Strain Fitness in Shewanella amazonensis SB2B around Sama_3466

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
4,095,879	-				+0.1
4,095,937	-				+1.2
4,095,937	-				+0.9
4,096,007	+				-0.0
4,096,008	-				-1.1
4,096,008	-				-1.7
4,096,075	+				-0.9
4,096,075	+				+0.3
4,096,076	-				-0.5
4,096,090	-				+2.7
4,096,097	+				+2.1
4,096,098	-				+2.3
4,096,120	+				-0.8
4,096,120	+				-2.2
4,096,120	+				+0.6
4,096,120	+				-1.6
4,096,120	+				-0.5
4,096,121	-				+1.9
4,096,121	-				+0.3
4,096,121	-				-0.1
4,096,121	-				-0.6
4,096,121	-				-1.8
4,096,182	+		Sama_3466	0.11	+1.4
4,096,182	+		Sama_3466	0.11	-0.5
4,096,183	-		Sama_3466	0.11	-0.8
4,096,183	-		Sama_3466	0.11	+2.8
4,096,210	+		Sama_3466	0.14	-1.6
4,096,247	-		Sama_3466	0.18	-1.3
4,096,266	-		Sama_3466	0.20	-0.5
4,096,266	-		Sama_3466	0.20	-1.5
4,096,300	+		Sama_3466	0.23	-0.8
4,096,300	+		Sama_3466	0.23	-0.3
4,096,300	+		Sama_3466	0.23	-0.1
4,096,301	-		Sama_3466	0.23	+0.2
4,096,301	-		Sama_3466	0.23	-2.3
4,096,316	-		Sama_3466	0.25	+1.4
4,096,316	-		Sama_3466	0.25	+0.4
4,096,334	+		Sama_3466	0.27	-0.8
4,096,335	-		Sama_3466	0.27	-0.7
4,096,391	+		Sama_3466	0.33	-0.3
4,096,392	-		Sama_3466	0.33	-0.5
4,096,409	+		Sama_3466	0.34	+1.3
4,096,409	+		Sama_3466	0.34	+1.9
4,096,409	+		Sama_3466	0.34	-0.3
4,096,410	-		Sama_3466	0.34	+0.3
4,096,410	-		Sama_3466	0.34	+1.9
4,096,416	+		Sama_3466	0.35	-0.1
4,096,416	+		Sama_3466	0.35	-0.5
4,096,417	-		Sama_3466	0.35	-0.5
4,096,421	+		Sama_3466	0.36	-0.0
4,096,421	+		Sama_3466	0.36	-1.9
4,096,421	+		Sama_3466	0.36	+0.2
4,096,421	+		Sama_3466	0.36	-0.8
4,096,421	+		Sama_3466	0.36	+0.5
4,096,421	+		Sama_3466	0.36	+0.4
4,096,421	+		Sama_3466	0.36	-0.6
4,096,421	+		Sama_3466	0.36	+0.8
4,096,421	+		Sama_3466	0.36	-0.6
4,096,421	+		Sama_3466	0.36	-0.1
4,096,421	+		Sama_3466	0.36	-0.7
4,096,421	+		Sama_3466	0.36	-0.9
4,096,421	+		Sama_3466	0.36	-0.5
4,096,421	+		Sama_3466	0.36	+0.3
4,096,422	-		Sama_3466	0.36	-1.2
4,096,422	-		Sama_3466	0.36	-1.3
4,096,422	-		Sama_3466	0.36	-1.6
4,096,422	-		Sama_3466	0.36	+2.3
4,096,422	-		Sama_3466	0.36	-0.7
4,096,422	-		Sama_3466	0.36	-3.0
4,096,422	-		Sama_3466	0.36	+0.5
4,096,422	-		Sama_3466	0.36	-0.7
4,096,422	-		Sama_3466	0.36	+0.5
4,096,425	+		Sama_3466	0.36	-0.1
