Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2549 and HP15_2550 are separated by 23 nucleotides HP15_2550 and HP15_2551 are separated by 1 nucleotides HP15_2551 and HP15_2552 are separated by 3 nucleotides HP15_2552 and HP15_2553 overlap by 1 nucleotides
HP15_2549: HP15_2549 - adenine phosphoribosyltransferase, at 2,695,831 to 2,696,373
_2549
HP15_2550: HP15_2550 - fumarylacetoacetate hydrolase family protein, at 2,696,397 to 2,697,059
_2550
HP15_2551: HP15_2551 - ABC-1 domain protein, at 2,697,061 to 2,698,416
_2551
HP15_2552: HP15_2552 - silent information regulator protein Sir2, at 2,698,420 to 2,699,097
_2552
HP15_2553: HP15_2553 - oxidoreductase, FAD-binding protein, at 2,699,097 to 2,700,536
_2553
Position (kb)
2697
2698
2699 Strain fitness (log2 ratio)
-2
-1
0
1 at 2696.076 kb on - strand, within HP15_2549 at 2696.152 kb on - strand, within HP15_2549 at 2696.348 kb on - strand at 2696.348 kb on - strand at 2696.499 kb on - strand, within HP15_2550 at 2696.499 kb on - strand, within HP15_2550 at 2696.640 kb on + strand, within HP15_2550 at 2696.684 kb on + strand, within HP15_2550 at 2696.769 kb on - strand, within HP15_2550 at 2697.128 kb on + strand at 2697.129 kb on + strand at 2697.278 kb on + strand, within HP15_2551 at 2697.537 kb on - strand, within HP15_2551 at 2697.755 kb on - strand, within HP15_2551 at 2697.828 kb on + strand, within HP15_2551 at 2697.852 kb on + strand, within HP15_2551 at 2697.852 kb on + strand, within HP15_2551 at 2697.927 kb on + strand, within HP15_2551 at 2698.063 kb on + strand, within HP15_2551 at 2698.077 kb on - strand, within HP15_2551 at 2698.126 kb on - strand, within HP15_2551 at 2698.216 kb on + strand, within HP15_2551 at 2698.216 kb on + strand, within HP15_2551 at 2698.224 kb on - strand, within HP15_2551 at 2698.305 kb on + strand at 2698.362 kb on + strand at 2698.483 kb on - strand at 2698.509 kb on + strand, within HP15_2552 at 2698.517 kb on - strand, within HP15_2552 at 2698.532 kb on + strand, within HP15_2552 at 2698.628 kb on + strand, within HP15_2552 at 2698.636 kb on - strand, within HP15_2552 at 2698.934 kb on + strand, within HP15_2552 at 2698.942 kb on - strand, within HP15_2552 at 2699.010 kb on - strand, within HP15_2552 at 2699.010 kb on - strand, within HP15_2552 at 2699.035 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 2,696,076 - HP15_2549 0.45 +0.2 2,696,152 - HP15_2549 0.59 -0.2 2,696,348 - -0.1 2,696,348 - +0.5 2,696,499 - HP15_2550 0.15 +0.2 2,696,499 - HP15_2550 0.15 -0.1 2,696,640 + HP15_2550 0.37 +0.3 2,696,684 + HP15_2550 0.43 -0.2 2,696,769 - HP15_2550 0.56 -0.9 2,697,128 + +1.1 2,697,129 + +0.0 2,697,278 + HP15_2551 0.16 +0.2 2,697,537 - HP15_2551 0.35 -0.3 2,697,755 - HP15_2551 0.51 -1.1 2,697,828 + HP15_2551 0.57 +0.1 2,697,852 + HP15_2551 0.58 -0.0 2,697,852 + HP15_2551 0.58 -0.2 2,697,927 + HP15_2551 0.64 -0.2 2,698,063 + HP15_2551 0.74 -0.7 2,698,077 - HP15_2551 0.75 -0.5 2,698,126 - HP15_2551 0.79 -0.1 2,698,216 + HP15_2551 0.85 -0.3 2,698,216 + HP15_2551 0.85 -1.8 2,698,224 - HP15_2551 0.86 -0.4 2,698,305 + +0.6 2,698,362 + -0.1 2,698,483 - +0.3 2,698,509 + HP15_2552 0.13 +0.1 2,698,517 - HP15_2552 0.14 +0.4 2,698,532 + HP15_2552 0.17 +0.3 2,698,628 + HP15_2552 0.31 -0.3 2,698,636 - HP15_2552 0.32 +0.3 2,698,934 + HP15_2552 0.76 -0.6 2,698,942 - HP15_2552 0.77 -0.4 2,699,010 - HP15_2552 0.87 +0.1 2,699,010 - HP15_2552 0.87 +1.3 2,699,035 + -0.3
Or see this region's nucleotide sequence