Experiment: Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2609 and Psest_2610 are separated by 53 nucleotides Psest_2610 and Psest_2611 are separated by 61 nucleotides
Psest_2609: Psest_2609 - Glycosyltransferase, at 2,792,358 to 2,793,461
_2609
Psest_2610: Psest_2610 - Predicted acyltransferases, at 2,793,515 to 2,794,552
_2610
Psest_2611: Psest_2611 - Glycosyltransferase, at 2,794,614 to 2,795,819
_2611
Position (kb)
2793
2794
2795 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2792.545 kb on + strand, within Psest_2609 at 2792.545 kb on + strand, within Psest_2609 at 2792.545 kb on + strand, within Psest_2609 at 2792.546 kb on - strand, within Psest_2609 at 2792.546 kb on - strand, within Psest_2609 at 2792.546 kb on - strand, within Psest_2609 at 2792.631 kb on + strand, within Psest_2609 at 2792.632 kb on - strand, within Psest_2609 at 2792.632 kb on - strand, within Psest_2609 at 2792.667 kb on + strand, within Psest_2609 at 2792.667 kb on + strand, within Psest_2609 at 2792.667 kb on + strand, within Psest_2609 at 2792.667 kb on + strand, within Psest_2609 at 2792.667 kb on + strand, within Psest_2609 at 2792.667 kb on + strand, within Psest_2609 at 2792.668 kb on - strand, within Psest_2609 at 2792.668 kb on - strand, within Psest_2609 at 2792.668 kb on - strand, within Psest_2609 at 2792.668 kb on - strand, within Psest_2609 at 2792.668 kb on - strand, within Psest_2609 at 2792.668 kb on - strand, within Psest_2609 at 2792.668 kb on - strand, within Psest_2609 at 2792.668 kb on - strand, within Psest_2609 at 2792.668 kb on - strand, within Psest_2609 at 2792.668 kb on - strand, within Psest_2609 at 2792.688 kb on + strand, within Psest_2609 at 2792.689 kb on - strand, within Psest_2609 at 2792.712 kb on + strand, within Psest_2609 at 2792.712 kb on + strand, within Psest_2609 at 2792.712 kb on + strand, within Psest_2609 at 2792.712 kb on + strand, within Psest_2609 at 2792.712 kb on + strand, within Psest_2609 at 2792.713 kb on - strand, within Psest_2609 at 2792.713 kb on - strand, within Psest_2609 at 2792.713 kb on - strand, within Psest_2609 at 2792.800 kb on - strand, within Psest_2609 at 2792.902 kb on + strand, within Psest_2609 at 2792.903 kb on - strand, within Psest_2609 at 2792.903 kb on - strand, within Psest_2609 at 2792.903 kb on - strand, within Psest_2609 at 2792.903 kb on - strand, within Psest_2609 at 2793.054 kb on - strand, within Psest_2609 at 2793.065 kb on + strand, within Psest_2609 at 2793.066 kb on - strand, within Psest_2609 at 2793.066 kb on - strand, within Psest_2609 at 2793.066 kb on - strand, within Psest_2609 at 2793.127 kb on + strand, within Psest_2609 at 2793.141 kb on + strand, within Psest_2609 at 2793.141 kb on + strand, within Psest_2609 at 2793.141 kb on + strand, within Psest_2609 at 2793.141 kb on + strand, within Psest_2609 at 2793.141 kb on + strand, within Psest_2609 at 