Strain Fitness in Shewanella amazonensis SB2B around Sama_3122

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
3,701,296	-		Sama_3121	0.30	-1.4
3,701,316	-		Sama_3121	0.32	+0.2
3,701,335	+		Sama_3121	0.33	-0.8
3,701,377	+		Sama_3121	0.37	+0.7
3,701,380	-		Sama_3121	0.37	-2.8
3,701,380	-		Sama_3121	0.37	+2.8
3,701,384	+		Sama_3121	0.37	-1.7
3,701,394	-		Sama_3121	0.38	-0.5
3,701,401	-		Sama_3121	0.38	+1.5
3,701,451	+		Sama_3121	0.42	-0.8
3,701,451	+		Sama_3121	0.42	+4.1
3,701,508	+		Sama_3121	0.47	-1.6
3,701,535	+		Sama_3121	0.49	-2.7
3,701,589	-		Sama_3121	0.53	-0.9
3,701,612	+		Sama_3121	0.55	+0.1
3,701,642	-		Sama_3121	0.57	+1.8
3,701,672	+		Sama_3121	0.59	+0.6
3,701,703	-		Sama_3121	0.61	+1.8
3,701,721	+		Sama_3121	0.63	+1.8
3,701,760	+		Sama_3121	0.66	+1.5
3,701,963	-		Sama_3121	0.81	-0.1
3,702,076	-		Sama_3121	0.90	+1.8
3,702,130	+				+0.2
3,702,130	+				+2.2
3,702,186	-				+3.1
3,702,206	-				-1.4
3,702,208	+				+0.9
3,702,223	+				-0.0
3,702,261	-				+1.9
3,702,303	+				-1.7
3,702,304	-				+0.6
3,702,307	+				+1.1
3,702,366	+		Sama_3122	0.14	+1.7
3,702,367	-		Sama_3122	0.14	+0.8
3,702,371	-		Sama_3122	0.15	-0.1
3,702,399	-		Sama_3122	0.19	-0.0
3,702,442	+		Sama_3122	0.25	-0.8
3,702,467	+		Sama_3122	0.29	-1.9
3,702,480	+		Sama_3122	0.31	+0.3
3,702,480	+		Sama_3122	0.31	+2.5
3,702,484	+		Sama_3122	0.31	+1.1
3,702,484	+		Sama_3122	0.31	+2.1
3,702,484	+		Sama_3122	0.31	-1.0
3,702,484	+		Sama_3122	0.31	-3.0
3,702,484	+		Sama_3122	0.31	-1.5
3,702,484	+		Sama_3122	0.31	+0.8
3,702,484	+		Sama_3122	0.31	-2.3
3,702,484	+		Sama_3122	0.31	+2.1
3,702,485	-		Sama_3122	0.31	+0.9
3,702,485	-		Sama_3122	0.31	+4.2
3,702,485	-		Sama_3122	0.31	+2.5
3,702,485	-		Sama_3122	0.31	+1.2
3,702,485	-		Sama_3122	0.31	+3.8
3,702,530	+		Sama_3122	0.38	+1.6
3,702,538	+		Sama_3122	0.39	+1.7
3,702,538	+		Sama_3122	0.39	-1.2
3,702,542	+		Sama_3122	0.40	-2.2
3,702,542	+		Sama_3122	0.40	+2.4
3,702,553	+		Sama_3122	0.41	-0.0
3,702,553	+		Sama_3122	0.41	-1.9
3,702,603	-		Sama_3122	0.48	-0.7
3,702,604	+		Sama_3122	0.48	-1.8
3,702,604	+		Sama_3122	0.48	+1.1
3,702,604	+		Sama_3122	0.48	+0.3
3,702,625	+		Sama_3122	0.51	-2.2
3,702,625	+		Sama_3122	0.51	-0.5
3,702,689	-		Sama_3122	0.61	+0.2
3,702,698	+		Sama_3122	0.62	-2.9
3,702,698	+		Sama_3122	0.62	-3.4
3,702,698	+		Sama_3122	0.62	+0.8
3,702,702	-		Sama_3122	0.62	+3.8
3,702,712	+		Sama_3122	0.64	+1.0
