Strain Fitness in Shewanella amazonensis SB2B around Sama_3231

Experiment: Chloride 500 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloride 500 mM
3,823,427	-		Sama_3229	0.72	+0.7
3,823,441	+		Sama_3229	0.73	+0.8
3,823,444	+		Sama_3229	0.73	-0.2
3,823,445	-		Sama_3229	0.73	-0.1
3,823,445	-		Sama_3229	0.73	-0.7
3,823,447	+		Sama_3229	0.74	-2.1
3,823,448	-		Sama_3229	0.74	+1.3
3,823,461	+		Sama_3229	0.75	+0.2
3,823,484	+		Sama_3229	0.77	+0.2
3,823,484	+		Sama_3229	0.77	-0.9
3,823,484	+		Sama_3229	0.77	-2.1
3,823,484	+		Sama_3229	0.77	-0.6
3,823,484	+		Sama_3229	0.77	-0.1
3,823,485	-		Sama_3229	0.77	-0.1
3,823,485	-		Sama_3229	0.77	-0.8
3,823,485	-		Sama_3229	0.77	-1.2
3,823,486	+		Sama_3229	0.77	+1.0
3,823,486	+		Sama_3229	0.77	-0.6
3,823,487	-		Sama_3229	0.78	+0.5
3,823,585	+		Sama_3229	0.87	-0.2
3,823,586	-		Sama_3229	0.87	+1.2
3,823,586	-		Sama_3229	0.87	-0.1
3,823,586	-		Sama_3229	0.87	-1.8
3,823,586	-		Sama_3229	0.87	-3.6
3,823,586	-		Sama_3229	0.87	+0.7
3,823,591	+		Sama_3229	0.88	+0.3
3,823,621	+				-0.3
3,823,622	-				-0.2
3,823,662	+				+0.2
3,823,662	+				+0.2
3,823,663	-				+0.9
3,823,663	-				-1.3
3,823,666	-				-0.8
3,823,690	+				-0.1
3,823,696	+				-0.6
3,823,697	-				+0.3
3,823,697	-				-0.3
3,823,701	+				+0.1
3,823,701	+				-2.3
3,823,734	+				-0.1
3,823,735	-				-0.4
3,823,775	+				+0.6
3,823,775	+				+0.2
3,823,804	+				+0.5
3,823,804	+				-0.1
3,823,805	-				-0.1
3,823,805	-				-0.1
3,823,807	+				-0.1
3,823,807	+				+0.1
3,823,808	-				-0.4
3,823,808	-				+1.2
3,823,818	+				+0.2
3,823,818	+				-1.1
3,823,818	+				+0.1
3,823,819	-				+0.5
3,823,825	-				-0.7
3,823,825	-				-0.0
3,823,831	+				+0.2
3,823,832	-				-2.3
3,823,845	-				+0.6
3,823,888	-				+0.9
3,823,944	-				-1.7
3,823,961	+		Sama_3230	0.12	+0.1
3,823,973	+		Sama_3230	0.14	-0.2
3,823,973	+		Sama_3230	0.14	-1.0
3,823,973	+		Sama_3230	0.14	+0.3
3,823,973	+		Sama_3230	0.14	-0.5
3,823,974	-		Sama_3230	0.15	-1.2
3,823,974	-		Sama_3230	0.15	+0.4
3,823,974	-		Sama_3230	0.15	+0.6
3,823,981	-		Sama_3230	0.16	-0.7
3,824,013	-		Sama_3230	0.22	+0.4
3,824,013	-		Sama_3230	0.22	-0.1
3,824,013	-		Sama_3230	0.22	+0.2
3,824,013	-		Sama_3230	0.22	-0.5
3,824,013	-		Sama_3230	0.22	-1.2
3,824,013	-		Sama_3230	0.22	-1.3
3,824,013	-		Sama_3230	0.22	-0.2
3,824,029	+		Sama_3230	0.26	-0.1
3,824,029	+		Sama_3230	0.26	-1.3
3,824,029	+		Sama_3230	0.26	-0.5
3,824,030	-		Sama_3230	0.26	+0.1
3,824,030	-		Sama_3230	0.26	-0.5
3,824,030	-		Sama_3230	0.26	+1.5
3,824,030	-		Sama_3230	0.26	+0.4
3,824,030	-		Sama_3230	0.26	+0.5
3,824,030	-		Sama_3230	0.26	+0.1