2793.142 kb on - strand, within Psest_2609 at 2793.142 kb on - strand, within Psest_2609 at 2793.142 kb on - strand, within Psest_2609 at 2793.142 kb on - strand, within Psest_2609 at 2793.247 kb on - strand, within Psest_2609 at 2793.247 kb on - strand, within Psest_2609 at 2793.295 kb on + strand, within Psest_2609 at 2793.295 kb on + strand, within Psest_2609 at 2793.296 kb on - strand, within Psest_2609 at 2793.296 kb on - strand, within Psest_2609 at 2793.296 kb on - strand, within Psest_2609 at 2793.296 kb on - strand, within Psest_2609 at 2793.357 kb on + strand at 2793.561 kb on + strand at 2793.561 kb on + strand at 2793.562 kb on - strand at 2793.604 kb on + strand at 2793.759 kb on - strand, within Psest_2610 at 2793.759 kb on - strand, within Psest_2610 at 2793.896 kb on + strand, within Psest_2610 at 2793.896 kb on + strand, within Psest_2610 at 2793.897 kb on - strand, within Psest_2610 at 2793.897 kb on - strand, within Psest_2610 at 2794.080 kb on - strand, within Psest_2610 at 2794.106 kb on + strand, within Psest_2610 at 2794.107 kb on - strand, within Psest_2610 at 2794.107 kb on - strand, within Psest_2610 at 2794.107 kb on - strand, within Psest_2610 at 2794.130 kb on + strand, within Psest_2610 at 2794.131 kb on - strand, within Psest_2610 at 2794.140 kb on - strand, within Psest_2610 at 2794.140 kb on - strand, within Psest_2610 at 2794.140 kb on - strand, within Psest_2610 at 2794.155 kb on - strand, within Psest_2610 at 2794.155 kb on - strand, within Psest_2610 at 2794.167 kb on + strand, within Psest_2610 at 2794.167 kb on + strand, within Psest_2610 at 2794.168 kb on - strand, within Psest_2610 at 2794.168 kb on - strand, within Psest_2610 at 2794.176 kb on + strand, within Psest_2610 at 2794.176 kb on + strand, within Psest_2610 at 2794.176 kb on + strand, within Psest_2610 at 2794.177 kb on - strand, within Psest_2610 at 2794.177 kb on - strand, within Psest_2610 at 2794.177 kb on - strand, within Psest_2610 at 2794.232 kb on + strand, within Psest_2610 at 2794.232 kb on + strand, within Psest_2610 at 2794.233 kb on - strand, within Psest_2610 at 2794.233 kb on - strand, within Psest_2610 at 2794.320 kb on - strand, within Psest_2610 at 2794.328 kb on + strand, within Psest_2610 at 2794.328 kb on + strand, within Psest_2610 at 2794.329 kb on - strand, within Psest_2610 at 2794.329 kb on - strand, within Psest_2610 at 2794.332 kb on + strand, within Psest_2610 at 2794.332 kb on + strand, within Psest_2610 at 2794.332 kb on + strand, within Psest_2610 at 2794.332 kb on + strand, within Psest_2610 at 2794.332 kb on + strand, within Psest_2610 at 2794.332 kb on + strand, within Psest_2610 at 2794.332 kb on + strand, within Psest_2610 at 2794.333 kb on - strand, within Psest_2610 at 2794.333 kb on - strand, within Psest_2610 at 2794.333 kb on - strand, within Psest_2610 at 2794.333 kb on - strand, within Psest_2610 at 