Strain Fitness in Shewanella amazonensis SB2B around Sama_3184

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
3,775,146	+				-1.6
3,775,147	-				-1.4
3,775,147	-				-1.4
3,775,147	-				+0.5
3,775,147	-				-1.4
3,775,147	-				-1.0
3,775,147	-				-1.8
3,775,147	-				+0.5
3,775,198	+				-1.4
3,775,198	+				+0.6
3,775,198	+				-0.5
3,775,198	+				-1.2
3,775,198	+				-0.5
3,775,198	+				-1.4
3,775,198	+				-2.0
3,775,198	+				+2.3
3,775,198	+				+2.1
3,775,198	+				+1.8
3,775,198	+				+2.1
3,775,199	-				-0.5
3,775,199	-				-0.7
3,775,199	-				-2.3
3,775,199	-				-1.5
3,775,199	-				+1.5
3,775,199	-				+0.0
3,775,199	-				+1.7
3,775,199	-				-1.3
3,775,199	-				-1.4
3,775,200	+				-0.4
3,775,200	+				+1.5
3,775,200	+				-0.7
3,775,200	+				+1.3
3,775,200	+				-3.3
3,775,200	+				-0.2
3,775,200	+				+1.0
3,775,200	+				-1.4
3,775,200	+				+1.9
3,775,200	+				-2.1
3,775,200	+				-0.5
3,775,200	+				-1.0
3,775,200	+				+0.5
3,775,201	-				-2.4
3,775,201	-				+1.4
3,775,201	-				-2.1
3,775,201	-				-0.1
3,775,201	-				+2.7
3,775,201	-				-0.9
3,775,201	-				+2.3
3,775,305	+		Sama_3183	0.27	-1.9
3,775,306	-		Sama_3183	0.28	+1.0
3,775,306	-		Sama_3183	0.28	-1.4
3,775,306	-		Sama_3183	0.28	-0.8
3,775,486	-		Sama_3183	0.59	-1.1
3,775,513	+		Sama_3183	0.64	+0.3
3,775,624	+		Sama_3183	0.83	-0.2
3,775,624	+		Sama_3183	0.83	-1.6
3,775,624	+		Sama_3183	0.83	-1.5
3,775,624	+		Sama_3183	0.83	+0.5
3,775,624	+		Sama_3183	0.83	-1.6
3,775,625	-		Sama_3183	0.83	+2.0
3,775,625	-		Sama_3183	0.83	-1.8
3,775,625	-		Sama_3183	0.83	-0.7
3,775,649	+		Sama_3183	0.87	-3.1
3,775,649	+		Sama_3183	0.87	+0.7
3,775,649	+		Sama_3183	0.87	+2.1
3,775,649	+		Sama_3183	0.87	+0.3
3,775,649	+		Sama_3183	0.87	+1.6
3,775,649	+		Sama_3183	0.87	-0.6
3,775,649	+		Sama_3183	0.87	+0.1
3,775,650	-		Sama_3183	0.87	+1.4
3,775,650	-		Sama_3183	0.87	-0.8
3,775,682	+				+1.2
3,775,769	+				-0.1
3,775,769	+				+1.2
3,775,769	+				+2.6
3,775,769	+				-0.5
3,775,769	+				-0.2
3,775,769	+				+0.8
3,775,769	+				+0.1
3,775,769	+				-0.8
3,775,770	-				-0.6
3,775,770	-				-1.0
3,775,770	-				+0.4
3,775,770	-				-2.3
3,775,770	-				+2.3
3,775,770	-				-0.4
3,775,770	-				+1.1
3,775,770	-				+1.0
3,775,826	-				-1.8
3,775,826	-				-2.3
3,775,876	-				+1.0
3,775,908	+				-1.6
3,775,908	+				+2.1
3,775,908	+				-2.2
3,775,908	+				-2.0
3,775,908	+				+0.0
3,775,908	+				-0.4
3,775,909	-				-1.2
3,775,909	-				+0.2
3,775,909	-				+0.4
3,775,909	-				+5.2
3,775,953	+				+1.3
3,775,954	-				+0.8
3,775,954	-				-1.1
3,775,971	+				-2.2
3,776,005	-				+0.2
3,776,005	-				-0.2
