Strain Fitness in Shewanella amazonensis SB2B around Sama_2540

Experiment: Chloride 700 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloride 700 mM
3,048,970	-				-1.5
3,049,045	-				+1.9
3,049,080	-				+1.0
3,049,155	-				-0.1
3,049,268	+				-0.1
3,049,268	+				-1.1
3,049,275	+				-0.4
3,049,277	+				-0.8
3,049,278	-				-1.2
3,049,282	-				-1.2
3,049,317	-				+0.6
3,049,317	-				-0.0
3,049,317	-				-0.8
3,049,354	+				-0.4
3,049,355	-				-0.9
3,049,355	-				-0.8
3,049,355	-				-2.3
3,049,388	+				+0.8
3,049,389	-				-0.0
3,049,389	-				-0.8
3,049,389	-				+0.6
3,049,459	+				-1.1
3,049,459	+				-0.5
3,049,459	+				+0.3
3,049,460	-				-0.7
3,049,474	-				-0.3
3,049,474	-				-0.5
3,049,659	+		Sama_2540	0.16	-0.5
3,049,714	+		Sama_2540	0.19	-2.3
3,049,715	-		Sama_2540	0.19	+0.2
3,049,730	+		Sama_2540	0.20	-1.8
3,049,730	+		Sama_2540	0.20	+0.5
3,049,731	-		Sama_2540	0.20	+1.2
3,049,731	-		Sama_2540	0.20	+1.0
3,049,731	-		Sama_2540	0.20	-0.7
3,049,731	-		Sama_2540	0.20	-0.8
3,049,732	-		Sama_2540	0.20	+0.5
3,049,808	+		Sama_2540	0.24	+0.9
3,049,809	-		Sama_2540	0.24	+0.5
3,049,844	-		Sama_2540	0.26	+0.2
3,049,857	-		Sama_2540	0.27	+0.1
3,049,857	-		Sama_2540	0.27	+0.0
3,049,857	-		Sama_2540	0.27	+0.5
3,049,857	-		Sama_2540	0.27	-1.1
3,049,857	-		Sama_2540	0.27	+2.5
3,049,857	-		Sama_2540	0.27	-0.1
3,049,862	-		Sama_2540	0.27	+1.1
3,049,862	-		Sama_2540	0.27	-1.3
3,049,875	+		Sama_2540	0.28	+0.3
3,050,008	+		Sama_2540	0.35	-0.1
3,050,008	+		Sama_2540	0.35	+0.9
3,050,008	+		Sama_2540	0.35	+3.5
3,050,008	+		Sama_2540	0.35	+0.9
3,050,008	+		Sama_2540	0.35	+0.5
3,050,009	-		Sama_2540	0.36	-0.1
3,050,009	-		Sama_2540	0.36	+0.9
3,050,009	-		Sama_2540	0.36	+1.0
3,050,009	-		Sama_2540	0.36	-0.1
3,050,011	+		Sama_2540	0.36	+1.1
3,050,011	+		Sama_2540	0.36	+0.7
3,050,012	-		Sama_2540	0.36	-1.3
3,050,012	-		Sama_2540	0.36	+0.1
3,050,012	-		Sama_2540	0.36	+0.8
3,050,043	+		Sama_2540	0.37	+0.8
3,050,043	+		Sama_2540	0.37	+0.5
3,050,044	-		Sama_2540	0.37	+0.4
3,050,086	+		Sama_2540	0.40	+0.2
3,050,213	+		Sama_2540	0.47	+1.3
3,050,213	+		Sama_2540	0.47	+1.0
3,050,213	+		Sama_2540	0.47	-0.1
3,050,213	+		Sama_2540	0.47	+0.5
3,050,213	+		Sama_2540	0.47	+1.0
3,050,214	-		Sama_2540	0.47	+0.6
3,050,217	+		Sama_2540	0.47	+0.7
3,050,217	+		Sama_2540	0.47	-0.4
3,050,218	-		Sama_2540	0.47	-0.8
3,050,218	-		Sama_2540	0.47	-0.3
3,050,238	+		Sama_2540	0.48	+1.6
3,050,256	-		Sama_2540	0.49	+0.4
3,050,256	-		Sama_2540	0.49	-0.2
3,050,301	+		Sama_2540	0.52	-2.1
3,050,301	+		Sama_2540	0.52	-3.4
3,050,302	-		Sama_2540	0.52	-2.8
3,050,302	-		Sama_2540	0.52	-1.5
3,050,302	-		Sama_2540	0.52	-0.4
3,050,302	-		Sama_2540	0.52	+1.4
3,050,302	-		Sama_2540	0.52	+0.3
3,050,305	+		Sama_2540	0.52	+0.7
3,050,305	+		Sama_2540	0.52	+0.7
3,050,305	+		Sama_2540	0.52	-0.3
3,050,305	+		Sama_2540	0.52	-2.7
3,050,306	-		Sama_2540	0.52	+1.0
3,050,306	-		Sama_2540	0.52	+0.3
3,050,420	+		Sama_2540	0.58	+0.1
3,050,421	-		Sama_2540	0.58	+0.7
3,050,421	-		Sama_2540	0.58	+0.2
3,050,538	+		Sama_2540	0.65	-0.5
3,050,617	+		Sama_2540	0.69	+1.0
3,050,617	+		Sama_2540	0.69	-0.3
3,050,684	-		Sama_2540	0.73	+0.6
3,050,761	-		Sama_2540	0.77	-0.2
3,050,764	+		Sama_2540	0.77	-0.1
3,050,764	+		Sama_2540	0.77	+2.0
3,050,765	-		Sama_2540	0.77	+0.4
3,050,765	-		Sama_2540	0.77	-0.0