2794.333 kb on - strand, within Psest_2610 at 2794.333 kb on - strand, within Psest_2610 at 2794.333 kb on - strand, within Psest_2610 at 2794.333 kb on - strand, within Psest_2610 at 2794.333 kb on - strand, within Psest_2610 at 2794.333 kb on - strand, within Psest_2610 at 2794.333 kb on - strand, within Psest_2610 at 2794.543 kb on + strand at 2794.650 kb on + strand at 2794.650 kb on + strand at 2794.821 kb on + strand, within Psest_2611 at 2794.821 kb on + strand, within Psest_2611 at 2794.821 kb on + strand, within Psest_2611 at 2794.821 kb on + strand, within Psest_2611 at 2794.822 kb on - strand, within Psest_2611 at 2794.822 kb on - strand, within Psest_2611 at 2794.822 kb on - strand, within Psest_2611 at 2794.869 kb on + strand, within Psest_2611 at 2794.869 kb on + strand, within Psest_2611 at 2794.869 kb on + strand, within Psest_2611 at 2794.937 kb on + strand, within Psest_2611 at 2794.944 kb on + strand, within Psest_2611 at 2794.944 kb on + strand, within Psest_2611 at 2794.944 kb on + strand, within Psest_2611 at 2794.945 kb on - strand, within Psest_2611 at 2794.945 kb on - strand, within Psest_2611 at 2794.990 kb on - strand, within Psest_2611 at 2795.052 kb on + strand, within Psest_2611 at 2795.052 kb on + strand, within Psest_2611 at 2795.052 kb on + strand, within Psest_2611 at 2795.052 kb on + strand, within Psest_2611 at 2795.052 kb on + strand, within Psest_2611 at 2795.052 kb on + strand, within Psest_2611 at 2795.052 kb on + strand, within Psest_2611 at 2795.052 kb on + strand, within Psest_2611 at 2795.052 kb on + strand, within Psest_2611 at 2795.052 kb on + strand, within Psest_2611 at 2795.052 kb on + strand, within Psest_2611 at 2795.053 kb on - strand, within Psest_2611 at 2795.053 kb on - strand, within Psest_2611 at 2795.053 kb on - strand, within Psest_2611 at 2795.053 kb on - strand, within Psest_2611 at 2795.053 kb on - strand, within Psest_2611 at 2795.053 kb on - strand, within Psest_2611 at 2795.053 kb on - strand, within Psest_2611 at 2795.053 kb on - strand, within Psest_2611 at 2795.053 kb on - strand, within Psest_2611 at 2795.053 kb on - strand, within Psest_2611 at 2795.053 kb on - strand, within Psest_2611 at 2795.053 kb on - strand, within Psest_2611 at 2795.166 kb on + strand, within Psest_2611 at 2795.167 kb on - strand, within Psest_2611 at 2795.167 kb on - strand, within Psest_2611 at 2795.220 kb on + strand, within Psest_2611 at 2795.220 kb on + strand, within Psest_2611 at 2795.220 kb on + strand, within Psest_2611 at 2795.220 kb on + strand, within Psest_2611 at 2795.221 kb on - strand, within Psest_2611 at 2795.221 kb on - strand, within Psest_2611 at 2795.221 kb on - strand, within Psest_2611 at 2795.221 kb on - strand, within Psest_2611 at 2795.223 kb on - strand, within Psest_2611
