Experiment: Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3707 and Psest_3708 are separated by 193 nucleotides Psest_3708 and Psest_3709 are separated by 57 nucleotides
Psest_3707: Psest_3707 - Transcriptional regulator, at 3,869,872 to 3,870,771
_3707
Psest_3708: Psest_3708 - Arabinose efflux permease, at 3,870,965 to 3,872,230
_3708
Psest_3709: Psest_3709 - uroporphyrinogen decarboxylase, at 3,872,288 to 3,873,352
_3709
Position (kb)
3870
3871
3872
3873 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3870.155 kb on + strand, within Psest_3707 at 3870.170 kb on + strand, within Psest_3707 at 3870.170 kb on + strand, within Psest_3707 at 3870.643 kb on + strand, within Psest_3707 at 3870.644 kb on - strand, within Psest_3707 at 3870.644 kb on - strand, within Psest_3707 at 3870.644 kb on - strand, within Psest_3707 at 3870.644 kb on - strand, within Psest_3707 at 3870.749 kb on + strand at 3870.750 kb on - strand at 3870.783 kb on - strand at 3870.817 kb on + strand at 3870.818 kb on - strand at 3870.914 kb on + strand at 3871.112 kb on + strand, within Psest_3708 at 3871.263 kb on + strand, within Psest_3708 at 3871.397 kb on + strand, within Psest_3708 at 3871.397 kb on + strand, within Psest_3708 at 3871.397 kb on + strand, within Psest_3708 at 3871.398 kb on - strand, within Psest_3708 at 3871.398 kb on - strand, within Psest_3708 at 3871.398 kb on - strand, within Psest_3708 at 3871.398 kb on - strand, within Psest_3708 at 3871.448 kb on + strand, within Psest_3708 at 3871.448 kb on + strand, within Psest_3708 at 3871.448 kb on + strand, within Psest_3708 at 3871.448 kb on + strand, within Psest_3708 at 3871.448 kb on + strand, within Psest_3708 at 3871.448 kb on + strand, within Psest_3708 at 3871.448 kb on + strand, within Psest_3708 at 3871.449 kb on - strand, within Psest_3708 at 3871.449 kb on - strand, within Psest_3708 at 3871.449 kb on - strand, within Psest_3708 at 3871.449 kb on - strand, within Psest_3708 at 3871.449 kb on - strand, within Psest_3708 at 3871.449 kb on - strand, within Psest_3708 at 3871.449 kb on - strand, within Psest_3708 at 3871.511 kb on + strand, within Psest_3708 at 3871.511 kb on + strand, within Psest_3708 at 3871.511 kb on + strand, within Psest_3708 at 3871.511 kb on + strand, within Psest_3708 at 3871.511 kb on + strand, within Psest_3708 at 3871.511 kb on + strand, within Psest_3708 at 3871.511 kb on + strand, within Psest_3708 at 3871.511 kb on + strand, within Psest_3708 at 3871.512 kb on - strand, within Psest_3708 at 3871.512 kb on - strand, within Psest_3708 at 3871.728 kb on - strand, within Psest_3708 at 3871.733 kb on + strand, within Psest_3708 at 3871.733 kb on + strand, within Psest_3708 at 3871.733 kb on + strand, within Psest_3708 at 3871.733 kb on + strand, within Psest_3708 at 3871.733 kb on + strand, within Psest_3708 at 3871.733 kb on + strand, within Psest_3708 at 3871.733 kb on + strand, within Psest_3708 at 3871.733 kb on + strand, within Psest_3708 at 3871.733 kb on + strand, within Psest_3708 at 3871.733 kb on + strand, within Psest_3708 at 3871.734 kb on - strand, within Psest_3708 at 3871.734 kb on - strand, within Psest_3708 at 3871.734 kb on - strand, within Psest_3708 at 3871.734 kb on - strand, within Psest_3708 at 3871.734 kb on - strand, within Psest_3708 at 3871.734 kb on - strand, within Psest_3708 at 3871.734 kb on - strand, within Psest_3708 at 3871.734 kb on - strand, within Psest_3708 at 3871.734 kb on - strand, within Psest_3708 at 3871.806 kb on - strand, within Psest_3708 at 3871.806 kb on - strand, within Psest_3708 at 3871.806 kb on - strand, within Psest_3708 at 3871.806 kb on - strand, within Psest_3708 at 3871.820 kb on + strand, within Psest_3708 at 3871.820 kb on + strand, within Psest_3708 at 3871.820 kb on + strand, within Psest_3708 at 3871.820 kb on + strand, within Psest_3708 at 3871.820 kb on + strand, within Psest_3708 at 3871.820 kb on + strand, within Psest_3708 at 3871.820 kb on + strand, within Psest_3708 at 3871.820 kb on + strand, within Psest_3708 