3,776,006	+				-1.4
3,776,007	-				-2.3
3,776,007	-				+1.0
3,776,104	-				-0.4
3,776,104	-				-0.1
3,776,104	-				+2.0
3,776,104	-				+3.0
3,776,118	-				-1.4
3,776,152	+				+2.6
3,776,152	+				-2.3
3,776,161	+				+1.0
3,776,162	-				+0.5
3,776,162	-				+1.5
3,776,162	-				-0.7
3,776,201	+		Sama_3184	0.12	-0.2
3,776,201	+		Sama_3184	0.12	-0.2
3,776,202	-		Sama_3184	0.12	-1.8
3,776,202	-		Sama_3184	0.12	+1.7
3,776,202	-		Sama_3184	0.12	-1.6
3,776,213	+		Sama_3184	0.15	+0.3
3,776,213	+		Sama_3184	0.15	-1.2
3,776,213	+		Sama_3184	0.15	+0.2
3,776,214	-		Sama_3184	0.15	+0.5
3,776,235	+		Sama_3184	0.19	-1.4
3,776,236	-		Sama_3184	0.19	+0.2
3,776,236	-		Sama_3184	0.19	+2.5
3,776,255	+		Sama_3184	0.23	-0.4
3,776,255	+		Sama_3184	0.23	+2.1
3,776,255	+		Sama_3184	0.23	+0.7
3,776,255	+		Sama_3184	0.23	+4.2
3,776,256	-		Sama_3184	0.24	-0.9
3,776,439	+		Sama_3184	0.61	+2.7
3,776,439	+		Sama_3184	0.61	-1.4
3,776,440	-		Sama_3184	0.61	+0.5
3,776,440	-		Sama_3184	0.61	+0.8
3,776,468	+		Sama_3184	0.67	+2.8
3,776,468	+		Sama_3184	0.67	+0.7
3,776,469	-		Sama_3184	0.67	-1.1
3,776,469	-		Sama_3184	0.67	+0.2
3,776,469	-		Sama_3184	0.67	-0.2
3,776,469	-		Sama_3184	0.67	-1.8
3,776,469	-		Sama_3184	0.67	-0.6
3,776,469	-		Sama_3184	0.67	+1.5
3,776,502	+		Sama_3184	0.74	-1.4
3,776,502	+		Sama_3184	0.74	+4.0
3,776,502	+		Sama_3184	0.74	-0.6
3,776,502	+		Sama_3184	0.74	+4.3
3,776,502	+		Sama_3184	0.74	-1.0
3,776,502	+		Sama_3184	0.74	+3.6
3,776,502	+		Sama_3184	0.74	-1.2
3,776,503	-		Sama_3184	0.74	-1.3
3,776,503	-		Sama_3184	0.74	+0.2
3,776,503	-		Sama_3184	0.74	-1.0
3,776,503	-		Sama_3184	0.74	+1.5
3,776,503	-		Sama_3184	0.74	-0.4
3,776,503	-		Sama_3184	0.74	+0.5
3,776,572	+		Sama_3184	0.88	-2.6
3,776,572	+		Sama_3184	0.88	+1.6
3,776,582	-				+3.9
3,776,601	-				-1.9
3,776,662	+				+2.1
3,776,662	+				-0.8
3,776,662	+				+4.3
3,776,663	-				-1.4
3,776,663	-				+1.5
3,776,663	-				+3.7
3,776,663	-				-0.2
3,776,663	-				-1.3
3,776,663	-				+3.5
3,776,663	-				-0.5
3,776,663	-				-1.8
3,776,664	+				+0.5
3,776,665	-				-1.0
3,776,665	-				+0.2
3,776,665	-				+2.1
3,776,683	+				-0.8
3,776,683	+				-1.0
3,776,683	+				+1.9
3,776,684	-				-0.1
3,776,684	-				-1.4
3,776,701	-				+1.1
3,776,728	-				-0.5
3,776,737	-				+2.1
3,776,835	-				+0.2
3,776,852	-				+1.0
3,776,872	+				-1.0
3,776,873	-				-0.2
3,777,021	-		Sama_3185	0.17	+1.7
3,777,047	+		Sama_3185	0.20	+1.8
3,777,047	+		Sama_3185	0.20	+0.1
3,777,047	+		Sama_3185	0.20	-1.8
3,777,048	-		Sama_3185	0.20	+1.1
3,777,048	-		Sama_3185	0.20	-1.9
3,777,048	-		Sama_3185	0.20	-1.4
