Strain Fitness in Shewanella amazonensis SB2B around Sama_3438

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
4,068,278	+		Sama_3436	0.63	+0.3
4,068,278	+		Sama_3436	0.63	-0.9
4,068,279	-		Sama_3436	0.63	-0.5
4,068,279	-		Sama_3436	0.63	+3.4
4,068,315	+		Sama_3436	0.67	+4.3
4,068,315	+		Sama_3436	0.67	-0.1
4,068,358	+		Sama_3436	0.71	-0.6
4,068,359	-		Sama_3436	0.71	-1.4
4,068,406	+		Sama_3436	0.75	+0.3
4,068,406	+		Sama_3436	0.75	+0.9
4,068,406	+		Sama_3436	0.75	-0.1
4,068,407	-		Sama_3436	0.76	+4.3
4,068,407	-		Sama_3436	0.76	+2.1
4,068,408	+		Sama_3436	0.76	-1.3
4,068,409	-		Sama_3436	0.76	-1.8
4,068,409	-		Sama_3436	0.76	-1.6
4,068,409	-		Sama_3436	0.76	-1.5
4,068,409	-		Sama_3436	0.76	+0.9
4,068,409	-		Sama_3436	0.76	-2.7
4,068,436	+		Sama_3436	0.78	+0.4
4,068,436	+		Sama_3436	0.78	-0.1
4,068,437	-		Sama_3436	0.78	-0.5
4,068,440	+		Sama_3436	0.79	+3.8
4,068,440	+		Sama_3436	0.79	-0.5
4,068,440	+		Sama_3436	0.79	-1.4
4,068,440	+		Sama_3436	0.79	-0.5
4,068,440	+		Sama_3436	0.79	+3.2
4,068,440	+		Sama_3436	0.79	+3.1
4,068,440	+		Sama_3436	0.79	-1.0
4,068,440	+		Sama_3436	0.79	-2.1
4,068,440	+		Sama_3436	0.79	-1.1
4,068,441	-		Sama_3436	0.79	-1.4
4,068,441	-		Sama_3436	0.79	+1.5
4,068,441	-		Sama_3436	0.79	+1.2
4,068,441	-		Sama_3436	0.79	+0.3
4,068,441	-		Sama_3436	0.79	+0.6
4,068,441	-		Sama_3436	0.79	-2.8
4,068,441	-		Sama_3436	0.79	-3.2
4,068,441	-		Sama_3436	0.79	-1.5
4,068,441	-		Sama_3436	0.79	-0.5
4,068,483	+		Sama_3436	0.83	-1.3
4,068,484	-		Sama_3436	0.83	-1.8
4,068,541	+		Sama_3436	0.88	+3.7
4,068,541	+		Sama_3436	0.88	-1.1
4,068,541	+		Sama_3436	0.88	+0.3
4,068,542	-		Sama_3436	0.89	+0.9
4,068,542	-		Sama_3436	0.89	+1.4
4,068,542	-		Sama_3436	0.89	+3.0
4,068,549	+		Sama_3436	0.89	-1.7
4,068,549	+		Sama_3436	0.89	+1.1
4,068,550	-		Sama_3436	0.89	-0.0
4,068,571	+				-2.5
4,068,572	-				-1.6
4,068,572	-				+0.3
4,068,573	+				+0.0
4,068,573	+				+0.4
4,068,573	+				+3.5
4,068,573	+				-0.5
4,068,573	+				+2.2
4,068,573	+				+0.9
4,068,573	+				-1.1
4,068,574	-				-2.2
4,068,574	-				-1.1
4,068,574	-				+0.9
4,068,574	-				-0.1
4,068,574	-				-2.7
4,068,583	+				+0.3
4,068,584	-				-0.6
4,068,724	-		Sama_3437	0.11	-1.0
4,068,749	+		Sama_3437	0.15	+0.0
