Experiment: Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2416 and Psest_2417 are separated by 74 nucleotides
Psest_2416: Psest_2416 - 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase), at 2,575,200 to 2,577,116
_2416
Psest_2417: Psest_2417 - TonB-dependent receptor, at 2,577,191 to 2,579,674
_2417
Position (kb)
2577
2578
2579
2580 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 2576.527 kb on + strand, within Psest_2416 at 2576.743 kb on + strand, within Psest_2416 at 2577.223 kb on - strand at 2577.223 kb on - strand at 2577.223 kb on - strand at 2577.255 kb on + strand at 2577.255 kb on + strand at 2577.255 kb on + strand at 2577.255 kb on + strand at 2577.256 kb on - strand at 2577.256 kb on - strand at 2577.279 kb on + strand at 2577.279 kb on + strand at 2577.279 kb on + strand at 2577.279 kb on + strand at 2577.279 kb on + strand at 2577.279 kb on + strand at 2577.279 kb on + strand at 2577.280 kb on - strand at 2577.280 kb on - strand at 2577.280 kb on - strand at 2577.280 kb on - strand at 2577.280 kb on - strand at 2577.280 kb on - strand at 2577.280 kb on - strand at 2577.280 kb on - strand at 2577.280 kb on - strand at 2577.280 kb on - strand at 2577.280 kb on - strand at 2577.282 kb on + strand at 2577.282 kb on + strand at 2577.282 kb on + strand at 2577.282 kb on + strand at 2577.282 kb on + strand at 2577.282 kb on + strand at 2577.283 kb on - strand at 2577.283 kb on - strand at 2577.381 kb on + strand at 2577.381 kb on + strand at 2577.381 kb on + strand at 2577.426 kb on + strand at 2577.427 kb on - strand at 2577.438 kb on + strand at 2577.438 kb on + strand at 2577.439 kb on - strand at 2577.439 kb on - strand at 2577.590 kb on + strand, within Psest_2417 at 2577.591 kb on - strand, within Psest_2417 at 2577.657 kb on + strand, within Psest_2417 at 2577.741 kb on + strand, within Psest_2417 at 2577.741 kb on + strand, within Psest_2417 at 2577.741 kb on + strand, within Psest_2417 at 2577.742 kb on - strand, within Psest_2417 at 2577.742 kb on - strand, within Psest_2417 at 2577.742 kb on - strand, within Psest_2417 at 2577.765 kb on + strand, within Psest_2417 at 2577.766 kb on - strand, within Psest_2417 at 2577.766 kb on - strand, within Psest_2417 at 2577.766 kb on - strand, within Psest_2417 at 2577.766 kb on - strand, within Psest_2417 at 2577.766 kb on - strand, within Psest_2417 at 2577.766 kb on - strand, within Psest_2417 at 2577.774 kb on + strand, within Psest_2417 at 2577.804 kb on + strand, within Psest_2417 at 2577.804 kb on + strand, within Psest_2417 at 2577.804 kb on + strand, within Psest_2417 at 2577.804 kb on + strand, within Psest_2417 at 2577.804 kb on + strand, within Psest_2417 at 2577.804 kb on + strand, within Psest_2417 at 2577.804 kb on + strand, within Psest_2417 at 2577.805 kb on - strand, within Psest_2417 at 2577.825 kb on + strand, within Psest_2417 at 2578.200 