Strain Fitness in Shewanella amazonensis SB2B around Sama_3563

Experiment: Chloride 700 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloride 700 mM
4,197,105	+		Sama_3561	0.85	-0.9
4,197,105	+		Sama_3561	0.85	+0.6
4,197,105	+		Sama_3561	0.85	-0.4
4,197,105	+		Sama_3561	0.85	+0.2
4,197,105	+		Sama_3561	0.85	-0.7
4,197,106	-		Sama_3561	0.85	+0.3
4,197,106	-		Sama_3561	0.85	+0.9
4,197,106	-		Sama_3561	0.85	+1.3
4,197,106	-		Sama_3561	0.85	+0.3
4,197,106	-		Sama_3561	0.85	-0.4
4,197,113	+		Sama_3561	0.86	-0.5
4,197,113	+		Sama_3561	0.86	-2.5
4,197,113	+		Sama_3561	0.86	-1.4
4,197,113	+		Sama_3561	0.86	+0.0
4,197,114	-		Sama_3561	0.86	+0.3
4,197,147	+		Sama_3561	0.89	-0.7
4,197,147	+		Sama_3561	0.89	-1.1
4,197,216	+				-0.4
4,197,217	-				-1.4
4,197,221	+				+0.2
4,197,221	+				-2.1
4,197,221	+				-1.0
4,197,221	+				-0.4
4,197,221	+				+0.0
4,197,227	+				+0.5
4,197,227	+				+0.1
4,197,227	+				+0.0
4,197,227	+				-1.2
4,197,228	-				-0.3
4,197,228	-				-1.5
4,197,228	-				+1.7
4,197,228	-				+0.5
4,197,228	-				-0.8
4,197,231	+				-1.1
4,197,232	-				+1.3
4,197,232	-				+0.3
4,197,232	-				-0.7
4,197,232	-				-0.3
4,197,245	-				+0.6
4,197,245	-				+0.5
4,197,256	+				+1.3
4,197,256	+				-0.1
4,197,256	+				-0.2
4,197,256	+				+0.5
4,197,256	+				+0.3
4,197,256	+				-0.2
4,197,257	-				+0.4
4,197,257	-				-0.2
4,197,257	-				-0.1
4,197,257	-				-0.6
4,197,257	-				-0.6
4,197,257	-				-0.7
4,197,292	+				+0.5
4,197,293	-				-1.1
4,197,293	-				+0.0
4,197,293	-				-0.2
4,197,300	-				+0.1
4,197,329	+		Sama_3562	0.10	+1.9
4,197,330	-		Sama_3562	0.11	-0.2
4,197,330	-		Sama_3562	0.11	-1.2
4,197,406	+		Sama_3562	0.22	+0.4
4,197,406	+		Sama_3562	0.22	-1.1
4,197,406	+		Sama_3562	0.22	+0.3
4,197,406	+		Sama_3562	0.22	+0.4
4,197,406	+		Sama_3562	0.22	-0.1
4,197,406	+		Sama_3562	0.22	+0.9
4,197,406	+		Sama_3562	0.22	+0.3
4,197,407	-		Sama_3562	0.22	-0.8
4,197,407	-		Sama_3562	0.22	-0.6
4,197,407	-		Sama_3562	0.22	+0.9
4,197,407	-		Sama_3562	0.22	+0.1
4,197,407	-		Sama_3562	0.22	-1.5
4,197,407	-		Sama_3562	0.22	+0.2
4,197,407	-		Sama_3562	0.22	-2.4
4,197,407	-		Sama_3562	0.22	+0.5
4,197,407	-		Sama_3562	0.22	+1.5
4,197,407	-		Sama_3562	0.22	+0.6
4,197,407	-		Sama_3562	0.22	-0.1