4,068,749	+		Sama_3437	0.15	-0.4
4,068,749	+		Sama_3437	0.15	-2.4
4,068,749	+		Sama_3437	0.15	+2.4
4,068,749	+		Sama_3437	0.15	+0.2
4,068,749	+		Sama_3437	0.15	+0.0
4,068,749	+		Sama_3437	0.15	+2.0
4,068,750	-		Sama_3437	0.15	-2.9
4,068,750	-		Sama_3437	0.15	+0.8
4,068,750	-		Sama_3437	0.15	+4.5
4,068,750	-		Sama_3437	0.15	-0.1
4,068,750	-		Sama_3437	0.15	-1.6
4,068,750	-		Sama_3437	0.15	-0.3
4,068,750	-		Sama_3437	0.15	-0.6
4,068,750	-		Sama_3437	0.15	+2.2
4,068,750	-		Sama_3437	0.15	+3.5
4,068,750	-		Sama_3437	0.15	+1.9
4,068,821	+		Sama_3437	0.27	-0.9
4,068,821	+		Sama_3437	0.27	-0.7
4,068,821	+		Sama_3437	0.27	+2.3
4,068,821	+		Sama_3437	0.27	+0.5
4,068,822	-		Sama_3437	0.27	+5.8
4,068,822	-		Sama_3437	0.27	+2.8
4,068,822	-		Sama_3437	0.27	-0.8
4,068,822	-		Sama_3437	0.27	-1.3
4,068,822	-		Sama_3437	0.27	-0.1
4,068,822	-		Sama_3437	0.27	+1.0
4,068,822	-		Sama_3437	0.27	-1.3
4,068,849	-		Sama_3437	0.31	-2.5
4,068,849	-		Sama_3437	0.31	-0.7
4,068,849	-		Sama_3437	0.31	-1.5
4,068,849	-		Sama_3437	0.31	+0.7
4,068,871	-		Sama_3437	0.35	+1.9
4,068,880	-		Sama_3437	0.36	-0.8
4,068,919	-		Sama_3437	0.43	+2.0
4,068,919	-		Sama_3437	0.43	-2.4
4,068,919	-		Sama_3437	0.43	+2.7
4,068,919	-		Sama_3437	0.43	-0.3
4,068,919	-		Sama_3437	0.43	+0.7
4,068,993	-		Sama_3437	0.55	-2.6
4,069,009	+		Sama_3437	0.57	-0.1
4,069,009	+		Sama_3437	0.57	-2.4
4,069,010	-		Sama_3437	0.58	-0.8
4,069,010	-		Sama_3437	0.58	+0.7
4,069,020	+		Sama_3437	0.59	+0.5
4,069,063	+		Sama_3437	0.66	-2.1
4,069,220	+				+0.4
4,069,220	+				+0.6
4,069,221	-				-2.2
4,069,221	-				+0.3
4,069,221	-				-0.9
4,069,221	-				+0.0
4,069,221	-				+1.0
4,069,284	+				+2.9
4,069,284	+				-1.0
4,069,285	-				+0.6
4,069,378	+		Sama_3438	0.23	-1.1
4,069,378	+		Sama_3438	0.23	-1.2
4,069,379	-		Sama_3438	0.23	-0.5
4,069,379	-		Sama_3438	0.23	-0.8
4,069,379	-		Sama_3438	0.23	-2.5
4,069,379	-		Sama_3438	0.23	+2.0
4,069,379	-		Sama_3438	0.23	-0.5
4,069,515	+		Sama_3438	0.53	+0.5
4,069,515	+		Sama_3438	0.53	+2.8
4,069,516	-		Sama_3438	0.53	+3.3
4,069,516	-		Sama_3438	0.53	+1.8
4,069,536	+		Sama_3438	0.58	-1.1
4,069,536	+		Sama_3438	0.58	-1.0
4,069,536	+		Sama_3438	0.58	-0.4
4,069,536	+		Sama_3438	0.58	+0.4
4,069,574	+		Sama_3438	0.66	+0.7