3,824,030	-		Sama_3230	0.26	-0.4
3,824,064	+		Sama_3230	0.33	+0.3
3,824,064	+		Sama_3230	0.33	+1.1
3,824,065	-		Sama_3230	0.33	-1.1
3,824,065	-		Sama_3230	0.33	-0.8
3,824,091	+		Sama_3230	0.38	+0.3
3,824,092	-		Sama_3230	0.38	+1.9
3,824,092	-		Sama_3230	0.38	-0.6
3,824,092	-		Sama_3230	0.38	-2.4
3,824,092	-		Sama_3230	0.38	+0.8
3,824,092	-		Sama_3230	0.38	-0.5
3,824,092	-		Sama_3230	0.38	-0.6
3,824,129	+		Sama_3230	0.46	-0.4
3,824,129	+		Sama_3230	0.46	+0.6
3,824,130	-		Sama_3230	0.46	+0.1
3,824,130	-		Sama_3230	0.46	-0.7
3,824,130	-		Sama_3230	0.46	-0.4
3,824,130	-		Sama_3230	0.46	-1.1
3,824,130	-		Sama_3230	0.46	+1.0
3,824,145	+		Sama_3230	0.49	+0.6
3,824,145	+		Sama_3230	0.49	+0.8
3,824,146	-		Sama_3230	0.49	+0.9
3,824,160	+		Sama_3230	0.52	+0.3
3,824,160	+		Sama_3230	0.52	-0.1
3,824,160	+		Sama_3230	0.52	-0.3
3,824,160	+		Sama_3230	0.52	+0.5
3,824,160	+		Sama_3230	0.52	-0.7
3,824,160	+		Sama_3230	0.52	-0.8
3,824,161	-		Sama_3230	0.52	+0.3
3,824,161	-		Sama_3230	0.52	+0.0
3,824,161	-		Sama_3230	0.52	-1.2
3,824,161	-		Sama_3230	0.52	+0.3
3,824,161	-		Sama_3230	0.52	-1.5
3,824,161	-		Sama_3230	0.52	+0.3
3,824,174	+		Sama_3230	0.54	+0.4
3,824,174	+		Sama_3230	0.54	-0.4
3,824,174	+		Sama_3230	0.54	+0.6
3,824,174	+		Sama_3230	0.54	-0.3
3,824,174	+		Sama_3230	0.54	-0.8
3,824,175	-		Sama_3230	0.55	+0.4
3,824,175	-		Sama_3230	0.55	-1.1
3,824,175	-		Sama_3230	0.55	+0.1
3,824,175	-		Sama_3230	0.55	+0.3
3,824,175	-		Sama_3230	0.55	+0.7
3,824,175	-		Sama_3230	0.55	-0.1
3,824,175	-		Sama_3230	0.55	-1.2
3,824,175	-		Sama_3230	0.55	+0.1
3,824,195	-		Sama_3230	0.59	-0.2
3,824,243	+		Sama_3230	0.68	-0.7
3,824,270	+		Sama_3230	0.74	+0.5
3,824,270	+		Sama_3230	0.74	-0.7
3,824,270	+		Sama_3230	0.74	-0.7
3,824,270	+		Sama_3230	0.74	-0.3
3,824,270	+		Sama_3230	0.74	+0.1
3,824,270	+		Sama_3230	0.74	-1.0
3,824,270	+		Sama_3230	0.74	-0.8
3,824,271	-		Sama_3230	0.74	+0.3
3,824,271	-		Sama_3230	0.74	-0.1
3,824,272	+		Sama_3230	0.74	+0.4
3,824,272	+		Sama_3230	0.74	+0.9
3,824,301	+		Sama_3230	0.80	-0.4
3,824,301	+		Sama_3230	0.80	+0.6
3,824,301	+		Sama_3230	0.80	-0.3
3,824,301	+		Sama_3230	0.80	-0.0
3,824,301	+		Sama_3230	0.80	-0.1
3,824,301	+		Sama_3230	0.80	-1.1
3,824,301	+		Sama_3230	0.80	-1.5
3,824,301	+		Sama_3230	0.80	+0.3
3,824,302	-		Sama_3230	0.80	-0.7
3,824,302	-		Sama_3230	0.80	+3.5
3,824,302	-		Sama_3230	0.80	+0.9
3,824,339	+		Sama_3230	0.87	-0.2
3,824,339	+		Sama_3230	0.87	+0.2
3,824,340	-		Sama_3230	0.88	+0.6
3,824,400	-				-0.0
3,824,400	-				-0.4
3,824,459	+		Sama_3231	0.11	+0.0
3,824,459	+		Sama_3231	0.11	+2.2
3,824,466	-		Sama_3231	0.14	+0.1
