Experiment: Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3196 and Psest_3197 are separated by 286 nucleotides Psest_3197 and Psest_3198 are separated by 189 nucleotides Psest_3198 and Psest_3199 are separated by 0 nucleotides
Psest_3196: Psest_3196 - Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes, at 3,367,824 to 3,368,981
_3196
Psest_3197: Psest_3197 - hypothetical protein, at 3,369,268 to 3,370,164
_3197
Psest_3198: Psest_3198 - Putative hemolysin, at 3,370,354 to 3,371,100
_3198
Psest_3199: Psest_3199 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 3,371,101 to 3,371,874
_3199
Position (kb)
3369
3370
3371 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3368.281 kb on + strand, within Psest_3196 at 3368.281 kb on + strand, within Psest_3196 at 3368.282 kb on - strand, within Psest_3196 at 3368.413 kb on - strand, within Psest_3196 at 3368.602 kb on + strand, within Psest_3196 at 3368.602 kb on + strand, within Psest_3196 at 3368.603 kb on - strand, within Psest_3196 at 3368.619 kb on + strand, within Psest_3196 at 3368.619 kb on + strand, within Psest_3196 at 3368.620 kb on - strand, within Psest_3196 at 3368.620 kb on - strand, within Psest_3196 at 3368.620 kb on - strand, within Psest_3196 at 3368.620 kb on - strand, within Psest_3196 at 3368.620 kb on - strand, within Psest_3196 at 3368.620 kb on - strand, within Psest_3196 at 3368.686 kb on + strand, within Psest_3196 at 3368.686 kb on + strand, within Psest_3196 at 3368.687 kb on - strand, within Psest_3196 at 3368.852 kb on - strand, within Psest_3196 at 3368.852 kb on - strand, within Psest_3196 at 3368.852 kb on - strand, within Psest_3196 at 3368.852 kb on - strand, within Psest_3196 at 3368.852 kb on - strand, within Psest_3196 at 3368.992 kb on + strand at 3368.993 kb on - strand at 3369.137 kb on + strand at 3369.218 kb on + strand at 3369.218 kb on + strand at 3369.219 kb on - strand at 3369.219 kb on - strand at 3369.219 kb on - strand at 3369.219 kb on - strand at 3369.220 kb on + strand at 3369.220 kb on + strand at 3369.220 kb on + strand at 3369.220 kb on + strand at 3369.220 kb on + strand at 3369.220 kb on + strand at 3369.220 kb on + strand at 3369.221 kb on - strand at 3369.523 kb on + strand, within Psest_3197 at 3369.524 kb on - strand, within Psest_3197 at 3369.595 kb on + strand, within Psest_3197 at 3369.614 kb on + strand, within Psest_3197 at 3369.615 kb on - strand, within Psest_3197 at 3369.615 kb on - strand, within Psest_3197 at 3369.615 kb on - strand, within Psest_3197 at 3369.635 kb on + strand, within Psest_3197 at 3369.936 kb on + strand, within Psest_3197 at 3369.995 kb on + strand, within Psest_3197 at 3370.044 kb on - strand, within Psest_3197 at 3370.088 kb on - strand at 3370.088 kb on - strand at 3370.088 kb on - strand at 3370.544 kb on + strand, within Psest_3198 at 3370.544 kb on + strand, within Psest_3198 at 3370.544 kb on + strand, within Psest_3198 at 3370.544 kb on + strand, within Psest_3198 at 3370.544 kb on + strand, within Psest_3198 at 3370.545 kb on - strand, within Psest_3198 at 3370.545 kb on - strand, within Psest_3198 at 3370.545 kb on - strand, within Psest_3198 at 3370.625 kb on - strand, within Psest_3198 at 3370.625 kb on - strand, within Psest_3198 at 3370.873 kb on - strand, within Psest_3198 at 3370.966 kb on + strand, within Psest_3198 at 3370.966 kb on + strand, within Psest_3198 at 3370.966 kb on + strand, within Psest_3198 at 3370.966 kb on + strand, within Psest_3198 at 3370.966 kb on + strand, within Psest_3198 at 3370.966 kb on + strand, within Psest_3198 at 3370.966 kb on + strand, within Psest_3198 at 3370.967 kb on - strand, within Psest_3198 at 3370.967 kb on - strand, within Psest_3198 at 3370.967 kb on - strand, within Psest_3198 at 3370.967 kb on - strand, within Psest_3198 at 3370.967 kb on - strand, within Psest_3198 at 3370.967 kb on - strand, within Psest_3198 at 3370.967 kb on - strand, within Psest_3198 at 3370.967 kb on - strand, within Psest_3198 at 3370.967 kb on - strand, within Psest_3198 at 3370.969 kb on - strand, within Psest_3198 at 3371.098 kb on + strand at 3371.098 kb on + strand at 3371.098 kb on + strand at 3371.098 kb on + strand at 3371.098 kb on + strand at 3371.098 kb on + strand at 3371.098 kb on + strand at 3371.162 kb on + strand at 3371.162 kb on + strand at 3371.163 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.002 mg/ml remove 3,368,281 + Psest_3196 0.39 -0.7 3,368,281 + Psest_3196 0.39 -1.4 3,368,282 - Psest_3196 0.40 -0.6 3,368,413 - Psest_3196 0.51 +0.6 3,368,602 + Psest_3196 0.67 -0.2 3,368,602 + Psest_3196 0.67 -1.6 3,368,603 - Psest_3196 0.67 +0.0 3,368,619 + Psest_3196 0.69 +0.1 3,368,619 + Psest_3196 0.69 -1.8 3,368,620 - Psest_3196 0.69 -0.7 3,368,620 - Psest_3196 0.69 -0.7 3,368,620 - Psest_3196 0.69 -0.6 3,368,620 - Psest_3196 0.69 -0.4 3,368,620 - Psest_3196 0.69 +0.7 3,368,620 - Psest_3196 0.69 +0.7 3,368,686 + Psest_3196 0.74 -1.4 3,368,686 + Psest_3196 0.74 -0.1 3,368,687 - Psest_3196 0.75 -1.9 3,368,852 - Psest_3196 0.89 +0.4 3,368,852 - Psest_3196 0.89 -0.0 3,368,852 - Psest_3196 0.89 -0.3 3,368,852 - Psest_3196 0.89 +0.8 3,368,852 - Psest_3196 0.89 -0.2 3,368,992 + -0.5 3,368,993 - +0.4 3,369,137 + +0.5 3,369,218 + -0.1 3,369,218 + -2.0 3,369,219 - -0.7 3,369,219 - +0.3 3,369,219 - -0.5 3,369,219 - -2.0 3,369,220 + -0.9 3,369,220 + +0.2 3,369,220 + -0.0 3,369,220 + -1.1 3,369,220 + -1.0 3,369,220 + -0.7 3,369,220 + -2.4 3,369,221 - -0.3 3,369,523 + Psest_3197 0.28 -1.1 3,369,524 - Psest_3197 0.29 -3.9 3,369,595 + Psest_3197 0.36 -1.0 3,369,614 + Psest_3197 0.39 +0.5 3,369,615 - Psest_3197 0.39 -0.5 3,369,615 - Psest_3197 0.39 -0.2 3,369,615 - Psest_3197 0.39 -0.8 3,369,635 + Psest_3197 0.41 -1.5 3,369,936 + Psest_3197 0.74 -0.6 3,369,995 + Psest_3197 0.81 -0.1 3,370,044 - Psest_3197 0.87 -0.4 3,370,088 - -1.7 3,370,088 - +0.6 3,370,088 - +0.1 3,370,544 + Psest_3198 0.25 -0.8 3,370,544 + Psest_3198 0.25 -1.7 3,370,544 + Psest_3198 0.25 -0.4 3,370,544 + Psest_3198 0.25 -0.1 3,370,544 + Psest_3198 0.25 -2.6 3,370,545 - Psest_3198 0.26 -1.1 3,370,545 - Psest_3198 0.26 +0.2 3,370,545 - Psest_3198 0.26 -0.4 3,370,625 - Psest_3198 0.36 -0.5 3,370,625 - Psest_3198 0.36 +0.2 3,370,873 - Psest_3198 0.69 +0.7 3,370,966 + Psest_3198 0.82 -0.5 3,370,966 + Psest_3198 0.82 +0.3 3,370,966 + Psest_3198 0.82 +0.0 3,370,966 + Psest_3198 0.82 -0.3 3,370,966 + Psest_3198 0.82 +0.4 3,370,966 + Psest_3198 0.82 +1.7 3,370,966 + Psest_3198 0.82 -0.2 3,370,967 - Psest_3198 0.82 -2.5 3,370,967 - Psest_3198 0.82 -2.2 3,370,967 - Psest_3198 0.82 -1.0 3,370,967 - Psest_3198 0.82 -0.7 3,370,967 - Psest_3198 0.82 +0.3 3,370,967 - Psest_3198 0.82 +0.3 3,370,967 - Psest_3198 0.82 -1.0 3,370,967 - Psest_3198 0.82 -0.6 3,370,967 - Psest_3198 0.82 -0.2 3,370,969 - Psest_3198 0.82 -0.8 3,371,098 + -1.0 3,371,098 + +0.1 3,371,098 + -0.4 3,371,098 + -0.2 3,371,098 + -0.9 3,371,098 + -1.0 3,371,098 + -3.3 3,371,162 + -3.2 3,371,162 + -0.1 3,371,163 - +1.2
Or see this region's nucleotide sequence