3,702,712	+		Sama_3122	0.64	+3.0
3,702,712	+		Sama_3122	0.64	+2.9
3,702,712	+		Sama_3122	0.64	-2.1
3,702,712	+		Sama_3122	0.64	-0.5
3,702,713	-		Sama_3122	0.64	-0.8
3,702,713	-		Sama_3122	0.64	-1.8
3,702,713	-		Sama_3122	0.64	+0.8
3,702,735	-		Sama_3122	0.67	-0.1
3,702,774	+		Sama_3122	0.73	-1.0
3,702,774	+		Sama_3122	0.73	+0.2
3,702,774	+		Sama_3122	0.73	+4.5
3,702,774	+		Sama_3122	0.73	+0.8
3,702,775	-		Sama_3122	0.73	+1.6
3,702,780	+		Sama_3122	0.74	+2.8
3,702,780	+		Sama_3122	0.74	-0.2
3,702,780	+		Sama_3122	0.74	+0.2
3,702,780	+		Sama_3122	0.74	-0.2
3,702,781	-		Sama_3122	0.74	-1.0
3,702,781	-		Sama_3122	0.74	+0.8
3,702,781	-		Sama_3122	0.74	-1.9
3,702,781	-		Sama_3122	0.74	+0.6
3,702,798	+		Sama_3122	0.76	-2.1
3,702,798	+		Sama_3122	0.76	-0.6
3,702,810	+		Sama_3122	0.78	+2.8
3,702,843	+		Sama_3122	0.83	-0.4
3,702,856	+		Sama_3122	0.85	-0.4
3,702,856	+		Sama_3122	0.85	-1.0
3,702,856	+		Sama_3122	0.85	-1.0
3,702,856	+		Sama_3122	0.85	-1.2
3,702,857	-		Sama_3122	0.85	-1.8
3,702,902	+				+0.7
3,702,902	+				+2.3
3,702,903	-				-0.2
3,702,903	-				-1.7
3,702,917	+				-0.4
3,702,917	+				+2.3
3,702,918	-				-1.0
3,702,918	-				+1.4
3,702,922	+				-0.4
3,702,923	-				-1.7
3,702,940	+				-3.0
3,702,985	-				+3.2
3,702,999	+				+1.3
3,702,999	+				-2.1
3,702,999	+				-0.6
3,702,999	+				+1.3
3,702,999	+				-1.4
3,702,999	+				+2.4
3,703,016	+				-0.5
3,703,094	+				-0.9
3,703,119	-				-0.5
3,703,187	-				-0.2
3,703,212	+				+2.2
3,703,266	+				-0.5
3,703,296	+		Sama_3123	0.11	+1.1
3,703,296	+		Sama_3123	0.11	-1.0
3,703,297	-		Sama_3123	0.11	-0.5
3,703,297	-		Sama_3123	0.11	+0.6
3,703,316	-		Sama_3123	0.13	-0.2
3,703,351	-		Sama_3123	0.18	-0.6
3,703,410	+		Sama_3123	0.26	-0.0
3,703,424	-		Sama_3123	0.28	+0.8
3,703,455	+		Sama_3123	0.32	-1.3
3,703,477	-		Sama_3123	0.35	+0.3
3,703,653	+		Sama_3123	0.58	+2.4
3,703,655	+		Sama_3123	0.58	-1.0
3,703,655	+		Sama_3123	0.58	+1.9
3,703,655	+		Sama_3123	0.58	+0.8
3,703,655	+		Sama_3123	0.58	+3.6
3,703,655	+		Sama_3123	0.58	-0.8
3,703,658	+		Sama_3123	0.59	+2.2
3,703,658	+		Sama_3123	0.59	-0.3
3,703,658	+		Sama_3123	0.59	+0.1
3,703,678	+		Sama_3123	0.61	-0.2
3,703,679	-		Sama_3123	0.62	+0.3
3,703,792	-		Sama_3123	0.77	-1.1
3,703,821	+		Sama_3123	0.81	-1.0
3,703,852	+		Sama_3123	0.85	-0.5
3,703,857	+		Sama_3123	0.85	-2.7
3,703,901	-				+0.4
3,703,926	-				+1.0