3,824,466	-		Sama_3231	0.14	+0.6
3,824,524	+		Sama_3231	0.34	+0.5
3,824,524	+		Sama_3231	0.34	+0.5
3,824,524	+		Sama_3231	0.34	+0.9
3,824,524	+		Sama_3231	0.34	+1.1
3,824,524	+		Sama_3231	0.34	+0.7
3,824,524	+		Sama_3231	0.34	-1.4
3,824,524	+		Sama_3231	0.34	+0.5
3,824,525	-		Sama_3231	0.35	+0.1
3,824,525	-		Sama_3231	0.35	-0.4
3,824,525	-		Sama_3231	0.35	-0.3
3,824,525	-		Sama_3231	0.35	+0.5
3,824,525	-		Sama_3231	0.35	+1.2
3,824,600	+		Sama_3231	0.61	-0.0
3,824,600	+		Sama_3231	0.61	-1.3
3,824,600	+		Sama_3231	0.61	+0.8
3,824,600	+		Sama_3231	0.61	+0.7
3,824,601	-		Sama_3231	0.62	+0.8
3,824,601	-		Sama_3231	0.62	+1.9
3,824,618	+		Sama_3231	0.68	-0.5
3,824,619	-		Sama_3231	0.68	+0.5
3,824,619	-		Sama_3231	0.68	-1.2
3,824,624	+		Sama_3231	0.70	+0.1
3,824,624	+		Sama_3231	0.70	-0.7
3,824,624	+		Sama_3231	0.70	+0.3
3,824,625	-		Sama_3231	0.70	+1.1
3,824,625	-		Sama_3231	0.70	+0.3
3,824,625	-		Sama_3231	0.70	-0.4
3,824,632	+		Sama_3231	0.73	+1.1
3,824,632	+		Sama_3231	0.73	+0.7
3,824,661	+		Sama_3231	0.83	-0.3
3,824,662	-		Sama_3231	0.83	+0.2
3,824,763	+				+0.8
3,824,763	+				-0.8
3,824,763	+				+0.6
3,824,763	+				+0.1
3,824,764	-				-0.3
3,824,764	-				+0.2
3,824,764	-				-0.1
3,824,764	-				-1.1
3,824,769	-				+0.9
3,824,769	-				+0.3
3,824,769	-				-0.3
3,824,777	+				-1.1
3,824,777	+				-0.1
3,824,778	-				+0.1
3,824,778	-				-0.4
3,824,778	-				+0.2
3,824,789	+				-1.2
3,824,790	-				-0.1
3,824,790	-				-0.7
3,824,794	+				+0.7
3,824,794	+				+1.2
3,824,794	+				-1.7
3,824,794	+				+1.3
3,824,794	+				-0.0
3,824,795	-				-1.4
3,824,795	-				+0.0
3,824,795	-				-0.1
3,824,795	-				+0.9
3,824,808	+				-0.7
3,824,808	+				+0.0
3,824,851	+				+0.0
3,824,851	+				-1.5
3,824,852	-				-0.7
3,824,852	-				-1.6
3,824,852	-				-0.5
3,824,852	-				-0.7
3,824,852	-				+0.8
3,824,856	+				-0.2
3,824,856	+				-1.4
3,824,856	+				-0.2
3,824,856	+				+0.3
3,824,857	-				-0.6
3,824,867	+				+1.2
3,824,868	-				-0.2
3,824,868	-				-0.4
3,824,868	-				+0.9
3,824,868	-				-0.8
3,824,868	-				-0.1
3,824,868	-				+0.3
3,824,877	-				+0.1
3,824,877	-				-0.9
3,824,916	+				+0.4
3,824,917	-				-0.3
3,824,924	-				+0.9
3,824,924	-				+0.3
3,824,924	-				-0.4
3,824,946	+				-0.5
3,824,957	+		Sama_3232	0.11	+0.2
3,824,957	+		Sama_3232	0.11	+1.5
3,824,957	+		Sama_3232	0.11	+0.7
3,824,957	+		Sama_3232	0.11	+0.3
3,824,957	+		Sama_3232	0.11	+0.2
3,824,957	+		Sama_3232	0.11	-0.7
3,824,957	+		Sama_3232	0.11	+0.2
3,824,957	+		Sama_3232	0.11	+0.3
3,824,957	+		Sama_3232	0.11	-0.9
3,824,957	+		Sama_3232	0.11	+0.1
3,824,957	+		Sama_3232	0.11	+0.5
3,824,957	+		Sama_3232	0.11	-0.3