4,197,408	+		Sama_3562	0.22	-0.6
4,197,408	+		Sama_3562	0.22	-1.4
4,197,408	+		Sama_3562	0.22	+0.0
4,197,408	+		Sama_3562	0.22	-0.1
4,197,408	+		Sama_3562	0.22	-0.7
4,197,408	+		Sama_3562	0.22	-0.2
4,197,408	+		Sama_3562	0.22	+1.0
4,197,409	-		Sama_3562	0.22	-0.9
4,197,409	-		Sama_3562	0.22	-0.3
4,197,409	-		Sama_3562	0.22	+1.3
4,197,409	-		Sama_3562	0.22	-0.0
4,197,409	-		Sama_3562	0.22	-0.7
4,197,409	-		Sama_3562	0.22	-0.3
4,197,409	-		Sama_3562	0.22	+1.1
4,197,409	-		Sama_3562	0.22	+1.1
4,197,409	-		Sama_3562	0.22	-0.8
4,197,409	-		Sama_3562	0.22	-0.5
4,197,409	-		Sama_3562	0.22	-0.1
4,197,414	+		Sama_3562	0.23	+0.3
4,197,414	+		Sama_3562	0.23	+0.1
4,197,414	+		Sama_3562	0.23	-1.3
4,197,414	+		Sama_3562	0.23	+0.0
4,197,414	+		Sama_3562	0.23	-0.5
4,197,414	+		Sama_3562	0.23	-0.3
4,197,414	+		Sama_3562	0.23	+0.3
4,197,415	-		Sama_3562	0.23	+0.4
4,197,415	-		Sama_3562	0.23	+0.0
4,197,415	-		Sama_3562	0.23	-1.0
4,197,415	-		Sama_3562	0.23	+1.6
4,197,415	-		Sama_3562	0.23	+0.3
4,197,415	-		Sama_3562	0.23	-1.1
4,197,415	-		Sama_3562	0.23	+1.4
4,197,415	-		Sama_3562	0.23	-0.1
4,197,471	+		Sama_3562	0.31	+0.4
4,197,471	+		Sama_3562	0.31	-0.2
4,197,471	+		Sama_3562	0.31	+1.7
4,197,472	-		Sama_3562	0.31	-0.8
4,197,472	-		Sama_3562	0.31	+0.7
4,197,495	+		Sama_3562	0.35	-0.6
4,197,496	-		Sama_3562	0.35	+0.1
4,197,496	-		Sama_3562	0.35	-0.9
4,197,496	-		Sama_3562	0.35	-1.4
4,197,521	+		Sama_3562	0.39	-0.0
4,197,521	+		Sama_3562	0.39	+0.2
4,197,521	+		Sama_3562	0.39	+1.1
4,197,521	+		Sama_3562	0.39	+1.9
4,197,522	-		Sama_3562	0.39	-0.4
4,197,568	+		Sama_3562	0.46	+0.5
4,197,569	-		Sama_3562	0.46	-1.4
4,197,585	+		Sama_3562	0.48	-1.6
4,197,585	+		Sama_3562	0.48	-0.1
4,197,585	+		Sama_3562	0.48	+0.1
4,197,608	-		Sama_3562	0.51	+0.7
4,197,608	-		Sama_3562	0.51	+0.5
4,197,639	-		Sama_3562	0.56	-0.4
4,197,719	+		Sama_3562	0.68	+0.8
4,197,719	+		Sama_3562	0.68	-0.0
4,197,720	-		Sama_3562	0.68	+0.2
4,197,720	-		Sama_3562	0.68	+0.8
4,197,743	+		Sama_3562	0.71	+0.0
4,197,743	+		Sama_3562	0.71	-0.6
4,197,743	+		Sama_3562	0.71	-0.1
4,197,743	+		Sama_3562	0.71	-0.6
4,197,743	+		Sama_3562	0.71	-0.1
4,197,743	+		Sama_3562	0.71	-0.5
4,197,744	-		Sama_3562	0.71	-1.3
4,197,763	-		Sama_3562	0.74	-0.0