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.002 mg/ml remove 2,792,545 + Psest_2609 0.17 -0.7 2,792,545 + Psest_2609 0.17 -0.3 2,792,545 + Psest_2609 0.17 -0.8 2,792,546 - Psest_2609 0.17 +0.5 2,792,546 - Psest_2609 0.17 +0.2 2,792,546 - Psest_2609 0.17 -0.1 2,792,631 + Psest_2609 0.25 -0.6 2,792,632 - Psest_2609 0.25 -0.5 2,792,632 - Psest_2609 0.25 +0.4 2,792,667 + Psest_2609 0.28 +0.3 2,792,667 + Psest_2609 0.28 -2.9 2,792,667 + Psest_2609 0.28 +0.1 2,792,667 + Psest_2609 0.28 -0.7 2,792,667 + Psest_2609 0.28 +0.5 2,792,667 + Psest_2609 0.28 -0.3 2,792,668 - Psest_2609 0.28 +0.7 2,792,668 - Psest_2609 0.28 +0.3 2,792,668 - Psest_2609 0.28 +0.4 2,792,668 - Psest_2609 0.28 -0.3 2,792,668 - Psest_2609 0.28 +0.4 2,792,668 - Psest_2609 0.28 +0.2 2,792,668 - Psest_2609 0.28 -0.1 2,792,668 - Psest_2609 0.28 +0.1 2,792,668 - Psest_2609 0.28 +0.6 2,792,668 - Psest_2609 0.28 -2.0 2,792,688 + Psest_2609 0.30 -0.6 2,792,689 - Psest_2609 0.30 +0.4 2,792,712 + Psest_2609 0.32 -0.3 2,792,712 + Psest_2609 0.32 -1.8 2,792,712 + Psest_2609 0.32 -1.3 2,792,712 + Psest_2609 0.32 -0.6 2,792,712 + Psest_2609 0.32 -0.4 2,792,713 - Psest_2609 0.32 +0.5 2,792,713 - Psest_2609 0.32 +0.2 2,792,713 - Psest_2609 0.32 +0.6 2,792,800 - Psest_2609 0.40 +0.1 2,792,902 + Psest_2609 0.49 +0.0 2,792,903 - Psest_2609 0.49 -0.2 2,792,903 - Psest_2609 0.49 +0.3 2,792,903 - Psest_2609 0.49 -0.5 2,792,903 - Psest_2609 0.49 +0.0 2,793,054 - Psest_2609 0.63 -0.3 2,793,065 + Psest_2609 0.64 -1.7 2,793,066 - Psest_2609 0.64 -0.1 2,793,066 - Psest_2609 0.64 +0.5 2,793,066 - Psest_2609 0.64 -0.6 2,793,127 + Psest_2609 0.70 -0.4 2,793,141 + Psest_2609 0.71 +0.2 2,793,141 + Psest_2609 0.71 -0.4 2,793,141 + Psest_2609 0.71 -1.3 2,793,141 + Psest_2609 0.71 -0.9 2,793,141 + Psest_2609 0.71 -1.0 2,793,142 - Psest_2609 0.71 -0.3 2,793,142 - Psest_2609 0.71 -0.3 2,793,142 - Psest_2609 0.71 +0.3 2,793,142 - Psest_2609 0.71 -1.1 2,793,247 - Psest_2609 0.81 -0.8 2,793,247 - Psest_2609 0.81 -0.7 2,793,295 + Psest_2609 0.85 -0.1 2,793,295 + Psest_2609 0.85 -0.8 2,793,296 - Psest_2609 0.85 -0.5 2,793,296 - Psest_2609 0.85 +0.7 2,793,296 - Psest_2609 0.85 -0.0 2,793,296 - Psest_2609 0.85 -0.4 2,793,357 + -1.3 2,793,561 + -1.4 2,793,561 + -0.5 2,793,562 - +0.1 2,793,604 + +0.5 2,793,759 - Psest_2610 0.24 +1.0 2,793,759 - Psest_2610 0.24 +0.1 2,793,896 + Psest_2610 0.37 -0.2 2,793,896 + Psest_2610 0.37 -0.1 2,793,897 - Psest_2610 0.37 -1.1 2,793,897 - Psest_2610 0.37 -1.0 2,794,080 - Psest_2610 0.54 +0.3 2,794,106 + Psest_2610 0.57 -0.0 2,794,107 - Psest_2610 0.57 +0.3 2,794,107 - Psest_2610 0.57 -0.2 2,794,107 - Psest_2610 0.57 -1.5 2,794,130 + Psest_2610 0.59 -0.1 2,794,131 - Psest_2610 0.59 -0.4 2,794,140 - Psest_2610 0.60 -0.0 2,794,140 - Psest_2610 0.60 -2.4 2,794,140 - Psest_2610 0.60 -0.7 2,794,155 - Psest_2610 0.62 -2.0 2,794,155 - Psest_2610 0.62 -0.3 2,794,167 + Psest_2610 0.63 +0.5 2,794,167 + Psest_2610 0.63 -0.4 2,794,168 - Psest_2610 0.63 -0.7 2,794,168 - Psest_2610 0.63 +0.3 