Experiment: L-Methionine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO2492 and SO2493 are separated by 12 nucleotides SO2493 and SO2494 are separated by 140 nucleotides
SO2492: SO2492 - acyl-CoA dehydrogenase (1.3.8.-) (from data) , at 2,615,773 to 2,618,052
SO2492
SO2493: SO2493 - transcriptional regulator, TetR family (NCBI ptt file), at 2,618,065 to 2,618,784
SO2493
SO2494: SO2494 - zinc-dependent metallopeptidase (NCBI ptt file), at 2,618,925 to 2,620,784
SO2494
Position (kb)
2618
2619 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2617.115 kb on - strand, within SO2492 at 2617.153 kb on + strand, within SO2492 at 2617.166 kb on - strand, within SO2492 at 2617.232 kb on - strand, within SO2492 at 2617.317 kb on - strand, within SO2492 at 2617.562 kb on - strand, within SO2492 at 2617.781 kb on - strand, within SO2492 at 2617.781 kb on - strand, within SO2492 at 2617.786 kb on - strand, within SO2492 at 2617.979 kb on - strand at 2618.146 kb on - strand, within SO2493 at 2618.202 kb on + strand, within SO2493 at 2618.217 kb on + strand, within SO2493 at 2618.482 kb on - strand, within SO2493 at 2618.484 kb on - strand, within SO2493 at 2618.517 kb on + strand, within SO2493 at 2618.525 kb on - strand, within SO2493 at 2618.530 kb on + strand, within SO2493 at 2618.530 kb on + strand, within SO2493 at 2618.538 kb on - strand, within SO2493 at 2618.538 kb on - strand, within SO2493 at 2618.596 kb on - strand, within SO2493 at 2618.603 kb on - strand, within SO2493 at 2618.606 kb on - strand, within SO2493 at 2618.674 kb on - strand, within SO2493 at 2618.674 kb on - strand, within SO2493 at 2618.808 kb on + strand at 2619.071 kb on - strand at 2619.071 kb on - strand at 2619.071 kb on - strand at 2619.300 kb on + strand, within SO2494 at 2619.361 kb on - strand, within SO2494 at 2619.361 kb on - strand, within SO2494 at 2619.564 kb on + strand, within SO2494 at 2619.667 kb on - strand, within SO2494 at 2619.667 kb on - strand, within SO2494
Per-strain Table
Position Strand Gene LocusTag Fraction L-Methionine (N) remove 2,617,115 - SO2492 0.59 -0.5 2,617,153 + SO2492 0.61 -0.5 2,617,166 - SO2492 0.61 -0.6 2,617,232 - SO2492 0.64 -2.2 2,617,317 - SO2492 0.68 +0.1 2,617,562 - SO2492 0.78 -3.7 2,617,781 - SO2492 0.88 +0.4 2,617,781 - SO2492 0.88 -1.3 2,617,786 - SO2492 0.88 -0.7 2,617,979 - -1.1 2,618,146 - SO2493 0.11 -0.8 2,618,202 + SO2493 0.19 -0.8 2,618,217 + SO2493 0.21 -2.8 2,618,482 - SO2493 0.58 -2.6 2,618,484 - SO2493 0.58 -1.7 2,618,517 + SO2493 0.63 -2.2 2,618,525 - SO2493 0.64 +0.0 2,618,530 + SO2493 0.65 -1.7 2,618,530 + SO2493 0.65 -0.8 2,618,538 - SO2493 0.66 +3.0 2,618,538 - SO2493 0.66 -0.9 2,618,596 - SO2493 0.74 -1.8 2,618,603 - SO2493 0.75 -0.7 2,618,606 - SO2493 0.75 -0.5 2,618,674 - SO2493 0.85 -2.8 2,618,674 - SO2493 0.85 -2.5 2,618,808 + -1.0 2,619,071 - +2.0 2,619,071 - -1.6 2,619,071 - -1.3 2,619,300 + SO2494 0.20 -0.2 2,619,361 - SO2494 0.23 -1.2 2,619,361 - SO2494 0.23 -1.1 2,619,564 + SO2494 0.34 +2.0 2,619,667 - SO2494 0.40 -3.0 2,619,667 - SO2494 0.40 +0.6
Or see this region's nucleotide sequence