4,197,799	+		Sama_3562	0.79	-2.4
4,197,799	+		Sama_3562	0.79	-1.7
4,197,799	+		Sama_3562	0.79	+0.5
4,197,800	-		Sama_3562	0.80	+2.0
4,197,800	-		Sama_3562	0.80	+0.5
4,197,819	+		Sama_3562	0.82	+0.8
4,197,819	+		Sama_3562	0.82	-1.2
4,197,820	-		Sama_3562	0.83	-0.0
4,197,820	-		Sama_3562	0.83	-0.8
4,197,821	+		Sama_3562	0.83	+0.2
4,197,822	-		Sama_3562	0.83	+0.3
4,197,834	-		Sama_3562	0.85	-0.5
4,197,849	+		Sama_3562	0.87	-0.1
4,197,849	+		Sama_3562	0.87	+0.9
4,197,849	+		Sama_3562	0.87	+0.6
4,197,849	+		Sama_3562	0.87	-0.4
4,197,850	-		Sama_3562	0.87	+0.4
4,197,850	-		Sama_3562	0.87	+1.4
4,197,857	+		Sama_3562	0.88	-0.4
4,197,886	-				-0.6
4,197,889	+				-0.2
4,197,889	+				+0.6
4,197,889	+				-0.6
4,197,889	+				-0.7
4,197,889	+				+1.7
4,197,889	+				-0.8
4,197,889	+				+0.9
4,197,890	-				+1.1
4,197,890	-				-0.1
4,197,890	-				-0.4
4,197,890	-				+0.2
4,197,890	-				-0.1
4,197,890	-				+0.9
4,197,890	-				-0.1
4,197,890	-				-1.1
4,197,890	-				-0.3
4,197,890	-				+0.8
4,197,890	-				+0.3
4,197,890	-				+0.3
4,197,890	-				-0.1
4,197,890	-				-0.2
4,197,890	-				-2.1
4,197,890	-				+0.7
4,197,890	-				-1.1
4,197,890	-				-2.7
4,197,890	-				-0.3
4,197,902	+				+1.9
4,197,902	+				+0.5
4,197,902	+				+0.7
4,197,902	+				-1.1
4,197,902	+				+0.4
4,197,903	-				-0.2
4,197,903	-				-1.4
4,197,903	-				-1.9
4,197,903	-				+0.1
4,197,919	-				-0.5
4,197,972	+				+0.3
4,197,972	+				+0.6
4,197,972	+				+0.6
4,197,972	+				+0.1
4,197,973	-				-1.3
4,197,973	-				+0.3
4,197,973	-				-0.1
4,198,012	+				+0.9
4,198,012	+				+0.0
4,198,012	+				-0.1
4,198,067	+				-0.3
4,198,078	+				+2.4
4,198,078	+				+0.2
4,198,079	-				-1.7
4,198,079	-				-0.3
4,198,079	-				-0.4
4,198,111	+				+0.0
4,198,112	-				+0.0
4,198,112	-				+0.1
4,198,112	-				+0.2
4,198,131	+				+1.1
4,198,132	-				+0.5
4,198,158	-		Sama_3563	0.13	+1.5
4,198,290	+		Sama_3563	0.28	+0.9
4,198,290	+		Sama_3563	0.28	+0.9
4,198,291	-		Sama_3563	0.29	-0.1
4,198,291	-		Sama_3563	0.29	+0.7
4,198,312	+		Sama_3563	0.31	-0.9
4,198,312	+		Sama_3563	0.31	+1.4
4,198,312	+		Sama_3563	0.31	+0.7
4,198,312	+		Sama_3563	0.31	-0.3
4,198,312	+		Sama_3563	0.31	+0.7
4,198,312	+		Sama_3563	0.31	+0.7
4,198,312	+		Sama_3563	0.31	+1.4
4,198,312	+		Sama_3563	0.31	+0.9