kb on + strand, within Psest_2417 at 2578.201 kb on - strand, within Psest_2417 at 2578.201 kb on - strand, within Psest_2417 at 2578.422 kb on + strand, within Psest_2417 at 2578.518 kb on + strand, within Psest_2417 at 2578.695 kb on + strand, within Psest_2417 at 2578.695 kb on + strand, within Psest_2417 at 2578.695 kb on + strand, within Psest_2417 at 2578.695 kb on + strand, within Psest_2417 at 2578.695 kb on + strand, within Psest_2417 at 2578.695 kb on + strand, within Psest_2417 at 2578.695 kb on + strand, within Psest_2417 at 2578.695 kb on + strand, within Psest_2417 at 2578.695 kb on + strand, within Psest_2417 at 2578.696 kb on - strand, within Psest_2417 at 2578.696 kb on - strand, within Psest_2417 at 2578.696 kb on - strand, within Psest_2417 at 2578.696 kb on - strand, within Psest_2417 at 2578.696 kb on - strand, within Psest_2417 at 2578.696 kb on - strand, within Psest_2417 at 2578.696 kb on - strand, within Psest_2417 at 2578.833 kb on + strand, within Psest_2417 at 2578.833 kb on + strand, within Psest_2417 at 2578.834 kb on - strand, within Psest_2417 at 2578.849 kb on - strand, within Psest_2417 at 2578.851 kb on + strand, within Psest_2417 at 2578.851 kb on + strand, within Psest_2417 at 2578.851 kb on + strand, within Psest_2417 at 2578.851 kb on + strand, within Psest_2417 at 2578.851 kb on + strand, within Psest_2417 at 2578.852 kb on - strand, within Psest_2417 at 2578.852 kb on - strand, within Psest_2417 at 2578.852 kb on - strand, within Psest_2417 at 2578.852 kb on - strand, within Psest_2417 at 2578.852 kb on - strand, within Psest_2417 at 2578.875 kb on + strand, within Psest_2417 at 2578.876 kb on - strand, within Psest_2417 at 2578.876 kb on - strand, within Psest_2417 at 2578.876 kb on - strand, within Psest_2417 at 2579.151 kb on + strand, within Psest_2417 at 2579.151 kb on + strand, within Psest_2417 at 2579.151 kb on + strand, within Psest_2417 at 2579.152 kb on - strand, within Psest_2417 at 2579.664 kb on + strand at 2579.664 kb on + strand at 2579.665 kb on - strand at 2579.665 kb on - strand at 2579.665 kb on - strand at 2579.821 kb on + strand at 2579.988 kb on - strand at 2580.013 kb on - strand at 2580.013 kb on - strand at 2580.133 kb on + strand at 2580.134 kb on - strand at 2580.295 kb on - strand at 2580.546 kb on + strand at 2580.546 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.002 mg/ml remove 2,576,527 + Psest_2416 0.69 -1.6 2,576,743 + Psest_2416 0.80 +1.8 2,577,223 - -0.4 2,577,223 - +0.6 2,577,223 - +1.8 2,577,255 + -0.1 2,577,255 + +1.6 2,577,255 + -0.1 2,577,255 + +3.0 2,577,256 - +0.2 2,577,256 - +1.2 2,577,279 + +0.1 2,577,279 + -0.0 2,577,279 + +2.2 2,577,279 + +0.2 2,577,279 + -1.6 2,577,279 + +0.2 2,577,279 + +1.8 2,577,280 - +0.6 2,577,280 - -1.6 2,577,280 - +0.5 2,577,280 - +0.2 2,577,280 - +0.2 2,577,280 - -0.4 2,577,280 - +2.8 2,577,280 - -0.8 2,577,280 - +2.8 2,577,280 - -1.4 2,577,280 - -0.1 2,577,282 + +0.9 2,577,282 + +0.2 2,577,282 + +0.4 2,577,282 + +0.6 2,577,282 + +0.6 2,577,282 + -0.2 2,577,283 - +2.8 2,577,283 - +1.2 2,577,381 + +2.2 2,577,381 + -0.3 2,577,381 + -1.1 2,577,426 + +0.4 2,577,427 - +1.2 2,577,438 + +0.4 2,577,438 + -0.8 2,577,439 - -0.6 2,577,439 - -0.4 2,577,590 + Psest_2417 0.16 +0.4 2,577,591 - Psest_2417 0.16 +0.6 2,577,657 + Psest_2417 0.19 +2.2 2,577,741 + Psest_2417 0.22 -1.4 2,577,741 + Psest_2417 0.22 +1.0 2,577,741 + Psest_2417 0.22 +1.0 2,577,742 - Psest_2417 0.22 -1.0 2,577,742 - Psest_2417 0.22 -0.3 2,577,742 - Psest_2417 0.22 +1.5 2,577,765 + Psest_2417 0.23 -0.4 2,577,766 - Psest_2417 0.23 -0.2 2,577,766 - Psest_2417 0.23 +1.2 2,577,766 - Psest_2417 0.23 +1.6 2,577,766 - Psest_2417 0.23 -0.4 2,577,766 - Psest_2417 0.23 +0.9 2,577,766 - Psest_2417 0.23 +1.5 2,577,774 + Psest_2417 0.23 +1.6 2,577,804 + Psest_2417 0.25 -0.2 2,577,804 + Psest_2417 0.25 +0.3 2,577,804 + Psest_2417 0.25 -0.6 2,577,804 + Psest_2417 0.25 +3.0 2,577,804 + Psest_2417 0.25 +0.9 2,577,804 + Psest_2417 0.25 +0.2 2,577,804 + Psest_2417 0.25 -0.2 2,577,805 - Psest_2417 0.25 +0.2 2,577,825 + Psest_2417 0.26 +1.6 2,578,200 + Psest_2417 0.41 +0.1 2,578,201 - Psest_2417 0.41 +1.7 2,578,201 - Psest_2417 0.41 -0.6 2,578,422 + Psest_2417 0.50 +0.9 2,578,518 + Psest_2417 0.53 -0.2 2,578,695 + Psest_2417 0.61 +0.5 2,578,695 + Psest_2417 0.61 +0.2 2,578,695 + Psest_2417 0.61 +0.4 2,578,695 + Psest_2417 0.61 +0.5 2,578,695 + Psest_2417 0.61 +2.2 2,578,695 + Psest_2417 0.61 +1.4 2,578,695 + Psest_2417 0.61 +1.8 2,578,695 + Psest_2417 0.61 +2.7 2,578,695 + Psest_2417 0.61 +0.6 2,578,696 - Psest_2417 0.61 +0.1 2,578,696 - Psest_2417 0.61 +0.1 2,578,696 - Psest_2417 0.61 +2.2 2,578,696 - Psest_2417 0.61 +1.2 2,578,696 - Psest_2417 0.61 -0.5 2,578,696 - Psest_2417 0.61 -0.8 2,578,696 - Psest_2417 0.61 -1.1 2,578,833 + Psest_2417 0.66 -0.8 2,578,833 + Psest_2417 0.66 -0.4 2,578,834 - Psest_2417 0.66 +1.7 2,578,849 - Psest_2417 0.67 -0.5 2,578,851 + Psest_2417 0.67 +3.8 2,578,851 + Psest_2417 0.67 +2.8 2,578,851 + Psest_2417 0.67 -0.0 2,578,851 + Psest_2417 0.67 +1.5 2,578,851 + Psest_2417 0.67 -0.3 2,578,852 - Psest_2417 0.67 +0.6 2,578,852 - Psest_2417 0.67 +0.2 2,578,852 - Psest_2417 0.67 +0.8 2,578,852 - Psest_2417 0.67 +0.8 2,578,852 - Psest_2417 0.67 -1.6 2,578,875 + Psest_2417 0.68 +0.2 2,578,876 - Psest_2417 0.68 +0.6 2,578,876 - Psest_2417 0.68 -0.4 2,578,876 - Psest_2417 0.68 +1.2 2,579,151 + Psest_2417 0.79 +0.3 2,579,151 + Psest_2417 0.79 +1.0 2,579,151 + Psest_2417 0.79 +0.4 2,579,152 - Psest_2417 0.79 -0.7 2,579,664 + +0.2 2,579,664 + +0.1 2,579,665 - -0.7 2,579,665 - +0.1 2,579,665 - +0.9 2,579,821 + +0.6 2,579,988 - -1.1 2,580,013 - -0.1 2,580,013 - +0.5 2,580,133 + -0.8 2,580,134 - -0.2 2,580,295 - +0.3 2,580,546 + -0.6 2,580,546 + -0.0
Or see this region's nucleotide sequence