Strain Fitness in Marinobacter adhaerens HP15 around HP15_1177

Experiment: m.b. Nickel (II) chloride 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1176 and HP15_1177 are separated by 11 nucleotidesHP15_1177 and HP15_1178 overlap by 1 nucleotidesHP15_1178 and HP15_1179 are separated by 18 nucleotides HP15_1176: HP15_1176 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, at 1,209,450 to 1,210,475 _1176 HP15_1177: HP15_1177 - (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase, at 1,210,487 to 1,210,924 _1177 HP15_1178: HP15_1178 - acyl-(acyl-carrier-protein)-UDP-N- acetylglucosamine O-acyltransferase, at 1,210,924 to 1,211,715 _1178 HP15_1179: HP15_1179 - lipid-A-disaccharide synthase, at 1,211,734 to 1,212,915 _1179 Position (kb) 1210 1211Strain fitness (log2 ratio) -1 0 1at 1210.747 kb on - strand, within HP15_1177at 1210.771 kb on + strand, within HP15_1177

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM
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1,210,747 - HP15_1177 0.59 -1.6
1,210,771 + HP15_1177 0.65 -1.1

Or see this region's nucleotide sequence