4,198,312	+		Sama_3563	0.31	-0.7
4,198,313	-		Sama_3563	0.31	+0.9
4,198,313	-		Sama_3563	0.31	-0.3
4,198,313	-		Sama_3563	0.31	-2.4
4,198,313	-		Sama_3563	0.31	-1.1
4,198,313	-		Sama_3563	0.31	+0.5
4,198,313	-		Sama_3563	0.31	-1.7
4,198,313	-		Sama_3563	0.31	+1.0
4,198,313	-		Sama_3563	0.31	-0.0
4,198,313	-		Sama_3563	0.31	+0.6
4,198,313	-		Sama_3563	0.31	-0.0
4,198,313	-		Sama_3563	0.31	+1.1
4,198,313	-		Sama_3563	0.31	-1.6
4,198,313	-		Sama_3563	0.31	+0.5
4,198,313	-		Sama_3563	0.31	+0.7
4,198,313	-		Sama_3563	0.31	+1.9
4,198,313	-		Sama_3563	0.31	+2.3
4,198,313	-		Sama_3563	0.31	+0.8
4,198,315	-		Sama_3563	0.31	+0.5
4,198,315	-		Sama_3563	0.31	+0.3
4,198,369	+		Sama_3563	0.38	-0.1
4,198,370	-		Sama_3563	0.38	+1.3
4,198,398	+		Sama_3563	0.41	+0.4
4,198,399	-		Sama_3563	0.41	+0.0
4,198,466	+		Sama_3563	0.49	+0.9
4,198,466	+		Sama_3563	0.49	+0.5
4,198,466	+		Sama_3563	0.49	+0.7
4,198,467	-		Sama_3563	0.49	+1.3
4,198,467	-		Sama_3563	0.49	+0.7
4,198,476	+		Sama_3563	0.50	-0.4
4,198,477	-		Sama_3563	0.50	+0.5
4,198,491	+		Sama_3563	0.52	+0.5
4,198,498	+		Sama_3563	0.53	+0.0
4,198,498	+		Sama_3563	0.53	-0.6
4,198,498	+		Sama_3563	0.53	+0.9
4,198,498	+		Sama_3563	0.53	+0.1
4,198,499	-		Sama_3563	0.53	+0.1
4,198,499	-		Sama_3563	0.53	+0.3
4,198,499	-		Sama_3563	0.53	+0.3
4,198,547	+		Sama_3563	0.58	-1.6
4,198,547	+		Sama_3563	0.58	-0.4
4,198,547	+		Sama_3563	0.58	-0.5
4,198,547	+		Sama_3563	0.58	-0.0
4,198,548	-		Sama_3563	0.59	+0.9
4,198,548	-		Sama_3563	0.59	+0.7
4,198,572	-		Sama_3563	0.61	-2.6
4,198,572	-		Sama_3563	0.61	-0.6
4,198,619	+		Sama_3563	0.67	-0.4
4,198,660	+		Sama_3563	0.72	+1.4
4,198,660	+		Sama_3563	0.72	+0.7
4,198,661	-		Sama_3563	0.72	+0.4
4,198,661	-		Sama_3563	0.72	+1.1
4,198,661	-		Sama_3563	0.72	+0.9
4,198,661	-		Sama_3563	0.72	+0.9
4,198,661	-		Sama_3563	0.72	+1.5
4,198,709	+		Sama_3563	0.77	-0.4
4,198,710	-		Sama_3563	0.78	+0.4
4,198,720	+		Sama_3563	0.79	-0.7
4,198,720	+		Sama_3563	0.79	-0.2
4,198,757	+		Sama_3563	0.83	+1.7
4,198,757	+		Sama_3563	0.83	+0.7
4,198,757	+		Sama_3563	0.83	-1.0
4,198,758	-		Sama_3563	0.83	-0.6
4,198,758	-		Sama_3563	0.83	+0.9
4,198,759	+		Sama_3563	0.83	+0.4
4,198,760	-		Sama_3563	0.83	+0.8
4,198,785	+		Sama_3563	0.86	+0.3