3,824,957	+		Sama_3232	0.11	-0.4
3,824,957	+		Sama_3232	0.11	+0.1
3,824,957	+		Sama_3232	0.11	+0.0
3,824,958	-		Sama_3232	0.11	-0.9
3,824,958	-		Sama_3232	0.11	+0.9
3,824,958	-		Sama_3232	0.11	-0.7
3,824,958	-		Sama_3232	0.11	-1.3
3,824,958	-		Sama_3232	0.11	-0.5
3,824,958	-		Sama_3232	0.11	+0.1
3,824,958	-		Sama_3232	0.11	+0.1
3,825,102	-		Sama_3232	0.39	-0.2
3,825,102	-		Sama_3232	0.39	-0.3
3,825,135	+		Sama_3232	0.46	+0.6
3,825,135	+		Sama_3232	0.46	-1.1
3,825,136	-		Sama_3232	0.46	-1.3
3,825,166	+		Sama_3232	0.52	-0.1
3,825,166	+		Sama_3232	0.52	+0.2
3,825,167	-		Sama_3232	0.52	-0.4
3,825,167	-		Sama_3232	0.52	-0.8
3,825,230	+		Sama_3232	0.65	-0.7
3,825,231	-		Sama_3232	0.65	+0.2
3,825,243	+		Sama_3232	0.67	+0.9
3,825,287	-		Sama_3232	0.76	+0.1
3,825,287	-		Sama_3232	0.76	+0.6
3,825,287	-		Sama_3232	0.76	+0.2
3,825,290	+		Sama_3232	0.76	+0.7
3,825,291	-		Sama_3232	0.76	-0.4
3,825,291	-		Sama_3232	0.76	+0.5
3,825,337	+		Sama_3232	0.85	+1.4
3,825,338	-		Sama_3232	0.86	+0.1
3,825,338	-		Sama_3232	0.86	+0.0
3,825,374	+				-0.2
3,825,374	+				+0.0
3,825,374	+				+0.9
3,825,374	+				-0.2
3,825,374	+				+0.4
3,825,375	-				+0.3
3,825,375	-				+0.0
3,825,375	-				-0.1
3,825,375	-				-0.8
3,825,375	-				-0.1
3,825,375	-				+0.8
3,825,375	-				-1.3
3,825,375	-				-0.9
3,825,375	-				+0.8
3,825,375	-				+0.2
3,825,375	-				-0.1
3,825,375	-				-0.2
3,825,375	-				+0.1
3,825,378	+				+0.1
3,825,379	-				-1.5
3,825,430	+				+0.8
3,825,430	+				+0.1
3,825,430	+				+0.1
3,825,430	+				+0.6
3,825,430	+				-0.0
3,825,431	-				-0.5
3,825,431	-				-0.1
3,825,431	-				+0.0
3,825,431	-				+0.5
3,825,431	-				-2.3
3,825,431	-				+0.9
3,825,431	-				+0.5
3,825,431	-				-0.0
3,825,431	-				-0.3
3,825,431	-				+0.9
3,825,431	-				-0.7
3,825,431	-				-0.1
3,825,483	-				-0.7
3,825,495	-				-0.4
3,825,573	+				-0.2
3,825,573	+				+0.7
3,825,574	-				+1.1
3,825,574	-				+1.3
3,825,574	-				-1.0
3,825,574	-				+0.5
3,825,582	+				+1.5
3,825,582	+				-1.5
3,825,615	+				-0.2
3,825,615	+				+0.2
3,825,615	+				-0.4
3,825,615	+				+0.2
3,825,616	-				-0.4
3,825,616	-				-0.1
3,825,653	+				-0.3
3,825,654	-				-2.0
3,825,654	-				-1.1
3,825,654	-				-0.0
3,825,671	+				+0.9
3,825,702	+				+1.5
3,825,702	+				+0.9
3,825,702	+				+0.4
3,825,702	+				-0.1
3,825,702	+				+0.6
3,825,702	+				+1.0
3,825,702	+				-0.7
3,825,702	+				+0.7
3,825,702	+				-1.0
3,825,702	+				+1.5
3,825,702	+				+0.9
3,825,702	+				-0.2
3,825,702	+				-0.6
3,825,703	-				+0.2
3,825,703	-				+0.4
3,825,703	-				-0.3
3,825,703	-				-0.2
3,825,703	-				-0.5
3,825,703	-				+0.1