Strain Fitness in Shewanella amazonensis SB2B around Sama_3211

Experiment: Chloride 700 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloride 700 mM
3,799,989	+		Sama_3210	0.48	-1.6
3,799,990	-		Sama_3210	0.48	+0.8
3,799,990	-		Sama_3210	0.48	+0.1
3,800,004	+		Sama_3210	0.48	+0.2
3,800,004	+		Sama_3210	0.48	-0.1
3,800,004	+		Sama_3210	0.48	+0.8
3,800,004	+		Sama_3210	0.48	+0.9
3,800,004	+		Sama_3210	0.48	-0.2
3,800,004	+		Sama_3210	0.48	+1.4
3,800,004	+		Sama_3210	0.48	+0.7
3,800,004	+		Sama_3210	0.48	+0.7
3,800,005	-		Sama_3210	0.48	-0.2
3,800,005	-		Sama_3210	0.48	+0.4
3,800,005	-		Sama_3210	0.48	+1.1
3,800,005	-		Sama_3210	0.48	-0.5
3,800,005	-		Sama_3210	0.48	+0.1
3,800,005	-		Sama_3210	0.48	+0.8
3,800,030	+		Sama_3210	0.50	-2.1
3,800,041	+		Sama_3210	0.50	+0.3
3,800,042	-		Sama_3210	0.50	+0.3
3,800,097	+		Sama_3210	0.53	+2.7
3,800,114	-		Sama_3210	0.54	+0.3
3,800,114	-		Sama_3210	0.54	+0.7
3,800,132	+		Sama_3210	0.55	+0.4
3,800,151	+		Sama_3210	0.56	+1.1
3,800,152	-		Sama_3210	0.56	+1.7
3,800,237	-		Sama_3210	0.61	-0.9
3,800,251	-		Sama_3210	0.61	-1.2
3,800,251	-		Sama_3210	0.61	+0.4
3,800,281	+		Sama_3210	0.63	+0.9
3,800,281	+		Sama_3210	0.63	+1.0
3,800,281	+		Sama_3210	0.63	-0.1
3,800,282	-		Sama_3210	0.63	-0.0
3,800,282	-		Sama_3210	0.63	+1.2
3,800,282	-		Sama_3210	0.63	-1.3
3,800,282	-		Sama_3210	0.63	+0.2
3,800,312	+		Sama_3210	0.65	-1.0
3,800,312	+		Sama_3210	0.65	+0.0
3,800,313	-		Sama_3210	0.65	+0.7
3,800,501	+		Sama_3210	0.75	+1.2
3,800,502	-		Sama_3210	0.75	+0.0
3,800,527	+		Sama_3210	0.76	-0.7
3,800,527	+		Sama_3210	0.76	-0.1
3,800,572	+		Sama_3210	0.79	+0.6
3,800,572	+		Sama_3210	0.79	-0.6
3,800,572	+		Sama_3210	0.79	+0.2
3,800,572	+		Sama_3210	0.79	-0.1
3,800,573	-		Sama_3210	0.79	-1.9
3,800,573	-		Sama_3210	0.79	-1.0
3,800,573	-		Sama_3210	0.79	-0.9
3,800,589	-		Sama_3210	0.80	-2.7
3,800,601	+		Sama_3210	0.80	+0.1
3,800,601	+		Sama_3210	0.80	+1.1
3,800,601	+		Sama_3210	0.80	+0.1
3,800,602	-		Sama_3210	0.80	+0.7
3,800,622	+		Sama_3210	0.81	-0.3
3,800,622	+		Sama_3210	0.81	-0.4
3,800,622	+		Sama_3210	0.81	+0.1
3,800,623	-		Sama_3210	0.81	-0.1
3,800,623	-		Sama_3210	0.81	+0.8
3,800,623	-		Sama_3210	0.81	+0.2
3,800,623	-		Sama_3210	0.81	+0.1
3,800,623	-		Sama_3210	0.81	+0.1
3,800,623	-		Sama_3210	0.81	-1.0
3,800,623	-		Sama_3210	0.81	+0.7
3,800,711	+		Sama_3210	0.86	+0.1
