psest_0728 0.85 -2.3 799,076 - Psest_0728 0.85 +1.3 799,076 - Psest_0728 0.85 +0.2 799,076 - Psest_0728 0.85 -1.8 799,232 + -0.3 799,232 + +1.6 799,232 + +0.2 799,232 + -1.5 799,232 + +0.5 799,232 + +1.0 799,232 + -0.0 799,232 + -0.3 799,232 + +0.7 799,232 + -1.0 799,232 + +0.5 799,232 + -1.3 799,232 + +1.0 799,232 + +1.0 799,233 - -0.3 799,233 - -1.0 799,233 - +1.0 799,233 - +1.2 799,233 - -1.3 799,233 - +0.5 799,233 - -0.5 799,233 - -1.7 799,233 - -0.5 799,233 - +0.7 799,233 - +1.2 799,233 - +0.1 799,233 - -0.5 799,233 - -0.3 799,233 - -1.3 799,233 - +0.4 799,233 - -0.9 799,233 - -0.3 799,233 - -1.3 799,233 - -0.6 799,233 - +1.0 799,233 - +0.4 799,233 - -0.2 799,233 - -1.0 799,514 + +0.4 799,514 + +1.2 799,514 + +0.8 799,514 + -0.8 799,514 + +1.0 799,514 + +1.0 799,514 + +1.0 799,514 + -0.6 799,515 - -0.0 799,515 - -1.0 799,515 - -1.2 799,515 - -1.2 799,971 + Psest_0730 0.42 +2.0 799,971 + Psest_0730 0.42 -1.0 799,971 + Psest_0730 0.42 -0.2 799,971 + Psest_0730 0.42 -0.0 799,971 + Psest_0730 0.42 -0.0 799,972 - Psest_0730 0.42 -1.0 799,972 - Psest_0730 0.42 +2.0
Or see this region's nucleotide sequence