Experiment: Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0222 and Psest_0223 are separated by 146 nucleotides Psest_0223 and Psest_0224 are separated by 123 nucleotides Psest_0224 and Psest_0225 are separated by 87 nucleotides
Psest_0222: Psest_0222 - phosphate ABC transporter, ATP-binding protein, at 230,844 to 231,671
_0222
Psest_0223: Psest_0223 - phosphate transport system regulatory protein PhoU, at 231,818 to 232,546
_0223
Psest_0224: Psest_0224 - Transcriptional regulator, at 232,670 to 233,584
_0224
Psest_0225: Psest_0225 - Predicted permease, DMT superfamily, at 233,672 to 234,583
_0225
Position (kb) 232
233
234 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 231.749 kb on + strand at 232.524 kb on + strand at 232.524 kb on + strand at 232.524 kb on + strand at 232.524 kb on + strand at 232.524 kb on + strand at 232.524 kb on + strand at 232.524 kb on + strand at 232.525 kb on - strand at 232.525 kb on - strand at 232.525 kb on - strand at 232.612 kb on + strand at 232.634 kb on + strand at 232.634 kb on + strand at 232.635 kb on - strand at 232.698 kb on + strand at 232.698 kb on + strand at 232.699 kb on - strand at 232.770 kb on + strand, within Psest_0224 at 232.770 kb on + strand, within Psest_0224 at 232.770 kb on + strand, within Psest_0224 at 232.771 kb on - strand, within Psest_0224 at 232.771 kb on - strand, within Psest_0224 at 232.771 kb on - strand, within Psest_0224 at 232.782 kb on + strand, within Psest_0224 at 232.783 kb on - strand, within Psest_0224 at 232.914 kb on + strand, within Psest_0224 at 232.914 kb on + strand, within Psest_0224 at 232.915 kb on - strand, within Psest_0224 at 232.995 kb on + strand, within Psest_0224 at 232.995 kb on + strand, within Psest_0224 at 232.995 kb on + strand, within Psest_0224 at 233.005 kb on + strand, within Psest_0224 at 233.005 kb on + strand, within Psest_0224 at 233.005 kb on + strand, within Psest_0224 at 233.005 kb on + strand, within Psest_0224 at 233.005 kb on + strand, within Psest_0224 at 233.005 kb on + strand, within Psest_0224 at 233.005 kb on + strand, within Psest_0224 at 233.006 kb on - strand, within Psest_0224 at 233.006 kb on - strand, within Psest_0224 at 233.006 kb on - strand, within Psest_0224 at 233.055 kb on + strand, within Psest_0224 at 233.262 kb on + strand, within Psest_0224 at 233.370 kb on + strand, within Psest_0224 at 233.370 kb on + strand, within Psest_0224 at 233.370 kb on + strand, within Psest_0224 at 233.371 kb on - strand, within Psest_0224 at 233.371 kb on - strand, within Psest_0224 at 233.550 kb on + strand at 233.550 kb on + strand at 233.551 kb on - strand at 233.551 kb on - strand at 233.551 kb on - strand at 233.680 kb on + strand at 233.680 kb on + strand at 233.680 kb on + strand at 233.681 kb on - strand at 233.681 kb on - strand at 233.681 kb on - strand at 233.681 kb on - strand at 233.750 kb on + strand at 233.750 kb on + strand at 233.750 kb on + strand at 233.750 kb on + strand at 233.750 kb on + strand at 233.750 kb on + strand at 233.750 kb on + strand at 233.750 kb on + strand at 233.750 kb on + strand at 233.750 kb on + strand at 234.108 kb on + strand, within Psest_0225 at 234.108 kb on + strand, within Psest_0225 at 234.109 kb on - strand, within Psest_0225 at 234.109 kb on - strand, within Psest_0225 at 234.321 kb on - strand, within Psest_0225 at 234.582 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.002 mg/ml remove 231,749 + +1.9 232,524 + +0.7 232,524 + +0.7 232,524 + +2.5 232,524 + +1.4 232,524 + -0.1 232,524 + +0.3 232,524 + +0.4 232,525 - +0.1 232,525 - -1.1 232,525 - -0.1 232,612 + +0.6 232,634 + +0.9 232,634 + +0.9 232,635 - +0.1 232,698 + +0.9 232,698 + -0.1 232,699 - -0.1 232,770 + Psest_0224 0.11 +1.9 232,770 + Psest_0224 0.11 +1.9 232,770 + Psest_0224 0.11 +0.6 232,771 - Psest_0224 0.11 +1.4 232,771 - Psest_0224 0.11 +1.6 232,771 - Psest_0224 0.11 +0.9 232,782 + Psest_0224 0.12 -0.1 232,783 - Psest_0224 0.12 +1.1 232,914 + Psest_0224 0.27 +0.4 232,914 + Psest_0224 0.27 +2.8 232,915 - Psest_0224 0.27 +0.1 232,995 + Psest_0224 0.36 +0.9 232,995 + Psest_0224 0.36 +0.5 232,995 + Psest_0224 0.36 +1.9 233,005 + Psest_0224 0.37 +1.9 233,005 + Psest_0224 0.37 -0.1 233,005 + Psest_0224 0.37 -1.4 233,005 + Psest_0224 0.37 -0.1 233,005 + Psest_0224 0.37 +0.9 233,005 + Psest_0224 0.37 +0.4 233,005 + Psest_0224 0.37 +0.5 233,006 - Psest_0224 0.37 -0.5 233,006 - Psest_0224 0.37 -0.1 233,006 - Psest_0224 0.37 +0.7 233,055 + Psest_0224 0.42 +1.9 233,262 + Psest_0224 0.65 -0.5 233,370 + Psest_0224 0.77 +0.4 233,370 + Psest_0224 0.77 +0.5 233,370 + Psest_0224 0.77 +0.6 233,371 - Psest_0224 0.77 +0.5 233,371 - Psest_0224 0.77 +0.1 233,550 + +1.4 233,550 + +0.2 233,551 - +1.9 233,551 - +0.9 233,551 - +0.9 233,680 + +1.7 233,680 + +0.9 233,680 + +2.5 233,681 - +0.9 233,681 - +1.4 233,681 - +0.9 233,681 - +1.9 233,750 + +1.9 233,750 + +0.9 233,750 + -0.1 233,750 + -2.1 233,750 + -1.1 233,750 + -0.1 233,750 + -0.1 233,750 + +0.1 233,750 + -0.6 233,750 + +1.9 234,108 + Psest_0225 0.48 +1.9 234,108 + Psest_0225 0.48 +0.8 234,109 - Psest_0225 0.48 -0.6 234,109 - Psest_0225 0.48 -0.6 234,321 - Psest_0225 0.71 -1.1 234,582 - -0.1
Or see this region's nucleotide sequence