4,198,785	+		Sama_3563	0.86	-1.1
4,198,785	+		Sama_3563	0.86	+0.5
4,198,785	+		Sama_3563	0.86	+0.2
4,198,785	+		Sama_3563	0.86	-1.2
4,198,786	-		Sama_3563	0.86	-1.4
4,198,786	-		Sama_3563	0.86	+1.0
4,198,786	-		Sama_3563	0.86	-1.0
4,198,786	-		Sama_3563	0.86	-0.0
4,198,786	-		Sama_3563	0.86	+0.1
4,198,789	+		Sama_3563	0.87	+1.8
4,198,789	+		Sama_3563	0.87	-1.4
4,198,789	+		Sama_3563	0.87	+0.3
4,198,789	+		Sama_3563	0.87	-1.7
4,198,790	-		Sama_3563	0.87	-0.5
4,198,790	-		Sama_3563	0.87	-0.2
4,198,790	-		Sama_3563	0.87	+1.3
4,198,790	-		Sama_3563	0.87	-0.3
4,198,802	+		Sama_3563	0.88	+0.6
4,198,802	+		Sama_3563	0.88	-0.1
4,198,826	+				+0.4
4,198,851	+				+0.0
4,198,851	+				-1.3
4,198,851	+				-2.6
4,198,852	-				+0.5
4,198,852	-				+0.0
4,198,852	-				+0.8
4,198,864	+				+1.3
4,198,864	+				+0.2
4,198,864	+				-0.2
4,198,864	+				+0.2
4,198,864	+				-0.7
4,198,864	+				-0.3
4,198,864	+				+0.7
4,198,864	+				+0.1
4,198,865	-				-1.3
4,198,865	-				-0.2
4,198,891	+				+1.6
4,198,892	-				+1.2
4,198,901	+				-1.0
4,198,901	+				+0.2
4,198,902	-				+0.6
4,198,902	-				+1.0
4,198,920	+				+1.4
4,198,921	-				-1.9
4,198,921	-				-1.1
4,198,921	-				-0.1
4,198,921	-				-0.2
4,198,944	+				+0.6
4,198,944	+				+0.2
4,198,944	+				-0.9
4,198,944	+				-1.3
4,198,944	+				+0.3
4,198,944	+				+0.3
4,198,944	+				+1.1
4,198,944	+				-1.9
4,198,945	-				+1.2
4,198,945	-				-0.9
4,198,945	-				+0.9
4,198,945	-				+0.1
4,198,945	-				-0.5
4,198,945	-				+0.2
4,198,945	-				-0.7
4,198,946	+				+0.9
4,198,946	+				-1.9
4,198,946	+				-0.3
4,198,946	+				+0.5
4,198,946	+				-1.1
4,198,946	+				-1.1
4,198,947	-				-2.7
4,198,947	-				+0.1
4,198,947	-				-0.2
4,198,947	-				-1.4
4,198,947	-				-1.4
4,198,947	-				-1.2
4,198,967	+				+0.7
4,198,967	+				+0.4
4,198,967	+				-0.0
4,198,967	+				+0.8
4,199,000	+				-1.3
4,199,000	+				-0.2
4,199,002	+				+1.7
4,199,002	+				-0.3
4,199,002	+				+1.0
4,199,002	+				+0.0
4,199,002	+				+3.0
4,199,003	-				-1.9
4,199,003	-				+1.9
4,199,020	+				-0.3
4,199,020	+				-0.7
4,199,021	-				-0.7
4,199,021	-				+0.0
4,199,101	+				-0.7
4,199,101	+				+0.7
4,199,102	-				+0.9
4,199,102	-				-1.1
4,199,102	-				-1.7
4,199,102	-				-1.7
4,199,148	+		Sama_3564	0.15	-1.9
