Strain Fitness in Shewanella amazonensis SB2B around Sama_3256

Experiment: Chloride 700 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloride 700 mM
3,849,755	+				+0.1
3,850,469	+				-1.6
3,850,469	+				-2.6
3,850,469	+				-0.1
3,850,489	+				+0.6
3,850,490	-				-0.8
3,850,490	-				-1.3
3,850,490	-				-0.9
3,850,490	-				-1.3
3,850,506	-				-0.9
3,850,530	+				-0.2
3,850,530	+				+0.0
3,850,530	+				+0.1
3,850,531	-				-0.0
3,850,531	-				-1.3
3,850,531	-				-1.9
3,850,531	-				-1.6
3,850,531	-				-2.1
3,850,590	+				-1.4
3,850,590	+				-2.4
3,850,591	-				-1.8
3,850,591	-				-2.3
3,850,620	+				-2.4
3,850,620	+				-2.6
3,850,620	+				-2.0
3,850,621	-				-1.3
3,850,621	-				-3.3
3,850,621	-				-1.0
3,850,621	-				-1.4
3,850,621	-				-2.6
3,850,621	-				-2.7
3,850,621	-				-2.4
3,850,628	+				-1.3
3,850,628	+				-1.6
3,850,628	+				+0.7
3,850,628	+				-1.7
3,850,628	+				-1.2
3,850,628	+				-2.0
3,850,628	+				-0.5
3,850,629	-				-1.2
3,850,629	-				-3.0
3,850,629	-				-1.9
3,850,670	+		Sama_3256	0.10	-2.0
3,850,670	+		Sama_3256	0.10	-1.0
3,850,670	+		Sama_3256	0.10	-1.1
3,850,671	-		Sama_3256	0.10	-2.3
3,850,671	-		Sama_3256	0.10	-1.0
3,850,671	-		Sama_3256	0.10	-1.1
3,850,682	+		Sama_3256	0.11	-2.4
3,850,682	+		Sama_3256	0.11	-1.4
3,850,683	-		Sama_3256	0.11	-2.8
3,850,698	+		Sama_3256	0.13	-0.8
3,850,698	+		Sama_3256	0.13	-2.4
3,850,699	-		Sama_3256	0.13	-2.6
3,850,726	+		Sama_3256	0.15	-1.7
3,850,727	-		Sama_3256	0.15	-1.9
3,850,729	+		Sama_3256	0.15	-0.9
3,850,729	+		Sama_3256	0.15	-1.6
3,850,729	+		Sama_3256	0.15	-1.6
3,850,729	+		Sama_3256	0.15	-1.6
3,850,729	+		Sama_3256	0.15	-2.9
3,850,729	+		Sama_3256	0.15	-2.5
3,850,730	-		Sama_3256	0.15	+0.7
3,850,730	-		Sama_3256	0.15	-1.4
3,850,730	-		Sama_3256	0.15	-1.8
3,850,730	-		Sama_3256	0.15	-0.3
3,850,730	-		Sama_3256	0.15	-2.3
3,850,730	-		Sama_3256	0.15	-1.6
3,850,730	-		Sama_3256	0.15	-1.9
3,850,730	-		Sama_3256	0.15	-0.3
3,850,730	-		Sama_3256	0.15	-2.4
3,850,730	-		Sama_3256	0.15	-1.6
3,850,730	-		Sama_3256	0.15	+0.1
3,850,735	+		Sama_3256	0.16	-0.4
3,850,735	+		Sama_3256	0.16	-2.1
3,850,735	+		Sama_3256	0.16	-1.3
3,850,736	-		Sama_3256	0.16	-1.3
3,850,762	+		Sama_3256	0.18	-1.5
3,850,762	+		Sama_3256	0.18	-0.7
3,850,762	+		Sama_3256	0.18	-0.7
