Experiment: Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2361 and Psest_2362 overlap by 4 nucleotides Psest_2362 and Psest_2363 overlap by 4 nucleotides Psest_2363 and Psest_2364 overlap by 4 nucleotides Psest_2364 and Psest_2365 are separated by 2 nucleotides
Psest_2361: Psest_2361 - Amidases related to nicotinamidase, at 2,515,685 to 2,516,341
_2361
Psest_2362: Psest_2362 - Zn-dependent hydrolases, including glyoxylases, at 2,516,338 to 2,517,120
_2362
Psest_2363: Psest_2363 - hypothetical protein, at 2,517,117 to 2,517,926
_2363
Psest_2364: Psest_2364 - ABC-type nitrate/sulfonate/bicarbonate transport system, permease component, at 2,517,923 to 2,518,801
_2364
Psest_2365: Psest_2365 - ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component, at 2,518,804 to 2,519,643
_2365
Position (kb)
2517
2518 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2516.387 kb on - strand at 2516.404 kb on - strand at 2516.504 kb on - strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.640 kb on - strand, within Psest_2362 at 2516.640 kb on - strand, within Psest_2362 at 2516.640 kb on - strand, within Psest_2362 at 2516.640 kb on - strand, within Psest_2362 at 2516.640 kb on - strand, within Psest_2362 at 2516.640 kb on - strand, within Psest_2362 at 2516.640 kb on - strand, within Psest_2362 at 2516.717 kb on + strand, within Psest_2362 at 2516.717 kb on + strand, within Psest_2362 at 2516.717 kb on + strand, within Psest_2362 at 2516.717 kb on + strand, within Psest_2362 at 2516.718 kb on - strand, within Psest_2362 at 2516.718 kb on - strand, within Psest_2362 at 2516.718 kb on - strand, within Psest_2362 at 2516.718 kb on - strand, within Psest_2362 at 2516.764 kb on + strand, within Psest_2362 at 2516.765 kb on - strand, within Psest_2362 at 2517.109 kb on + strand at 2517.139 kb on - strand at 2517.208 kb on - strand, within Psest_2363 at 2517.208 kb on - strand, within Psest_2363 at 2517.208 kb on - strand, within Psest_2363 at 2517.208 kb on - strand, within Psest_2363 at 2517.362 kb on + strand, within Psest_2363 at 2517.362 kb on + strand, within Psest_2363 at 2517.363 kb on - strand, within Psest_2363 at 2517.363 kb on - strand, within Psest_2363 at 2517.363 kb on - strand, within Psest_2363 at 2517.477 kb on + strand, within Psest_2363 at 2517.478 kb on - strand, within Psest_2363 at 2517.588 kb on + strand, within Psest_2363 at 2517.588 kb on + strand, within Psest_2363 at 2517.588 kb on + strand, within Psest_2363 at 2517.589 kb on - strand, within Psest_2363 at 2517.656 kb on - strand, within Psest_2363 at 2517.656 kb on - strand, within Psest_2363 at 2517.796 kb on - strand, within Psest_2363 at 2517.905 kb on + strand at 2518.289 kb on + strand, within Psest_2364 at 2518.289 kb on + strand, within Psest_2364 at 2518.290 kb on - strand, within Psest_2364 at 2518.290 kb on - strand, within Psest_2364 at 2518.349 kb on + strand, within Psest_2364 at 2518.350 kb on - strand, within Psest_2364 at 2518.350 kb on - strand, within Psest_2364 at 2518.350 kb on - strand, within Psest_2364 at 2518.616 kb on + strand, within Psest_2364 at 2518.617 kb on - strand, within Psest_2364 at 2518.685 kb on + strand, within Psest_2364 at 2518.685 kb on + strand, within Psest_2364 at 2518.685 kb on + strand, within Psest_2364 at 2518.685 kb on + strand, within Psest_2364 at 2518.685 kb on + strand, within Psest_2364 at 2518.685 kb on + strand, within Psest_2364 at 2518.686 kb on - strand, within Psest_2364 at 2518.686 kb on - strand, within Psest_2364 at 2518.686 kb on - strand, within Psest_2364
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.002 mg/ml remove 2,516,387 - +2.2 2,516,404 - -0.3 2,516,504 - Psest_2362 0.21 -0.8 2,516,639 + Psest_2362 0.38 -0.3 2,516,639 + Psest_2362 0.38 +1.2 2,516,639 + Psest_2362 0.38 +0.2 2,516,639 + Psest_2362 0.38 +0.2 2,516,639 + Psest_2362 0.38 +0.8 2,516,639 + Psest_2362 0.38 -0.3 2,516,639 + Psest_2362 0.38 +0.0 2,516,639 + Psest_2362 0.38 +0.2 2,516,639 + Psest_2362 0.38 +0.2 2,516,639 + Psest_2362 0.38 +0.2 2,516,639 + Psest_2362 0.38 +0.7 2,516,639 + Psest_2362 0.38 +0.9 2,516,639 + Psest_2362 0.38 +0.2 2,516,639 + Psest_2362 0.38 +1.2 2,516,639 + Psest_2362 0.38 +0.8 2,516,640 - Psest_2362 0.39 -0.3 2,516,640 - Psest_2362 0.39 -0.8 2,516,640 - Psest_2362 0.39 +1.2 2,516,640 - Psest_2362 0.39 +1.2 2,516,640 - Psest_2362 0.39 +2.2 2,516,640 - Psest_2362 0.39 +0.7 2,516,640 - Psest_2362 0.39 +0.2 2,516,717 + Psest_2362 0.48 +0.2 2,516,717 + Psest_2362 0.48 +1.2 2,516,717 + Psest_2362 0.48 +2.2 2,516,717 + Psest_2362 0.48 -1.8 2,516,718 - Psest_2362 0.49 +0.5 2,516,718 - Psest_2362 0.49 -0.1 2,516,718 - Psest_2362 0.49 -0.3 2,516,718 - Psest_2362 0.49 +0.8 2,516,764 + Psest_2362 0.54 +0.8 2,516,765 - Psest_2362 0.55 +0.2 2,517,109 + -1.1 2,517,139 - +0.2 2,517,208 - Psest_2363 0.11 +1.2 2,517,208 - Psest_2363 0.11 +2.8 2,517,208 - Psest_2363 0.11 +1.2 2,517,208 - Psest_2363 0.11 +1.2 2,517,362 + Psest_2363 0.30 +0.7 2,517,362 + Psest_2363 0.30 +0.2 2,517,363 - Psest_2363 0.30 +0.7 2,517,363 - Psest_2363 0.30 +2.2 2,517,363 - Psest_2363 0.30 +1.2 2,517,477 + Psest_2363 0.44 +0.2 2,517,478 - Psest_2363 0.45 +0.2 2,517,588 + Psest_2363 0.58 +0.2 2,517,588 + Psest_2363 0.58 +0.8 2,517,588 + Psest_2363 0.58 +2.2 2,517,589 - Psest_2363 0.58 +2.8 2,517,656 - Psest_2363 0.67 +1.2 2,517,656 - Psest_2363 0.67 +1.7 2,517,796 - Psest_2363 0.84 -0.3 2,517,905 + +0.7 2,518,289 + Psest_2364 0.42 +0.7 2,518,289 + Psest_2364 0.42 +1.2 2,518,290 - Psest_2364 0.42 -1.3 2,518,290 - Psest_2364 0.42 +2.2 2,518,349 + Psest_2364 0.48 -2.3 2,518,350 - Psest_2364 0.49 +0.2 2,518,350 - Psest_2364 0.49 +0.5 2,518,350 - Psest_2364 0.49 -1.3 2,518,616 + Psest_2364 0.79 +1.2 2,518,617 - Psest_2364 0.79 +0.2 2,518,685 + Psest_2364 0.87 +0.2 2,518,685 + Psest_2364 0.87 +1.2 2,518,685 + Psest_2364 0.87 +0.1 2,518,685 + Psest_2364 0.87 +0.2 2,518,685 + Psest_2364 0.87 -1.0 2,518,685 + Psest_2364 0.87 -0.8 2,518,686 - Psest_2364 0.87 -1.3 2,518,686 - Psest_2364 0.87 -0.6 2,518,686 - Psest_2364 0.87 +1.2
Or see this region's nucleotide sequence