4,199,148	+		Sama_3564	0.15	-1.1
4,199,148	+		Sama_3564	0.15	-1.9
4,199,148	+		Sama_3564	0.15	-2.0
4,199,149	-		Sama_3564	0.15	-2.8
4,199,149	-		Sama_3564	0.15	-0.9
4,199,149	-		Sama_3564	0.15	-1.1
4,199,149	-		Sama_3564	0.15	-0.9
4,199,149	-		Sama_3564	0.15	-1.8
4,199,192	-		Sama_3564	0.21	+1.9
4,199,217	+		Sama_3564	0.24	-0.1
4,199,279	-		Sama_3564	0.33	-1.7
4,199,400	+		Sama_3564	0.49	+0.2
4,199,400	+		Sama_3564	0.49	-1.0
4,199,426	+		Sama_3564	0.52	-1.1
4,199,426	+		Sama_3564	0.52	+1.6
4,199,427	-		Sama_3564	0.52	+0.5
4,199,464	+		Sama_3564	0.57	-1.7
4,199,464	+		Sama_3564	0.57	-1.6
4,199,475	+		Sama_3564	0.59	+0.5
4,199,476	-		Sama_3564	0.59	+0.4
4,199,531	+		Sama_3564	0.66	-0.7
4,199,532	-		Sama_3564	0.66	-2.9
4,199,532	-		Sama_3564	0.66	+0.2
4,199,546	+		Sama_3564	0.68	-0.1
4,199,547	-		Sama_3564	0.68	-2.4
4,199,547	-		Sama_3564	0.68	+1.3
4,199,547	-		Sama_3564	0.68	-2.1
4,199,677	-		Sama_3564	0.86	-0.5
4,199,691	-		Sama_3564	0.88	-0.1
4,199,691	-		Sama_3564	0.88	-2.0
4,199,691	-		Sama_3564	0.88	-0.7
4,199,759	+				-0.6
4,199,759	+				-0.2
4,199,760	-				-1.7
4,199,760	-				-0.2
4,199,760	-				-1.3
4,199,760	-				-0.7
4,199,760	-				-1.4
4,199,760	-				-0.4
4,199,789	+				+1.1
4,199,789	+				+0.9
4,199,789	+				-0.5
4,199,789	+				-0.1
4,199,790	-				+0.1
4,199,790	-				+0.8
4,199,790	-				-0.1
4,199,793	+				-0.4
4,199,793	+				+2.3
4,199,793	+				-0.5
4,199,794	-				-0.1
4,199,794	-				-0.2
4,199,794	-				-0.8
4,199,794	-				+0.1
4,199,794	-				-0.0
4,199,794	-				+0.4
4,199,794	-				-1.1
4,199,805	+				+1.1
4,199,806	-				+0.9
4,199,827	+				+0.9
4,199,827	+				+1.2
4,199,827	+				-0.2
4,199,827	+				+0.8
4,199,828	-				-1.1
4,199,842	+				-0.1
4,199,842	+				+2.1
4,199,843	-				+0.7
4,199,843	-				-1.1
4,199,843	-				-0.0
4,199,847	+				+0.9
4,199,857	+				+1.3
4,199,857	+				-0.6
4,199,858	-				-0.2
4,199,858	-				+0.6
4,199,858	-				-0.3
4,199,864	+				+0.1
4,199,864	+				+0.1
4,199,864	+				+0.4
4,199,865	-				+0.9
4,199,865	-				-0.1
4,199,865	-				-1.9
4,199,865	-				+0.8
4,199,879	+		Sama_3565	0.10	-0.9
4,199,879	+		Sama_3565	0.10	+0.3
4,199,880	-		Sama_3565	0.11	+0.4
4,199,880	-		Sama_3565	0.11	-0.1
4,199,880	-		Sama_3565	0.11	-0.2
4,199,880	-		Sama_3565	0.11	+0.3