Experiment: Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0706 and Psest_0707 overlap by 11 nucleotides Psest_0707 and Psest_0708 are separated by 112 nucleotides
Psest_0706: Psest_0706 - His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase., at 775,355 to 776,947
_0706
Psest_0707: Psest_0707 - MYND finger., at 776,937 to 777,170
_0707
Psest_0708: Psest_0708 - outer membrane assembly lipoprotein YfiO, at 777,283 to 778,272
_0708
Position (kb) 776
777
778 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 776.490 kb on + strand, within Psest_0706 at 776.491 kb on - strand, within Psest_0706 at 776.526 kb on + strand, within Psest_0706 at 776.526 kb on + strand, within Psest_0706 at 776.526 kb on + strand, within Psest_0706 at 776.526 kb on + strand, within Psest_0706 at 776.526 kb on + strand, within Psest_0706 at 776.526 kb on + strand, within Psest_0706 at 776.527 kb on - strand, within Psest_0706 at 776.538 kb on + strand, within Psest_0706 at 776.538 kb on + strand, within Psest_0706 at 776.538 kb on + strand, within Psest_0706 at 776.538 kb on + strand, within Psest_0706 at 776.538 kb on + strand, within Psest_0706 at 776.538 kb on + strand, within Psest_0706 at 776.539 kb on - strand, within Psest_0706 at 776.539 kb on - strand, within Psest_0706 at 776.539 kb on - strand, within Psest_0706 at 776.539 kb on - strand, within Psest_0706 at 776.539 kb on - strand, within Psest_0706 at 776.664 kb on + strand, within Psest_0706 at 776.664 kb on + strand, within Psest_0706 at 776.664 kb on + strand, within Psest_0706 at 776.664 kb on + strand, within Psest_0706 at 776.664 kb on + strand, within Psest_0706 at 776.772 kb on + strand, within Psest_0706 at 776.772 kb on + strand, within Psest_0706 at 776.889 kb on + strand at 776.890 kb on - strand at 776.986 kb on + strand, within Psest_0707 at 777.024 kb on + strand, within Psest_0707 at 777.024 kb on + strand, within Psest_0707 at 777.024 kb on + strand, within Psest_0707 at 777.025 kb on - strand, within Psest_0707 at 777.025 kb on - strand, within Psest_0707 at 777.025 kb on - strand, within Psest_0707 at 777.025 kb on - strand, within Psest_0707 at 777.025 kb on - strand, within Psest_0707 at 777.025 kb on - strand, within Psest_0707 at 777.025 kb on - strand, within Psest_0707 at 777.025 kb on - strand, within Psest_0707 at 777.025 kb on - strand, within Psest_0707 at 777.025 kb on - strand, within Psest_0707 at 777.030 kb on + strand, within Psest_0707 at 777.252 kb on + strand at 777.252 kb on + strand at 777.252 kb on + strand at 777.252 kb on + strand at 777.252 kb on + strand at 777.253 kb on - strand at 777.253 kb on - strand at 777.253 kb on - strand at 777.253 kb on - strand at 777.253 kb on - strand at 777.253 kb on - strand at 777.253 kb on - strand at 777.253 kb on - strand at 777.253 kb on - strand at 777.253 kb on - strand at 777.253 kb on - strand at 777.253 kb on - strand at 777.343 kb on + strand at 777.409 kb on + strand, within Psest_0708 at 777.555 kb on - strand, within Psest_0708 at 777.555 kb on - strand, within Psest_0708
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.002 mg/ml remove 776,490 + Psest_0706 0.71 -1.5 776,491 - Psest_0706 0.71 -1.0 776,526 + Psest_0706 0.74 +0.3 776,526 + Psest_0706 0.74 -0.6 776,526 + Psest_0706 0.74 -0.1 776,526 + Psest_0706 0.74 -1.4 776,526 + Psest_0706 0.74 -0.7 776,526 + Psest_0706 0.74 -0.5 776,527 - Psest_0706 0.74 -0.1 776,538 + Psest_0706 0.74 +0.5 776,538 + Psest_0706 0.74 -0.3 776,538 + Psest_0706 0.74 -1.9 776,538 + Psest_0706 0.74 -0.1 776,538 + Psest_0706 0.74 -0.3 776,538 + Psest_0706 0.74 +0.1 776,539 - Psest_0706 0.74 +0.6 776,539 - Psest_0706 0.74 -0.7 776,539 - Psest_0706 0.74 +0.2 776,539 - Psest_0706 0.74 +1.0 776,539 - Psest_0706 0.74 +0.4 776,664 + Psest_0706 0.82 -1.1 776,664 + Psest_0706 0.82 -0.7 776,664 + Psest_0706 0.82 -0.1 776,664 + Psest_0706 0.82 -2.5 776,664 + Psest_0706 0.82 -1.7 776,772 + Psest_0706 0.89 +0.3 776,772 + Psest_0706 0.89 -0.4 776,889 + -3.1 776,890 - -0.1 776,986 + Psest_0707 0.21 -0.8 777,024 + Psest_0707 0.37 -0.4 777,024 + Psest_0707 0.37 -1.2 777,024 + Psest_0707 0.37 -0.4 777,025 - Psest_0707 0.38 -1.1 777,025 - Psest_0707 0.38 -0.3 777,025 - Psest_0707 0.38 -2.1 777,025 - Psest_0707 0.38 -3.3 777,025 - Psest_0707 0.38 -3.8 777,025 - Psest_0707 0.38 -1.6 777,025 - Psest_0707 0.38 -1.1 777,025 - Psest_0707 0.38 -1.3 777,025 - Psest_0707 0.38 -1.0 777,025 - Psest_0707 0.38 -1.1 777,030 + Psest_0707 0.40 -0.6 777,252 + -0.2 777,252 + -1.5 777,252 + +1.6 777,252 + -1.3 777,252 + -0.3 777,253 - +0.6 777,253 - -0.4 777,253 - -0.8 777,253 - +0.2 777,253 - -0.5 777,253 - -0.3 777,253 - -2.3 777,253 - +0.6 777,253 - +0.5 777,253 - -0.6 777,253 - -1.2 777,253 - -0.9 777,343 + -2.9 777,409 + Psest_0708 0.13 -3.6 777,555 - Psest_0708 0.27 +0.2 777,555 - Psest_0708 0.27 -2.3
Or see this region's nucleotide sequence