Experiment: Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2671 and Psest_2672 are separated by 72 nucleotides Psest_2672 and Psest_2673 are separated by 153 nucleotides
Psest_2671: Psest_2671 - Transcriptional regulator, at 2,858,772 to 2,859,665
_2671
Psest_2672: Psest_2672 - Predicted membrane protein, at 2,859,738 to 2,861,063
_2672
Psest_2673: Psest_2673 - Arabinose efflux permease, at 2,861,217 to 2,862,524
_2673
Position (kb)
2859
2860
2861
2862 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2859.053 kb on + strand, within Psest_2671 at 2859.054 kb on - strand, within Psest_2671 at 2859.343 kb on - strand, within Psest_2671 at 2859.401 kb on - strand, within Psest_2671 at 2859.547 kb on + strand, within Psest_2671 at 2859.548 kb on - strand, within Psest_2671 at 2859.618 kb on - strand at 2859.771 kb on + strand at 2859.771 kb on + strand at 2859.879 kb on + strand, within Psest_2672 at 2859.880 kb on - strand, within Psest_2672 at 2859.880 kb on - strand, within Psest_2672 at 2859.880 kb on - strand, within Psest_2672 at 2859.880 kb on - strand, within Psest_2672 at 2859.880 kb on - strand, within Psest_2672 at 2859.880 kb on - strand, within Psest_2672 at 2859.880 kb on - strand, within Psest_2672 at 2859.932 kb on + strand, within Psest_2672 at 2860.086 kb on + strand, within Psest_2672 at 2860.087 kb on - strand, within Psest_2672 at 2860.284 kb on + strand, within Psest_2672 at 2860.285 kb on - strand, within Psest_2672 at 2860.285 kb on - strand, within Psest_2672 at 2860.285 kb on - strand, within Psest_2672 at 2860.285 kb on - strand, within Psest_2672 at 2860.406 kb on - strand, within Psest_2672 at 2860.560 kb on + strand, within Psest_2672 at 2860.560 kb on + strand, within Psest_2672 at 2860.560 kb on + strand, within Psest_2672 at 2860.560 kb on + strand, within Psest_2672 at 2860.561 kb on - strand, within Psest_2672 at 2860.561 kb on - strand, within Psest_2672 at 2860.561 kb on - strand, within Psest_2672 at 2860.561 kb on - strand, within Psest_2672 at 2860.561 kb on - strand, within Psest_2672 at 2860.561 kb on - strand, within Psest_2672 at 2860.561 kb on - strand, within Psest_2672 at 2860.561 kb on - strand, within Psest_2672 at 2860.561 kb on - strand, within Psest_2672 at 2860.573 kb on - strand, within Psest_2672 at 2861.017 kb on + strand at 2861.017 kb on + strand at 2861.017 kb on + strand at 2861.185 kb on - strand at 2861.185 kb on - strand at 2861.185 kb on - strand at 2861.185 kb on - strand at 2861.185 kb on - strand at 2861.191 kb on + strand at 2861.191 kb on + strand at 2861.192 kb on - strand at 2861.192 kb on - strand at 2861.192 kb on - strand at 2861.200 kb on + strand at 2861.200 kb on + strand at 2861.204 kb on + strand at 2861.204 kb on + strand at 2861.205 kb on - strand at 2861.205 kb on - strand at 2861.205 kb on - strand at 2861.433 kb on - strand, within Psest_2673 at 2861.433 kb on - strand, within Psest_2673 at 2861.433 kb on - strand, within Psest_2673 at 2861.445 kb on + strand, within Psest_2673 at 2861.445 kb on + strand, within Psest_2673 at 2861.446 kb on - strand, within Psest_2673 at 2861.446 kb on - strand, within Psest_2673 at 2861.526 kb on + strand, within Psest_2673 at 2861.526 kb on + strand, within Psest_2673 at 2861.527 kb on - strand, within Psest_2673 at 2861.550 kb on + strand, within Psest_2673 at 2861.550 kb on + strand, within Psest_2673 at 2861.550 kb on + strand, within Psest_2673 at 2861.550 kb on + strand, within Psest_2673 at 2861.550 kb on + strand, within Psest_2673 at 2861.550 kb on + strand, within Psest_2673 at 2861.550 kb on + strand, within Psest_2673 at 2861.550 kb on + strand, within Psest_2673 at 2861.550 kb on + strand, within Psest_2673 at 2861.551 kb on - strand, within Psest_2673 at 2861.551 kb on - strand, within Psest_2673 at 2861.551 kb on - strand, within Psest_2673 at 2861.619 kb on + strand, within Psest_2673 at 