at 3871.821 kb on - strand, within Psest_3708 at 3871.908 kb on + strand, within Psest_3708 at 3872.051 kb on + strand, within Psest_3708 at 3872.052 kb on - strand, within Psest_3708 at 3872.052 kb on - strand, within Psest_3708 at 3872.063 kb on + strand, within Psest_3708 at 3872.063 kb on + strand, within Psest_3708 at 3872.063 kb on + strand, within Psest_3708 at 3872.066 kb on + strand, within Psest_3708 at 3872.066 kb on + strand, within Psest_3708 at 3872.066 kb on + strand, within Psest_3708 at 3872.066 kb on + strand, within Psest_3708 at 3872.066 kb on + strand, within Psest_3708 at 3872.066 kb on + strand, within Psest_3708 at 3872.067 kb on - strand, within Psest_3708 at 3872.067 kb on - strand, within Psest_3708 at 3872.067 kb on - strand, within Psest_3708 at 3872.157 kb on + strand at 3872.157 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.002 mg/ml remove 3,870,155 + Psest_3707 0.31 -0.1 3,870,170 + Psest_3707 0.33 +3.3 3,870,170 + Psest_3707 0.33 +0.8 3,870,643 + Psest_3707 0.86 -2.2 3,870,644 - Psest_3707 0.86 +0.5 3,870,644 - Psest_3707 0.86 -0.3 3,870,644 - Psest_3707 0.86 +0.1 3,870,644 - Psest_3707 0.86 +0.1 3,870,749 + -0.2 3,870,750 - +0.6 3,870,783 - +0.4 3,870,817 + -1.7 3,870,818 - +0.3 3,870,914 + +0.5 3,871,112 + Psest_3708 0.12 +0.0 3,871,263 + Psest_3708 0.24 +0.2 3,871,397 + Psest_3708 0.34 +0.5 3,871,397 + Psest_3708 0.34 -1.0 3,871,397 + Psest_3708 0.34 -0.1 3,871,398 - Psest_3708 0.34 -0.2 3,871,398 - Psest_3708 0.34 -0.5 3,871,398 - Psest_3708 0.34 +0.7 3,871,398 - Psest_3708 0.34 -0.8 3,871,448 + Psest_3708 0.38 +0.5 3,871,448 + Psest_3708 0.38 +0.3 3,871,448 + Psest_3708 0.38 +0.9 3,871,448 + Psest_3708 0.38 +0.8 3,871,448 + Psest_3708 0.38 +0.6 3,871,448 + Psest_3708 0.38 +0.5 3,871,448 + Psest_3708 0.38 +0.6 3,871,449 - Psest_3708 0.38 -0.4 3,871,449 - Psest_3708 0.38 +0.0 3,871,449 - Psest_3708 0.38 -0.8 3,871,449 - Psest_3708 0.38 +0.1 3,871,449 - Psest_3708 0.38 +0.4 3,871,449 - Psest_3708 0.38 -1.3 3,871,449 - Psest_3708 0.38 +0.2 3,871,511 + Psest_3708 0.43 +0.7 3,871,511 + Psest_3708 0.43 +0.8 3,871,511 + Psest_3708 0.43 +2.0 3,871,511 + Psest_3708 0.43 +1.0 3,871,511 + Psest_3708 0.43 +0.2 3,871,511 + Psest_3708 0.43 -2.2 3,871,511 + Psest_3708 0.43 -1.0 3,871,511 + Psest_3708 0.43 +1.2 3,871,512 - Psest_3708 0.43 +0.7 3,871,512 - Psest_3708 0.43 -0.8 3,871,728 - Psest_3708 0.60 +0.1 3,871,733 + Psest_3708 0.61 -0.5 3,871,733 + Psest_3708 0.61 +0.5 3,871,733 + Psest_3708 0.61 -1.2 3,871,733 + Psest_3708 0.61 -0.1 3,871,733 + Psest_3708 0.61 +0.0 3,871,733 + Psest_3708 0.61 +0.6 3,871,733 + Psest_3708 0.61 +1.0 3,871,733 + Psest_3708 0.61 +1.4 3,871,733 + Psest_3708 0.61 +0.9 3,871,733 + Psest_3708 0.61 +0.8 3,871,734 - Psest_3708 0.61 -0.7 3,871,734 - Psest_3708 0.61 +0.5 3,871,734 - Psest_3708 0.61 +0.2 3,871,734 - Psest_3708 0.61 +0.5 3,871,734 - Psest_3708 0.61 +0.1 3,871,734 - Psest_3708 0.61 -0.6 3,871,734 - Psest_3708 0.61 +0.6 3,871,734 - Psest_3708 0.61 -2.8 3,871,734 - Psest_3708 0.61 -0.5 3,871,806 - Psest_3708 0.66 +0.5 3,871,806 - Psest_3708 0.66 -2.9 3,871,806 - Psest_3708 0.66 +0.2 3,871,806 - Psest_3708 0.66 +0.2 3,871,820 + Psest_3708 0.68 +1.2 3,871,820 + Psest_3708 0.68 +0.9 3,871,820 + Psest_3708 0.68 +0.5 3,871,820 + Psest_3708 0.68 +0.8 3,871,820 + Psest_3708 0.68 +0.0 3,871,820 + Psest_3708 0.68 +0.3 3,871,820 + Psest_3708 0.68 +0.9 3,871,820 + Psest_3708 0.68 +0.9 3,871,821 - Psest_3708 0.68 -0.3 3,871,908 + Psest_3708 0.74 +0.1 3,872,051 + Psest_3708 0.86 +0.3 3,872,052 - Psest_3708 0.86 -1.6 3,872,052 - Psest_3708 0.86 +0.2 3,872,063 + Psest_3708 0.87 +0.7 3,872,063 + Psest_3708 0.87 +1.3 3,872,063 + Psest_3708 0.87 -0.1 3,872,066 + Psest_3708 0.87 +0.1 3,872,066 + Psest_3708 0.87 +0.4 3,872,066 + Psest_3708 0.87 +1.0 3,872,066 + Psest_3708 0.87 -0.5 3,872,066 + Psest_3708 0.87 +0.8 3,872,066 + Psest_3708 0.87 +0.7 3,872,067 - Psest_3708 0.87 -0.1 3,872,067 - Psest_3708 0.87 -1.2 3,872,067 - Psest_3708 0.87 -1.3 3,872,157 + +0.9 3,872,157 + +1.2
Or see this region's nucleotide sequence