4,069,574	+		Sama_3438	0.66	-0.7
4,069,575	-		Sama_3438	0.66	-2.1
4,069,575	-		Sama_3438	0.66	-1.3
4,069,575	-		Sama_3438	0.66	+2.1
4,069,575	-		Sama_3438	0.66	-0.5
4,069,669	+		Sama_3438	0.87	-0.6
4,069,669	+		Sama_3438	0.87	-0.3
4,069,669	+		Sama_3438	0.87	+0.8
4,069,669	+		Sama_3438	0.87	-1.5
4,069,669	+		Sama_3438	0.87	+0.4
4,069,669	+		Sama_3438	0.87	-0.0
4,069,669	+		Sama_3438	0.87	-2.1
4,069,669	+		Sama_3438	0.87	-1.5
4,069,669	+		Sama_3438	0.87	-0.7
4,069,669	+		Sama_3438	0.87	-0.9
4,069,669	+		Sama_3438	0.87	-1.1
4,069,669	+		Sama_3438	0.87	+1.9
4,069,669	+		Sama_3438	0.87	+2.0
4,069,670	-		Sama_3438	0.87	+1.1
4,069,670	-		Sama_3438	0.87	+0.2
4,069,670	-		Sama_3438	0.87	+1.2
4,069,670	-		Sama_3438	0.87	-1.5
4,069,677	+		Sama_3438	0.89	+0.2
4,069,678	-		Sama_3438	0.89	-0.5
4,069,679	+		Sama_3438	0.89	-1.5
4,069,679	+		Sama_3438	0.89	-1.7
4,069,679	+		Sama_3438	0.89	-1.0
4,069,680	-		Sama_3438	0.89	-1.0
4,069,680	-		Sama_3438	0.89	+1.4
4,069,680	-		Sama_3438	0.89	-1.5
4,069,680	-		Sama_3438	0.89	-1.3
4,069,699	+				-1.0
4,069,699	+				-0.5
4,069,699	+				+1.6
4,069,700	-				+1.9
4,069,737	-				-1.7
4,069,737	-				-0.2
4,069,737	-				-2.8
4,069,917	+				-0.5
4,069,917	+				-0.1
4,069,917	+				+1.6
4,069,918	-				-1.1
4,069,918	-				-0.6
4,069,918	-				-0.7
4,069,918	-				+0.5
4,069,954	+		Sama_3439	0.10	+2.7
4,069,955	-		Sama_3439	0.10	-0.5
4,069,955	-		Sama_3439	0.10	+0.2
4,069,955	-		Sama_3439	0.10	-0.0
4,069,955	-		Sama_3439	0.10	+1.3
4,069,964	+		Sama_3439	0.11	+2.0
4,069,964	+		Sama_3439	0.11	+1.9
4,069,964	+		Sama_3439	0.11	+0.7
4,069,964	+		Sama_3439	0.11	-0.4
4,069,965	-		Sama_3439	0.11	+2.6
4,070,017	+		Sama_3439	0.13	-1.2
4,070,017	+		Sama_3439	0.13	-0.3
4,070,018	-		Sama_3439	0.13	-1.6
4,070,018	-		Sama_3439	0.13	-1.8
4,070,018	-		Sama_3439	0.13	+1.1
4,070,075	+		Sama_3439	0.16	-0.5
4,070,093	+		Sama_3439	0.16	-1.4
4,070,093	+		Sama_3439	0.16	+1.6
4,070,167	+		Sama_3439	0.20	+1.0
4,070,168	-		Sama_3439	0.20	-2.5
4,070,178	+		Sama_3439	0.20	-2.1
4,070,178	+		Sama_3439	0.20	+1.5
4,070,178	+		Sama_3439	0.20	-0.2
4,070,178	+		Sama_3439	0.20	-1.8
4,070,179	-		Sama_3439	0.20	+0.5
4,070,179	-		Sama_3439	0.20	+0.4
4,070,179	-		Sama_3439	0.20	+0.3
