Experiment: Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0453 and Psest_0454 are separated by 43 nucleotides Psest_0454 and Psest_0455 are separated by 8 nucleotides Psest_0455 and Psest_0456 overlap by 1 nucleotides
Psest_0453: Psest_0453 - Glycosyltransferase, at 499,210 to 500,331
_0453
Psest_0454: Psest_0454 - Lipopolysaccharide kinase (Kdo/WaaP) family., at 500,375 to 501,181
_0454
Psest_0455: Psest_0455 - ADP-heptose:LPS heptosyltransferase, at 501,190 to 502,146
_0455
Psest_0456: Psest_0456 - Lipopolysaccharide kinase (Kdo/WaaP) family., at 502,146 to 502,880
_0456
Position (kb) 500
501
502 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 500.374 kb on + strand at 501.236 kb on + strand at 501.236 kb on + strand at 501.236 kb on + strand at 501.236 kb on + strand at 501.251 kb on + strand at 501.251 kb on + strand at 501.251 kb on + strand at 501.251 kb on + strand at 501.251 kb on + strand at 501.251 kb on + strand at 501.251 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.272 kb on + strand at 501.272 kb on + strand at 501.309 kb on + strand, within Psest_0455 at 501.309 kb on + strand, within Psest_0455 at 501.318 kb on + strand, within Psest_0455 at 501.318 kb on + strand, within Psest_0455 at 501.334 kb on + strand, within Psest_0455 at 501.334 kb on + strand, within Psest_0455 at 501.334 kb on + strand, within Psest_0455 at 501.334 kb on + strand, within Psest_0455 at 501.415 kb on + strand, within Psest_0455 at 501.415 kb on + strand, within Psest_0455 at 501.415 kb on + strand, within Psest_0455 at 501.415 kb on + strand, within Psest_0455 at 501.415 kb on + strand, within Psest_0455 at 501.513 kb on + strand, within Psest_0455 at 501.513 kb on + strand, within Psest_0455 at 501.513 kb on + strand, within Psest_0455 at 501.513 kb on + strand, within Psest_0455 at 501.617 kb on + strand, within Psest_0455 at 501.617 kb on + strand, within Psest_0455 at 501.617 kb on + strand, within Psest_0455 at 501.677 kb on + strand, within Psest_0455 at 501.710 kb on + strand, within Psest_0455 at 501.748 kb on + strand, within Psest_0455 at 501.748 kb on + strand, within Psest_0455 at 501.748 kb on + strand, within Psest_0455 at 501.748 kb on + strand, within Psest_0455 at 501.996 kb on + strand, within Psest_0455 at 502.084 kb on + strand at 502.084 kb on + strand at 502.084 kb on + strand at 502.084 kb on + strand at 502.084 kb on + strand at 502.088 kb on + strand at 502.137 kb on + strand at 502.173 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.002 mg/ml remove 500,374 + -1.0 501,236 + +1.4 501,236 + -1.1 501,236 + -0.6 501,236 + -0.2 501,251 + -2.0 501,251 + -0.7 501,251 + -0.8 501,251 + -1.4 501,251 + -0.8 501,251 + -0.1 501,251 + -1.7 501,253 + -0.7 501,253 + -0.2 501,253 + -2.0 501,253 + -0.8 501,253 + -2.2 501,253 + +0.3 501,253 + -1.0 501,253 + -2.0 501,253 + -1.5 501,253 + -1.0 501,253 + -0.2 501,253 + -0.5 501,253 + +0.8 501,272 + -1.7 501,272 + -2.3 501,309 + Psest_0455 0.12 -0.7 501,309 + Psest_0455 0.12 -1.0 501,318 + Psest_0455 0.13 +0.1 501,318 + Psest_0455 0.13 -3.1 501,334 + Psest_0455 0.15 -0.5 501,334 + Psest_0455 0.15 -0.7 501,334 + Psest_0455 0.15 -0.8 501,334 + Psest_0455 0.15 -1.2 501,415 + Psest_0455 0.24 -0.7 501,415 + Psest_0455 0.24 -0.6 501,415 + Psest_0455 0.24 -0.1 501,415 + Psest_0455 0.24 -1.8 501,415 + Psest_0455 0.24 -1.8 501,513 + Psest_0455 0.34 -1.0 501,513 + Psest_0455 0.34 +1.4 501,513 + Psest_0455 0.34 -0.7 501,513 + Psest_0455 0.34 -1.0 501,617 + Psest_0455 0.45 -1.7 501,617 + Psest_0455 0.45 -2.3 501,617 + Psest_0455 0.45 -0.9 501,677 + Psest_0455 0.51 -2.0 501,710 + Psest_0455 0.54 -1.3 501,748 + Psest_0455 0.58 +0.6 501,748 + Psest_0455 0.58 -0.8 501,748 + Psest_0455 0.58 -2.2 501,748 + Psest_0455 0.58 -1.9 501,996 + Psest_0455 0.84 -1.1 502,084 + +0.1 502,084 + -1.0 502,084 + +0.2 502,084 + -3.6 502,084 + -0.3 502,088 + -0.4 502,137 + -0.5 502,173 + -1.8
Or see this region's nucleotide sequence