2861.619 kb on + strand, within Psest_2673 at 2861.619 kb on + strand, within Psest_2673 at 2861.619 kb on + strand, within Psest_2673 at 2861.620 kb on - strand, within Psest_2673 at 2861.620 kb on - strand, within Psest_2673 at 2861.620 kb on - strand, within Psest_2673 at 2861.620 kb on - strand, within Psest_2673 at 2861.620 kb on - strand, within Psest_2673 at 2861.620 kb on - strand, within Psest_2673 at 2861.886 kb on + strand, within Psest_2673 at 2861.886 kb on + strand, within Psest_2673 at 2861.886 kb on + strand, within Psest_2673 at 2861.887 kb on - strand, within Psest_2673 at 2861.936 kb on + strand, within Psest_2673 at 2861.937 kb on - strand, within Psest_2673 at 2861.937 kb on - strand, within Psest_2673 at 2862.010 kb on + strand, within Psest_2673 at 2862.011 kb on - strand, within Psest_2673
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.002 mg/ml remove 2,859,053 + Psest_2671 0.31 -0.2 2,859,054 - Psest_2671 0.32 +1.3 2,859,343 - Psest_2671 0.64 -1.3 2,859,401 - Psest_2671 0.70 +0.7 2,859,547 + Psest_2671 0.87 -0.0 2,859,548 - Psest_2671 0.87 +1.9 2,859,618 - +1.1 2,859,771 + +0.4 2,859,771 + +0.1 2,859,879 + Psest_2672 0.11 +0.9 2,859,880 - Psest_2672 0.11 +1.5 2,859,880 - Psest_2672 0.11 +1.1 2,859,880 - Psest_2672 0.11 -0.3 2,859,880 - Psest_2672 0.11 +0.3 2,859,880 - Psest_2672 0.11 +0.4 2,859,880 - Psest_2672 0.11 +0.5 2,859,880 - Psest_2672 0.11 -0.8 2,859,932 + Psest_2672 0.15 +1.9 2,860,086 + Psest_2672 0.26 +0.2 2,860,087 - Psest_2672 0.26 +0.3 2,860,284 + Psest_2672 0.41 +1.9 2,860,285 - Psest_2672 0.41 -0.6 2,860,285 - Psest_2672 0.41 +0.3 2,860,285 - Psest_2672 0.41 +1.3 2,860,285 - Psest_2672 0.41 +0.6 2,860,406 - Psest_2672 0.50 +1.3 2,860,560 + Psest_2672 0.62 -0.0 2,860,560 + Psest_2672 0.62 +0.4 2,860,560 + Psest_2672 0.62 -0.6 2,860,560 + Psest_2672 0.62 +1.1 2,860,561 - Psest_2672 0.62 -0.9 2,860,561 - Psest_2672 0.62 +1.3 2,860,561 - Psest_2672 0.62 +0.3 2,860,561 - Psest_2672 0.62 +0.9 2,860,561 - Psest_2672 0.62 +1.3 2,860,561 - Psest_2672 0.62 +0.3 2,860,561 - Psest_2672 0.62 -1.8 2,860,561 - Psest_2672 0.62 +0.9 2,860,561 - Psest_2672 0.62 -0.0 2,860,573 - Psest_2672 0.63 +0.3 2,861,017 + -1.3 2,861,017 + +0.7 2,861,017 + -0.7 2,861,185 - -0.9 2,861,185 - -0.7 2,861,185 - +0.7 2,861,185 - -1.3 2,861,185 - +3.3 2,861,191 + -0.4 2,861,191 + -0.0 2,861,192 - +0.7 2,861,192 - -0.7 2,861,192 - -0.3 2,861,200 + -1.2 2,861,200 + +2.0 2,861,204 + -0.4 2,861,204 + -2.0 2,861,205 - -0.3 2,861,205 - +0.1 2,861,205 - -0.5 2,861,433 - Psest_2673 0.17 +0.0 2,861,433 - Psest_2673 0.17 -0.9 2,861,433 - Psest_2673 0.17 +0.2 2,861,445 + Psest_2673 0.17 +0.6 2,861,445 + Psest_2673 0.17 +0.3 2,861,446 - Psest_2673 0.18 -1.3 2,861,446 - Psest_2673 0.18 +0.6 2,861,526 + Psest_2673 0.24 -0.7 2,861,526 + Psest_2673 0.24 -0.0 2,861,527 - Psest_2673 0.24 -0.3 2,861,550 + Psest_2673 0.25 -0.2 2,861,550 + Psest_2673 0.25 -1.5 2,861,550 + Psest_2673 0.25 -0.1 2,861,550 + Psest_2673 0.25 -0.2 2,861,550 + Psest_2673 0.25 +0.3 2,861,550 + Psest_2673 0.25 -0.5 2,861,550 + Psest_2673 0.25 -1.2 2,861,550 + Psest_2673 0.25 +1.7 2,861,550 + Psest_2673 0.25 +0.6 2,861,551 - Psest_2673 0.26 -0.5 2,861,551 - Psest_2673 0.26 -1.9 2,861,551 - Psest_2673 0.26 +1.2 2,861,619 + Psest_2673 0.31 +0.2 2,861,619 + Psest_2673 0.31 -0.3 2,861,619 + Psest_2673 0.31 -0.5 2,861,619 + Psest_2673 0.31 +0.1 2,861,620 - Psest_2673 0.31 +0.1 2,861,620 - Psest_2673 0.31 -0.8 2,861,620 - Psest_2673 0.31 -1.9 2,861,620 - Psest_2673 0.31 -0.5 2,861,620 - Psest_2673 0.31 -1.2 2,861,620 - Psest_2673 0.31 +0.3 2,861,886 + Psest_2673 0.51 +0.4 2,861,886 + Psest_2673 0.51 +0.0 2,861,886 + Psest_2673 0.51 +0.4 2,861,887 - Psest_2673 0.51 -1.1 2,861,936 + Psest_2673 0.55 +0.5 2,861,937 - Psest_2673 0.55 -0.1 2,861,937 - Psest_2673 0.55 -0.1 2,862,010 + Psest_2673 0.61 +0.6 2,862,011 - Psest_2673 0.61 +0.4
Or see this region's nucleotide sequence