3,800,711	+		Sama_3210	0.86	-0.3
3,800,711	+		Sama_3210	0.86	-1.2
3,800,712	-		Sama_3210	0.86	-1.6
3,800,716	+		Sama_3210	0.86	+1.7
3,800,716	+		Sama_3210	0.86	+0.6
3,800,716	+		Sama_3210	0.86	+0.1
3,800,716	+		Sama_3210	0.86	+0.5
3,800,716	+		Sama_3210	0.86	-0.2
3,800,717	-		Sama_3210	0.86	+0.5
3,800,717	-		Sama_3210	0.86	+2.3
3,800,717	-		Sama_3210	0.86	+0.2
3,800,777	-		Sama_3210	0.90	-1.1
3,800,807	+				+0.0
3,800,846	+				-0.1
3,800,847	-				+1.7
3,800,847	-				+1.7
3,800,847	-				+3.2
3,800,849	+				-0.3
3,800,849	+				-0.1
3,800,849	+				-1.4
3,800,904	+				-1.6
3,800,904	+				+0.2
3,800,904	+				+1.1
3,800,953	+				+1.5
3,800,953	+				-3.0
3,800,953	+				-0.6
3,800,953	+				+1.5
3,800,954	-				+0.1
3,801,983	-				-2.5
3,801,995	+				+0.3
3,801,995	+				+0.4
3,801,995	+				+0.2
3,801,995	+				-2.1
3,801,995	+				-0.8
3,801,995	+				+0.6
3,801,996	-				-1.0
3,801,996	-				+1.3
3,801,996	-				+0.4
3,801,996	-				+2.8
3,801,996	-				+1.8
3,801,996	-				+0.3
3,801,998	+				-0.4
3,801,998	+				+1.2
3,802,098	+				+0.3
3,802,099	-				-0.5
3,802,115	-				-0.1
3,802,125	+				-0.1
3,802,125	+				-0.7
3,802,125	+				+0.3
3,802,133	+				+0.3
3,802,134	-				+0.7
3,802,134	-				+0.9
3,802,134	-				-0.4
3,802,134	-				-0.4
3,802,134	-				-0.7
3,802,134	-				+0.0
3,802,176	+				+1.1
3,802,176	+				-0.1
3,802,176	+				+0.1
3,802,176	+				-0.1
3,802,177	-				-0.2
3,802,190	+				-0.4
3,802,191	-				+0.5
3,802,257	+		Sama_3212	0.17	-0.3
3,802,258	-		Sama_3212	0.17	-2.1
3,802,284	+		Sama_3212	0.22	+2.5
3,802,285	-		Sama_3212	0.22	+0.3
3,802,349	+		Sama_3212	0.34	+2.1
3,802,369	+		Sama_3212	0.37	+1.0
3,802,369	+		Sama_3212	0.37	+0.5
3,802,371	+		Sama_3212	0.38	-1.3
3,802,371	+		Sama_3212	0.38	+0.2
3,802,372	-		Sama_3212	0.38	+0.0
3,802,378	+		Sama_3212	0.39	+0.7
3,802,379	-		Sama_3212	0.39	+0.3
3,802,407	+		Sama_3212	0.45	-0.7
3,802,407	+		Sama_3212	0.45	-0.0
3,802,409	+		Sama_3212	0.45	-1.9
3,802,409	+		Sama_3212	0.45	-0.2
3,802,409	+		Sama_3212	0.45	-1.0
3,802,410	-		Sama_3212	0.45	-1.1
3,802,410	-		Sama_3212	0.45	+0.6
3,802,436	+		Sama_3212	0.50	+0.7
3,802,436	+		Sama_3212	0.50	+0.7
3,802,437	-		Sama_3212	0.50	+0.7
3,802,437	-		Sama_3212	0.50	-0.0
3,802,437	-		Sama_3212	0.50	-0.2
3,802,437	-		Sama_3212	0.50	-0.2
3,802,491	+		Sama_3212	0.60	-0.3
3,802,497	+		Sama_3212	0.61	+2.3