3,050,793	+		Sama_2540	0.79	-0.1
3,050,793	+		Sama_2540	0.79	-0.2
3,050,794	-		Sama_2540	0.79	-0.2
3,050,821	+		Sama_2540	0.81	-1.1
3,050,822	-		Sama_2540	0.81	+0.9
3,050,822	-		Sama_2540	0.81	+0.5
3,050,910	+		Sama_2540	0.85	-1.1
3,050,910	+		Sama_2540	0.85	-0.1
3,050,910	+		Sama_2540	0.85	+1.9
3,050,911	-		Sama_2540	0.85	+0.1
3,051,028	-				+0.7
3,051,049	+				-0.3
3,051,070	+				+0.5
3,051,070	+				+0.2
3,051,097	+				-1.8
3,051,097	+				-0.7
3,051,097	+				-0.1
3,051,097	+				-1.5
3,051,098	-				-0.4
3,051,098	-				-0.2
3,051,121	+				+1.1
3,051,121	+				+0.1
3,051,121	+				-1.3
3,051,121	+				-0.5
3,051,122	-				-1.8
3,051,122	-				+0.3
3,051,127	+				+1.4
3,051,127	+				+0.6
3,051,127	+				+0.7
3,051,127	+				+0.8
3,051,127	+				+0.4
3,051,128	-				-0.1
3,051,140	+				-0.4
3,051,141	-				-0.1
3,051,149	+				-0.9
3,051,149	+				+0.5
3,051,150	-				-0.8
3,051,150	-				-1.1
3,051,150	-				-0.4
3,051,207	-				-1.5
3,051,238	+				-0.2
3,051,239	-				-1.4
3,051,277	+				-1.7
3,051,278	-				-0.1
3,051,322	+				-0.2
3,051,408	+		Sama_2541	0.23	+1.1
3,051,408	+		Sama_2541	0.23	-1.8
3,051,408	+		Sama_2541	0.23	+0.4
3,051,408	+		Sama_2541	0.23	+0.3
3,051,467	+		Sama_2541	0.35	+0.8
3,051,467	+		Sama_2541	0.35	-0.2
3,051,467	+		Sama_2541	0.35	+0.8
3,051,467	+		Sama_2541	0.35	+0.3
3,051,468	-		Sama_2541	0.35	-1.8
3,051,468	-		Sama_2541	0.35	+0.5
3,051,468	-		Sama_2541	0.35	-0.6
3,051,468	-		Sama_2541	0.35	-1.1
3,051,468	-		Sama_2541	0.35	-0.1
3,051,535	+		Sama_2541	0.48	+0.9
3,051,536	-		Sama_2541	0.48	-0.3
3,051,537	+		Sama_2541	0.48	+0.6
3,051,537	+		Sama_2541	0.48	-0.1
3,051,537	+		Sama_2541	0.48	+1.8
3,051,537	+		Sama_2541	0.48	-0.4
3,051,537	+		Sama_2541	0.48	-0.3
3,051,537	+		Sama_2541	0.48	-0.2
3,051,537	+		Sama_2541	0.48	-0.7
3,051,538	-		Sama_2541	0.49	+0.2
3,051,538	-		Sama_2541	0.49	+0.3
3,051,538	-		Sama_2541	0.49	+1.0
3,051,538	-		Sama_2541	0.49	+0.2
3,051,538	-		Sama_2541	0.49	-0.4
3,051,538	-		Sama_2541	0.49	-0.4
3,051,538	-		Sama_2541	0.49	+1.7
3,051,538	-		Sama_2541	0.49	+0.7
3,051,538	-		Sama_2541	0.49	+0.3
3,051,568	+		Sama_2541	0.55	+1.7
3,051,568	+		Sama_2541	0.55	-0.0
3,051,568	+		Sama_2541	0.55	-0.2
3,051,569	-		Sama_2541	0.55	+1.5
3,051,571	-		Sama_2541	0.55	+0.9
3,051,575	-		Sama_2541	0.56	+1.1
3,051,610	+		Sama_2541	0.63	+0.6
3,051,610	+		Sama_2541	0.63	-0.8
3,051,610	+		Sama_2541	0.63	-1.0
3,051,611	-		Sama_2541	0.63	+0.4
3,051,700	+		Sama_2541	0.80	-0.7
3,051,778	+				+1.8
3,051,791	+				+0.8
3,051,791	+				-1.0
3,051,858	+				+1.4
3,051,858	+				+0.1
3,051,858	+				+0.4
3,051,859	-				+0.2
3,051,859	-				+0.2
3,051,859	-				-0.2
3,051,859	-				+1.8
3,051,859	-				+0.9
3,051,859	-				-1.5
3,051,894	-				-0.1
3,051,903	+				+0.1
3,051,904	-				-0.9
3,051,927	+				-0.3
3,051,927	+				-0.7
3,051,927	+				-0.9
3,051,928	-				+1.5
3,051,928	-				+0.2
3,051,928	-				-0.5
3,051,928	-				+1.5
3,051,928	-				-0.9
3,051,928	-				+0.0
3,051,949	-				+0.4
3,051,949	-				-1.1
3,052,068	-		Sama_2542	0.17	+0.2
3,052,085	+		Sama_2542	0.18	-0.1
3,052,086	-		Sama_2542	0.18	+1.2
3,052,086	-		Sama_2542	0.18	+0.2
3,052,122	+		Sama_2542	0.22	-0.2
3,052,123	-		Sama_2542	0.22	+0.8
3,052,135	+		Sama_2542	0.23	+0.3
3,052,135	+		Sama_2542	0.23	+0.1
3,052,136	-		Sama_2542	0.23	-2.1
3,052,160	+		Sama_2542	0.25	+0.1
3,052,161	-		Sama_2542	0.25	+0.2