2,794,176 + Psest_2610 0.64 -1.0 2,794,176 + Psest_2610 0.64 -0.7 2,794,176 + Psest_2610 0.64 -0.5 2,794,177 - Psest_2610 0.64 -1.7 2,794,177 - Psest_2610 0.64 -0.7 2,794,177 - Psest_2610 0.64 +0.7 2,794,232 + Psest_2610 0.69 -0.9 2,794,232 + Psest_2610 0.69 -0.5 2,794,233 - Psest_2610 0.69 -0.7 2,794,233 - Psest_2610 0.69 -0.6 2,794,320 - Psest_2610 0.78 -1.5 2,794,328 + Psest_2610 0.78 -1.3 2,794,328 + Psest_2610 0.78 -0.7 2,794,329 - Psest_2610 0.78 -0.4 2,794,329 - Psest_2610 0.78 -0.8 2,794,332 + Psest_2610 0.79 -2.4 2,794,332 + Psest_2610 0.79 +0.4 2,794,332 + Psest_2610 0.79 +0.3 2,794,332 + Psest_2610 0.79 -0.6 2,794,332 + Psest_2610 0.79 -1.0 2,794,332 + Psest_2610 0.79 -0.9 2,794,332 + Psest_2610 0.79 -1.4 2,794,333 - Psest_2610 0.79 -0.9 2,794,333 - Psest_2610 0.79 -1.7 2,794,333 - Psest_2610 0.79 +0.2 2,794,333 - Psest_2610 0.79 -0.7 2,794,333 - Psest_2610 0.79 -1.2 2,794,333 - Psest_2610 0.79 +0.1 2,794,333 - Psest_2610 0.79 -0.6 2,794,333 - Psest_2610 0.79 -1.3 2,794,333 - Psest_2610 0.79 -1.5 2,794,333 - Psest_2610 0.79 -0.6 2,794,333 - Psest_2610 0.79 -0.3 2,794,543 + -0.9 2,794,650 + -0.4 2,794,650 + +0.7 2,794,821 + Psest_2611 0.17 -0.7 2,794,821 + Psest_2611 0.17 -0.8 2,794,821 + Psest_2611 0.17 -2.4 2,794,821 + Psest_2611 0.17 +0.4 2,794,822 - Psest_2611 0.17 -0.5 2,794,822 - Psest_2611 0.17 -2.2 2,794,822 - Psest_2611 0.17 -0.6 2,794,869 + Psest_2611 0.21 -1.1 2,794,869 + Psest_2611 0.21 +1.5 2,794,869 + Psest_2611 0.21 -0.3 2,794,937 + Psest_2611 0.27 -0.7 2,794,944 + Psest_2611 0.27 +0.4 2,794,944 + Psest_2611 0.27 -1.2 2,794,944 + Psest_2611 0.27 +0.3 2,794,945 - Psest_2611 0.27 -0.5 2,794,945 - Psest_2611 0.27 +0.7 2,794,990 - Psest_2611 0.31 -0.2 2,795,052 + Psest_2611 0.36 -1.2 2,795,052 + Psest_2611 0.36 -1.6 2,795,052 + Psest_2611 0.36 -0.5 2,795,052 + Psest_2611 0.36 +0.4 2,795,052 + Psest_2611 0.36 -0.6 2,795,052 + Psest_2611 0.36 -0.9 2,795,052 + Psest_2611 0.36 -1.6 2,795,052 + Psest_2611 0.36 -0.6 2,795,052 + Psest_2611 0.36 -0.5 2,795,052 + Psest_2611 0.36 -0.8 2,795,052 + Psest_2611 0.36 +0.3 2,795,053 - Psest_2611 0.36 -1.1 2,795,053 - Psest_2611 0.36 +0.6 2,795,053 - Psest_2611 0.36 -1.0 2,795,053 - Psest_2611 0.36 -0.5 2,795,053 - Psest_2611 0.36 -1.5 2,795,053 - Psest_2611 0.36 -0.5 2,795,053 - Psest_2611 0.36 -1.0 2,795,053 - Psest_2611 0.36 +0.7 2,795,053 - Psest_2611 0.36 -0.5 2,795,053 - Psest_2611 0.36 -0.0 2,795,053 - Psest_2611 0.36 +0.5 2,795,053 - Psest_2611 0.36 -0.4 2,795,166 + Psest_2611 0.46 -1.8 2,795,167 - Psest_2611 0.46 -0.8 2,795,167 - Psest_2611 0.46 +0.5 2,795,220 + Psest_2611 0.50 +0.1 2,795,220 + Psest_2611 0.50 -1.1 2,795,220 + Psest_2611 0.50 -0.6 2,795,220 + Psest_2611 0.50 -2.6 2,795,221 - Psest_2611 0.50 -0.9 2,795,221 - Psest_2611 0.50 +2.9 2,795,221 - Psest_2611 0.50 -1.0 2,795,221 - Psest_2611 0.50 +1.0 2,795,223 - Psest_2611 0.50 -0.7
Or see this region's nucleotide sequence