4,096,425	+		Sama_3466	0.36	-1.5
4,096,426	-		Sama_3466	0.36	-1.1
4,096,579	-		Sama_3466	0.52	-0.7
4,096,579	-		Sama_3466	0.52	-0.1
4,096,579	-		Sama_3466	0.52	-2.4
4,096,581	-		Sama_3466	0.52	-1.1
4,096,581	-		Sama_3466	0.52	-0.1
4,096,581	-		Sama_3466	0.52	-2.3
4,096,646	-		Sama_3466	0.59	-0.7
4,096,646	-		Sama_3466	0.59	-1.0
4,096,646	-		Sama_3466	0.59	-1.7
4,096,707	-		Sama_3466	0.65	-1.0
4,096,711	+		Sama_3466	0.66	-1.5
4,096,711	+		Sama_3466	0.66	-1.0
4,096,711	+		Sama_3466	0.66	-2.1
4,096,711	+		Sama_3466	0.66	-0.7
4,096,711	+		Sama_3466	0.66	-0.1
4,096,711	+		Sama_3466	0.66	-0.6
4,096,712	-		Sama_3466	0.66	-0.1
4,096,712	-		Sama_3466	0.66	+0.9
4,096,712	-		Sama_3466	0.66	-1.1
4,096,712	-		Sama_3466	0.66	-0.4
4,096,712	-		Sama_3466	0.66	+0.1
4,096,712	-		Sama_3466	0.66	+1.1
4,096,726	-		Sama_3466	0.67	-0.7
4,096,736	-		Sama_3466	0.68	-2.1
4,096,736	-		Sama_3466	0.68	-0.5
4,096,793	+		Sama_3466	0.74	-0.9
4,096,794	-		Sama_3466	0.74	-0.1
4,096,857	+		Sama_3466	0.81	-1.1
4,096,928	+		Sama_3466	0.88	-1.6
4,096,956	-				-0.4
4,097,053	+				-0.5
4,097,054	-				-0.4
4,097,054	-				-1.5
4,097,054	-				-1.0
4,097,054	-				-0.5
4,097,054	-				-1.0
4,097,055	+				-0.2
4,097,055	+				+0.0
4,097,055	+				+0.1
4,097,055	+				-0.6
4,097,055	+				-0.7
4,097,056	-				-0.7
4,097,056	-				+5.0
4,097,056	-				-0.4
4,097,056	-				-0.7
4,097,056	-				-0.3
4,097,056	-				-1.0
4,097,056	-				+1.1
4,097,056	-				-1.0
4,097,129	-		Sama_3467	0.11	-1.4
4,097,142	+		Sama_3467	0.13	-1.5
4,097,162	+		Sama_3467	0.16	-0.8
4,097,163	-		Sama_3467	0.16	+0.1
4,097,192	+		Sama_3467	0.20	-1.1
4,097,193	-		Sama_3467	0.20	-0.7
4,097,193	-		Sama_3467	0.20	-1.6
4,097,206	-		Sama_3467	0.22	-1.5
4,097,287	-		Sama_3467	0.34	+0.0
4,097,360	-		Sama_3467	0.45	-0.1
4,097,372	+		Sama_3467	0.46	+0.3
4,097,424	+		Sama_3467	0.54	+0.9
4,097,424	+		Sama_3467	0.54	+0.0
4,097,424	+		Sama_3467	0.54	-1.0
4,097,424	+		Sama_3467	0.54	-0.4
4,097,424	+		Sama_3467	0.54	+1.6
4,097,425	-		Sama_3467	0.54	+0.3
4,097,425	-		Sama_3467	0.54	-0.4
4,097,515	+		Sama_3467	0.67	-1.8
4,097,516	-		Sama_3467	0.67	-0.6
4,097,516	-		Sama_3467	0.67	-0.9
4,097,561	+		Sama_3467	0.74	-0.8
4,097,598	-		Sama_3467	0.79	-1.1
4,097,711	-				-2.1
4,097,711	-				+0.3