3,802,497	+		Sama_3212	0.61	+0.1
3,802,500	+		Sama_3212	0.62	+0.7
3,802,501	-		Sama_3212	0.62	-1.5
3,802,501	-		Sama_3212	0.62	+0.0
3,802,501	-		Sama_3212	0.62	+1.1
3,802,524	+		Sama_3212	0.66	-1.1
3,802,537	+		Sama_3212	0.69	+0.7
3,802,537	+		Sama_3212	0.69	+1.2
3,802,537	+		Sama_3212	0.69	-2.3
3,802,537	+		Sama_3212	0.69	-0.7
3,802,537	+		Sama_3212	0.69	-0.5
3,802,537	+		Sama_3212	0.69	+0.2
3,802,537	+		Sama_3212	0.69	+0.6
3,802,537	+		Sama_3212	0.69	+1.0
3,802,537	+		Sama_3212	0.69	+0.1
3,802,537	+		Sama_3212	0.69	+0.7
3,802,537	+		Sama_3212	0.69	-1.0
3,802,537	+		Sama_3212	0.69	-0.4
3,802,538	-		Sama_3212	0.69	+0.4
3,802,538	-		Sama_3212	0.69	-0.0
3,802,538	-		Sama_3212	0.69	+0.4
3,802,538	-		Sama_3212	0.69	-1.0
3,802,538	-		Sama_3212	0.69	+0.0
3,802,547	+		Sama_3212	0.71	-0.3
3,802,547	+		Sama_3212	0.71	+0.2
3,802,547	+		Sama_3212	0.71	-0.7
3,802,548	-		Sama_3212	0.71	-0.9
3,802,548	-		Sama_3212	0.71	+2.3
3,802,588	+		Sama_3212	0.78	-0.0
3,802,588	+		Sama_3212	0.78	+0.1
3,802,589	-		Sama_3212	0.78	+0.2
3,802,602	+		Sama_3212	0.81	-0.9
3,802,602	+		Sama_3212	0.81	+0.9
3,802,602	+		Sama_3212	0.81	+0.3
3,802,702	+				+0.8
3,802,702	+				-2.1
3,802,702	+				+0.8
3,802,703	-				+0.1
3,802,703	-				+0.7
3,802,775	-				-0.9
3,802,786	+				-1.3
3,802,787	-				+0.8
3,802,787	-				+0.7
3,802,807	+				-0.3
3,802,807	+				-0.1
3,802,807	+				-0.2
3,802,808	-				+0.4
3,802,808	-				+0.5
3,802,808	-				+0.6
3,802,808	-				-0.0
3,802,808	-				+1.2
3,802,808	-				-1.3
3,802,840	+				-1.6
3,802,840	+				-2.4
3,802,840	+				-0.8
3,802,841	-				-1.2
3,802,933	+				+0.2
3,802,933	+				-1.9
3,802,933	+				-0.6
3,802,934	-				+0.6
3,802,934	-				+0.4
3,802,934	-				-1.4
3,802,934	-				-0.7
3,802,934	-				+0.1
3,802,934	-				-0.1
3,802,946	+				-0.3
3,802,947	-				-0.7
3,802,947	-				-1.4
3,802,953	+				-1.0
3,802,953	+				+0.5
3,802,954	-				-0.5
3,802,954	-				-0.2
3,802,954	-				-0.3
3,802,954	-				+0.5
3,802,954	-				-0.3
3,802,954	-				+0.9
3,802,976	+				-0.0
3,802,977	-				-0.4
3,802,979	+				+0.2
3,802,980	-				+0.2
3,802,980	-				+0.7
3,802,980	-				-1.0
3,802,980	-				-0.6
3,802,981	+				-1.3
3,802,981	+				+1.0
3,802,981	+				-0.4
3,802,981	+				+0.7
3,802,982	-				-2.0
3,802,982	-				+1.3
3,802,982	-				-1.3
3,802,982	-				-0.2
3,802,982	-				-1.0
3,802,982	-				+0.1
3,802,982	-				+0.5