Experiment: m.b. Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2175 and HP15_2176 are separated by 68 nucleotides HP15_2176 and HP15_2177 are separated by 282 nucleotides HP15_2177 and HP15_2178 are separated by 17 nucleotides
HP15_2175: HP15_2175 - glyceraldehyde-3-phosphate dehydrogenase, type I, at 2,286,037 to 2,287,041
_2175
HP15_2176: HP15_2176 - pyruvate kinase II, at 2,287,110 to 2,288,558
_2176
HP15_2177: HP15_2177 - 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase, at 2,288,841 to 2,289,506
_2177
HP15_2178: HP15_2178 - 6-phosphogluconolactonase, at 2,289,524 to 2,290,237
_2178
Position (kb)
2287
2288
2289 Strain fitness (log2 ratio)
-1
0
1 at 2286.122 kb on + strand at 2286.147 kb on + strand, within HP15_2175 at 2286.183 kb on + strand, within HP15_2175 at 2286.330 kb on - strand, within HP15_2175 at 2286.362 kb on - strand, within HP15_2175 at 2286.372 kb on + strand, within HP15_2175 at 2286.402 kb on - strand, within HP15_2175 at 2286.402 kb on - strand, within HP15_2175 at 2286.409 kb on - strand, within HP15_2175 at 2286.421 kb on - strand, within HP15_2175 at 2286.529 kb on + strand, within HP15_2175 at 2286.529 kb on + strand, within HP15_2175 at 2286.574 kb on + strand, within HP15_2175 at 2286.610 kb on + strand, within HP15_2175 at 2286.612 kb on + strand, within HP15_2175 at 2286.625 kb on - strand, within HP15_2175 at 2286.987 kb on - strand at 2287.023 kb on + strand at 2287.031 kb on - strand at 2287.031 kb on - strand at 2287.318 kb on + strand, within HP15_2176 at 2287.371 kb on + strand, within HP15_2176 at 2287.409 kb on + strand, within HP15_2176 at 2287.451 kb on + strand, within HP15_2176 at 2287.948 kb on - strand, within HP15_2176 at 2287.968 kb on + strand, within HP15_2176 at 2288.191 kb on + strand, within HP15_2176 at 2288.232 kb on - strand, within HP15_2176 at 2288.256 kb on + strand, within HP15_2176 at 2288.295 kb on + strand, within HP15_2176 at 2288.676 kb on + strand at 2288.725 kb on - strand at 2288.767 kb on - strand at 2288.860 kb on + strand at 2288.868 kb on - strand at 2288.952 kb on - strand, within HP15_2177 at 2289.197 kb on + strand, within HP15_2177 at 2289.229 kb on + strand, within HP15_2177 at 2289.285 kb on - strand, within HP15_2177 at 2289.444 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.32 mM remove 2,286,122 + +0.2 2,286,147 + HP15_2175 0.11 -0.5 2,286,183 + HP15_2175 0.15 -0.7 2,286,330 - HP15_2175 0.29 +0.2 2,286,362 - HP15_2175 0.32 +0.2 2,286,372 + HP15_2175 0.33 +0.0 2,286,402 - HP15_2175 0.36 -0.2 2,286,402 - HP15_2175 0.36 +0.0 2,286,409 - HP15_2175 0.37 -0.6 2,286,421 - HP15_2175 0.38 +0.3 2,286,529 + HP15_2175 0.49 +0.1 2,286,529 + HP15_2175 0.49 +0.5 2,286,574 + HP15_2175 0.53 -0.5 2,286,610 + HP15_2175 0.57 +0.5 2,286,612 + HP15_2175 0.57 +0.5 2,286,625 - HP15_2175 0.59 -0.0 2,286,987 - +0.6 2,287,023 + +0.2 2,287,031 - -0.8 2,287,031 - +0.6 2,287,318 + HP15_2176 0.14 +0.7 2,287,371 + HP15_2176 0.18 +0.6 2,287,409 + HP15_2176 0.21 +1.5 2,287,451 + HP15_2176 0.24 +1.6 2,287,948 - HP15_2176 0.58 +1.0 2,287,968 + HP15_2176 0.59 +0.9 2,288,191 + HP15_2176 0.75 +0.8 2,288,232 - HP15_2176 0.77 +1.6 2,288,256 + HP15_2176 0.79 +0.7 2,288,295 + HP15_2176 0.82 +0.5 2,288,676 + -0.5 2,288,725 - -0.8 2,288,767 - -0.1 2,288,860 + -0.0 2,288,868 - -0.6 2,288,952 - HP15_2177 0.17 +0.2 2,289,197 + HP15_2177 0.53 +0.1 2,289,229 + HP15_2177 0.58 +0.4 2,289,285 - HP15_2177 0.67 +0.1 2,289,444 - -0.5
Or see this region's nucleotide sequence