3,850,763	-		Sama_3256	0.18	-1.6
3,850,763	-		Sama_3256	0.18	-3.6
3,850,841	+		Sama_3256	0.25	-2.9
3,850,841	+		Sama_3256	0.25	+1.4
3,850,966	+		Sama_3256	0.35	-2.1
3,850,967	-		Sama_3256	0.35	-3.1
3,850,967	-		Sama_3256	0.35	-1.3
3,850,989	+		Sama_3256	0.37	-0.9
3,851,129	+		Sama_3256	0.49	-0.3
3,851,129	+		Sama_3256	0.49	-0.8
3,851,129	+		Sama_3256	0.49	-4.0
3,851,129	+		Sama_3256	0.49	-4.4
3,851,130	-		Sama_3256	0.49	+0.4
3,851,136	+		Sama_3256	0.49	-1.6
3,851,142	+		Sama_3256	0.50	-1.4
3,851,159	-		Sama_3256	0.51	-2.0
3,851,185	-		Sama_3256	0.53	-1.9
3,851,211	+		Sama_3256	0.56	-1.4
3,851,211	+		Sama_3256	0.56	-1.1
3,851,212	-		Sama_3256	0.56	+0.2
3,851,212	-		Sama_3256	0.56	-1.9
3,851,221	+		Sama_3256	0.56	-0.4
3,851,221	+		Sama_3256	0.56	-1.2
3,851,221	+		Sama_3256	0.56	-0.9
3,851,221	+		Sama_3256	0.56	-1.7
3,851,221	+		Sama_3256	0.56	-1.7
3,851,222	-		Sama_3256	0.57	-0.9
3,851,222	-		Sama_3256	0.57	+0.1
3,851,222	-		Sama_3256	0.57	-3.5
3,851,222	-		Sama_3256	0.57	-2.0
3,851,222	-		Sama_3256	0.57	-3.4
3,851,222	-		Sama_3256	0.57	-2.5
3,851,222	-		Sama_3256	0.57	-1.4
3,851,304	+		Sama_3256	0.63	-0.6
3,851,304	+		Sama_3256	0.63	-0.9
3,851,304	+		Sama_3256	0.63	-0.7
3,851,304	+		Sama_3256	0.63	+0.7
3,851,305	-		Sama_3256	0.63	-1.9
3,851,305	-		Sama_3256	0.63	-1.4
3,851,305	-		Sama_3256	0.63	-2.2
3,851,321	+		Sama_3256	0.65	-1.9
3,851,321	+		Sama_3256	0.65	-1.0
3,851,321	+		Sama_3256	0.65	-2.3
3,851,374	+		Sama_3256	0.69	-0.3
3,851,374	+		Sama_3256	0.69	-1.4
3,851,374	+		Sama_3256	0.69	-1.6
3,851,374	+		Sama_3256	0.69	-0.1
3,851,374	+		Sama_3256	0.69	-0.1
3,851,375	-		Sama_3256	0.69	-3.3
3,851,425	+		Sama_3256	0.74	-0.6
3,851,426	-		Sama_3256	0.74	+0.3
3,851,427	+		Sama_3256	0.74	-1.6
3,851,427	+		Sama_3256	0.74	-1.9
3,851,428	-		Sama_3256	0.74	-0.9
3,851,428	-		Sama_3256	0.74	-0.6
3,851,428	-		Sama_3256	0.74	-2.1
3,851,463	-		Sama_3256	0.77	-1.9
3,851,488	+		Sama_3256	0.79	-0.4
3,851,488	+		Sama_3256	0.79	-2.7
3,851,522	+		Sama_3256	0.82	-1.9
3,851,522	+		Sama_3256	0.82	-1.8
3,851,522	+		Sama_3256	0.82	-0.1
3,851,523	-		Sama_3256	0.82	-1.6
3,851,556	+		Sama_3256	0.85	-2.9
3,851,577	+		Sama_3256	0.86	-2.1
3,851,595	+		Sama_3256	0.88	-1.9
3,851,595	+		Sama_3256	0.88	-1.6