3,777,054	+		Sama_3185	0.20	+2.1
3,777,054	+		Sama_3185	0.20	-0.1
3,777,054	+		Sama_3185	0.20	+4.4
3,777,054	+		Sama_3185	0.20	+1.2
3,777,055	-		Sama_3185	0.20	-0.5
3,777,072	+		Sama_3185	0.22	-0.8
3,777,072	+		Sama_3185	0.22	+0.6
3,777,072	+		Sama_3185	0.22	-0.3
3,777,072	+		Sama_3185	0.22	-0.2
3,777,073	-		Sama_3185	0.22	-2.0
3,777,073	-		Sama_3185	0.22	-0.1
3,777,073	-		Sama_3185	0.22	+1.9
3,777,073	-		Sama_3185	0.22	+0.9
3,777,119	+		Sama_3185	0.26	+0.2
3,777,120	-		Sama_3185	0.27	+1.0
3,777,123	+		Sama_3185	0.27	-2.2
3,777,219	+		Sama_3185	0.36	-0.6
3,777,220	-		Sama_3185	0.36	+0.1
3,777,220	-		Sama_3185	0.36	-2.4
3,777,220	-		Sama_3185	0.36	-0.0
3,777,220	-		Sama_3185	0.36	-0.7
3,777,220	-		Sama_3185	0.36	-2.2
3,777,223	+		Sama_3185	0.36	-1.4
3,777,223	+		Sama_3185	0.36	-2.2
3,777,223	+		Sama_3185	0.36	-0.9
3,777,223	+		Sama_3185	0.36	-2.2
3,777,223	+		Sama_3185	0.36	-0.5
3,777,223	+		Sama_3185	0.36	+5.1
3,777,223	+		Sama_3185	0.36	-0.2
3,777,223	+		Sama_3185	0.36	-2.1
3,777,224	-		Sama_3185	0.36	-1.3
3,777,224	-		Sama_3185	0.36	-0.6
3,777,224	-		Sama_3185	0.36	+1.1
3,777,224	-		Sama_3185	0.36	+0.0
3,777,224	-		Sama_3185	0.36	-0.4
3,777,224	-		Sama_3185	0.36	+3.1
3,777,224	-		Sama_3185	0.36	+1.7
3,777,224	-		Sama_3185	0.36	+0.3
3,777,224	-		Sama_3185	0.36	+1.5
3,777,224	-		Sama_3185	0.36	-0.6
3,777,265	+		Sama_3185	0.40	-0.4
3,777,265	+		Sama_3185	0.40	-0.5
3,777,265	+		Sama_3185	0.40	+0.5
3,777,265	+		Sama_3185	0.40	-1.1
3,777,266	-		Sama_3185	0.40	+0.8
3,777,266	-		Sama_3185	0.40	-1.2
3,777,298	-		Sama_3185	0.43	-1.5
3,777,349	+		Sama_3185	0.48	+0.8
3,777,349	+		Sama_3185	0.48	+2.0
3,777,459	+		Sama_3185	0.58	-3.1
3,777,489	+		Sama_3185	0.61	-0.5
3,777,528	+		Sama_3185	0.64	-1.5
3,777,528	+		Sama_3185	0.64	-1.9
3,777,528	+		Sama_3185	0.64	-0.2
3,777,528	+		Sama_3185	0.64	+0.2
3,777,528	+		Sama_3185	0.64	+0.4
3,777,528	+		Sama_3185	0.64	+0.3
3,777,528	+		Sama_3185	0.64	+2.1
3,777,529	-		Sama_3185	0.64	-1.2
3,777,529	-		Sama_3185	0.64	-0.1
3,777,529	-		Sama_3185	0.64	-1.2
3,777,529	-		Sama_3185	0.64	-1.4
3,777,531	+		Sama_3185	0.64	+0.5
3,777,531	+		Sama_3185	0.64	-0.8
3,777,531	+		Sama_3185	0.64	+3.5
3,777,531	+		Sama_3185	0.64	-1.0
3,777,531	+		Sama_3185	0.64	+2.6
3,777,531	+		Sama_3185	0.64	+2.0
3,777,531	+		Sama_3185	0.64	-2.1
3,777,531	+		Sama_3185	0.64	-0.8
3,777,532	-		Sama_3185	0.65	-0.6
3,777,532	-		Sama_3185	0.65	-1.0
3,777,532	-		Sama_3185	0.65	+0.2
3,777,532	-		Sama_3185	0.65	+2.6
3,777,532	-		Sama_3185	0.65	-0.2
3,777,532	-		Sama_3185	0.65	+0.0
3,777,532	-		Sama_3185	0.65	+0.0
3,777,532	-		Sama_3185	0.65	+1.5