4,070,179	-		Sama_3439	0.20	-0.8
4,070,179	-		Sama_3439	0.20	-1.5
4,070,179	-		Sama_3439	0.20	-0.7
4,070,179	-		Sama_3439	0.20	+1.3
4,070,179	-		Sama_3439	0.20	-0.7
4,070,197	+		Sama_3439	0.21	-1.0
4,070,197	+		Sama_3439	0.21	+2.2
4,070,197	+		Sama_3439	0.21	-1.5
4,070,198	-		Sama_3439	0.21	+2.3
4,070,198	-		Sama_3439	0.21	-0.1
4,070,198	-		Sama_3439	0.21	+1.9
4,070,198	-		Sama_3439	0.21	-2.4
4,070,224	+		Sama_3439	0.22	-1.5
4,070,224	+		Sama_3439	0.22	-0.5
4,070,225	-		Sama_3439	0.22	+2.9
4,070,225	-		Sama_3439	0.22	+2.7
4,070,225	-		Sama_3439	0.22	+5.3
4,070,225	-		Sama_3439	0.22	+0.6
4,070,225	-		Sama_3439	0.22	+0.3
4,070,225	-		Sama_3439	0.22	-0.3
4,070,225	-		Sama_3439	0.22	-1.1
4,070,225	-		Sama_3439	0.22	-0.7
4,070,225	-		Sama_3439	0.22	-0.9
4,070,229	+		Sama_3439	0.22	-0.5
4,070,230	-		Sama_3439	0.22	-1.3
4,070,230	-		Sama_3439	0.22	-0.5
4,070,304	-		Sama_3439	0.26	+2.9
4,070,373	+		Sama_3439	0.29	+0.6
4,070,373	+		Sama_3439	0.29	+2.7
4,070,373	+		Sama_3439	0.29	+2.4
4,070,373	+		Sama_3439	0.29	+1.5
4,070,374	-		Sama_3439	0.29	-0.4
4,070,374	-		Sama_3439	0.29	+1.9
4,070,374	-		Sama_3439	0.29	-1.1
4,070,374	-		Sama_3439	0.29	-0.5
4,070,374	-		Sama_3439	0.29	+1.3
4,070,374	-		Sama_3439	0.29	-0.5
4,070,374	-		Sama_3439	0.29	-0.5
4,070,404	+		Sama_3439	0.30	-1.8
4,070,404	+		Sama_3439	0.30	-1.1
4,070,404	+		Sama_3439	0.30	+4.0
4,070,405	-		Sama_3439	0.30	-0.0
4,070,405	-		Sama_3439	0.30	-1.0
4,070,405	-		Sama_3439	0.30	+0.1
4,070,405	-		Sama_3439	0.30	+2.2
4,070,405	-		Sama_3439	0.30	+0.9
4,070,406	+		Sama_3439	0.30	+0.3
4,070,406	+		Sama_3439	0.30	-1.5
4,070,416	+		Sama_3439	0.31	-1.2
4,070,416	+		Sama_3439	0.31	-0.5
4,070,417	-		Sama_3439	0.31	+0.6
4,070,417	-		Sama_3439	0.31	+1.1
4,070,495	+		Sama_3439	0.34	+2.2
4,070,496	-		Sama_3439	0.34	-0.8
4,070,570	+		Sama_3439	0.38	-0.5
4,070,571	-		Sama_3439	0.38	+1.2
4,070,571	-		Sama_3439	0.38	-1.6
4,070,618	+		Sama_3439	0.40	+0.6
4,070,619	-		Sama_3439	0.40	-0.6
4,070,619	-		Sama_3439	0.40	-2.0
4,070,639	+		Sama_3439	0.41	-2.8
4,070,652	+		Sama_3439	0.41	-1.5
4,070,652	+		Sama_3439	0.41	-0.3
4,070,652	+		Sama_3439	0.41	+0.0
4,070,653	-		Sama_3439	0.41	-0.7
4,070,690	+		Sama_3439	0.43	-1.0
4,070,691	-		Sama_3439	0.43	+3.2