3,851,596	-		Sama_3256	0.88	-1.3
3,851,596	-		Sama_3256	0.88	-1.1
3,851,740	+				-3.1
3,851,741	-				-1.1
3,851,754	+				-2.6
3,851,754	+				+0.4
3,851,754	+				-1.3
3,851,755	-				-2.7
3,851,755	-				-0.4
3,851,755	-				-1.2
3,851,766	-				-1.4
3,851,766	-				-1.3
3,851,793	+				-2.4
3,851,793	+				+1.1
3,851,820	+				-1.8
3,851,820	+				-3.4
3,851,820	+				-4.3
3,851,820	+				-2.1
3,851,820	+				-1.6
3,851,821	-				-0.6
3,851,821	-				-1.7
3,851,821	-				+0.1
3,851,821	-				-2.4
3,851,821	-				+0.5
3,852,053	+		Sama_3257	0.27	-0.0
3,852,053	+		Sama_3257	0.27	-0.1
3,852,136	-		Sama_3257	0.34	-0.7
3,852,153	+		Sama_3257	0.36	+0.3
3,852,153	+		Sama_3257	0.36	-0.8
3,852,154	-		Sama_3257	0.36	-1.1
3,852,154	-		Sama_3257	0.36	+0.7
3,852,154	-		Sama_3257	0.36	+0.4
3,852,170	-		Sama_3257	0.37	-1.7
3,852,196	+		Sama_3257	0.39	-2.2
3,852,197	-		Sama_3257	0.40	-2.4
3,852,200	+		Sama_3257	0.40	+0.2
3,852,200	+		Sama_3257	0.40	-0.9
3,852,201	-		Sama_3257	0.40	-0.3
3,852,201	-		Sama_3257	0.40	-0.3
3,852,201	-		Sama_3257	0.40	-1.7
3,852,216	+		Sama_3257	0.41	-0.1
3,852,225	-		Sama_3257	0.42	-0.2
3,852,321	+		Sama_3257	0.50	-0.6
3,852,321	+		Sama_3257	0.50	-1.6
3,852,322	-		Sama_3257	0.50	-0.7
3,852,361	+		Sama_3257	0.54	-2.7
3,852,361	+		Sama_3257	0.54	-1.1
3,852,362	-		Sama_3257	0.54	+0.1
3,852,362	-		Sama_3257	0.54	-2.8
3,852,389	+		Sama_3257	0.56	-0.7
3,852,389	+		Sama_3257	0.56	-1.7
3,852,390	-		Sama_3257	0.56	-0.7
3,852,412	+		Sama_3257	0.58	-2.3
3,852,412	+		Sama_3257	0.58	-0.4
3,852,412	+		Sama_3257	0.58	+0.1
3,852,412	+		Sama_3257	0.58	-1.0
3,852,413	-		Sama_3257	0.58	-1.0
3,852,413	-		Sama_3257	0.58	-1.8
3,852,413	-		Sama_3257	0.58	-1.5
3,852,425	-		Sama_3257	0.59	-1.4
3,852,535	-		Sama_3257	0.68	-0.6
3,852,560	+		Sama_3257	0.71	-0.9
3,852,560	+		Sama_3257	0.71	-3.0
3,852,560	+		Sama_3257	0.71	-0.3
3,852,561	-		Sama_3257	0.71	-1.3
3,852,561	-		Sama_3257	0.71	+0.6
3,852,590	+		Sama_3257	0.73	-0.1
3,852,590	+		Sama_3257	0.73	-0.7
3,852,590	+		Sama_3257	0.73	+0.1
3,852,590	+		Sama_3257	0.73	+0.1
3,852,591	-		Sama_3257	0.73	+0.1
3,852,647	-		Sama_3257	0.78	-2.7
3,852,647	-		Sama_3257	0.78	-2.6
3,852,717	+		Sama_3257	0.84	-0.3
3,852,717	+		Sama_3257	0.84	-0.9
3,852,717	+		Sama_3257	0.84	-0.1
3,852,718	-		Sama_3257	0.84	+0.2