Strain Fitness in Shewanella amazonensis SB2B around Sama_2999

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
3,571,930	-		Sama_2998	0.45	-1.2
3,571,930	-		Sama_2998	0.45	+1.4
3,571,957	+		Sama_2998	0.47	+2.5
3,571,970	-		Sama_2998	0.48	-0.9
3,571,978	-		Sama_2998	0.48	-1.9
3,572,061	+		Sama_2998	0.53	-1.2
3,572,061	+		Sama_2998	0.53	+0.7
3,572,061	+		Sama_2998	0.53	-0.4
3,572,061	+		Sama_2998	0.53	-1.5
3,572,061	+		Sama_2998	0.53	-1.6
3,572,061	+		Sama_2998	0.53	-1.0
3,572,061	+		Sama_2998	0.53	-0.4
3,572,061	+		Sama_2998	0.53	-1.6
3,572,061	+		Sama_2998	0.53	-1.1
3,572,062	-		Sama_2998	0.53	+0.1
3,572,062	-		Sama_2998	0.53	-0.4
3,572,062	-		Sama_2998	0.53	-1.5
3,572,063	+		Sama_2998	0.53	+0.5
3,572,063	+		Sama_2998	0.53	-0.7
3,572,063	+		Sama_2998	0.53	+0.6
3,572,063	+		Sama_2998	0.53	-0.4
3,572,063	+		Sama_2998	0.53	-0.4
3,572,063	+		Sama_2998	0.53	-0.8
3,572,064	-		Sama_2998	0.53	+0.2
3,572,064	-		Sama_2998	0.53	-0.8
3,572,064	-		Sama_2998	0.53	-0.7
3,572,064	-		Sama_2998	0.53	+1.2
3,572,064	-		Sama_2998	0.53	-0.1
3,572,064	-		Sama_2998	0.53	-1.7
3,572,161	+		Sama_2998	0.59	+0.4
3,572,161	+		Sama_2998	0.59	-2.0
3,572,161	+		Sama_2998	0.59	-1.6
3,572,162	-		Sama_2998	0.59	-2.2
3,572,220	+		Sama_2998	0.62	-0.3
3,572,220	+		Sama_2998	0.62	-0.5
3,572,221	-		Sama_2998	0.62	+0.2
3,572,273	+		Sama_2998	0.65	+1.4
3,572,274	-		Sama_2998	0.66	-2.1
3,572,302	-		Sama_2998	0.67	-0.1
3,572,302	-		Sama_2998	0.67	+1.9
3,572,310	+		Sama_2998	0.68	-0.3
3,572,310	+		Sama_2998	0.68	-2.0
3,572,311	-		Sama_2998	0.68	-1.8
3,572,311	-		Sama_2998	0.68	-1.0
3,572,318	+		Sama_2998	0.68	+1.7
3,572,318	+		Sama_2998	0.68	+2.3
3,572,318	+		Sama_2998	0.68	-1.4
3,572,361	+		Sama_2998	0.71	-2.0
3,572,361	+		Sama_2998	0.71	-0.5
3,572,361	+		Sama_2998	0.71	-0.4
3,572,361	+		Sama_2998	0.71	-1.8
3,572,361	+		Sama_2998	0.71	-0.9
3,572,361	+		Sama_2998	0.71	+3.8
3,572,362	-		Sama_2998	0.71	-0.2
3,572,367	+		Sama_2998	0.71	-1.7
3,572,499	+		Sama_2998	0.79	-2.6
3,572,499	+		Sama_2998	0.79	-2.6
3,572,499	+		Sama_2998	0.79	+1.0
3,572,499	+		Sama_2998	0.79	-3.0
3,572,499	+		Sama_2998	0.79	+0.2
3,572,499	+		Sama_2998	0.79	-0.2
3,572,499	+		Sama_2998	0.79	+2.3
3,572,499	+		Sama_2998	0.79	-0.7
3,572,500	-		Sama_2998	0.79	+0.1
3,572,500	-		Sama_2998	0.79	-2.5
3,572,500	-		Sama_2998	0.79	-2.7
3,572,500	-		Sama_2998	0.79	+3.7
3,572,500	-		Sama_2998	0.79	+0.5
3,572,503	+		Sama_2998	0.79	-0.5
3,572,504	-		Sama_2998	0.79	-1.5
3,572,504	-		Sama_2998	0.79	+0.9
3,572,522	-		Sama_2998	0.80	+0.5
3,572,522	-		Sama_2998	0.80	-1.8
3,572,559	+		Sama_2998	0.82	-0.2
3,572,559	+		Sama_2998	0.82	-1.1
3,572,559	+		Sama_2998	0.82	-0.9
3,572,560	-		Sama_2998	0.82	-1.2
3,572,560	-		Sama_2998	0.82	-0.2
3,572,560	-		Sama_2998	0.82	-2.0
3,572,560	-		Sama_2998	0.82	+0.0
3,572,563	+		Sama_2998	0.83	-0.2
3,572,564	-		Sama_2998	0.83	-0.4
3,572,564	-		Sama_2998	0.83	+2.2
3,572,564	-		Sama_2998	0.83	-0.8
3,572,775	+				+0.8
3,572,776	-				+0.2
3,572,789	+				-0.0
3,572,789	+				-0.2
3,572,790	-				-0.9
3,572,834	+				-1.3
3,572,834	+				+1.1
3,572,834	+				-1.4
3,572,834	+				+2.7
3,572,835	-				+0.2
3,572,835	-				-1.4
3,572,835	-				-0.5
3,572,838	+				-0.5
3,572,839	-				-0.9
3,572,839	-				-2.0
3,572,839	-				-2.0
3,572,839	-				-2.2
3,572,839	-				-1.2
3,572,867	+				-1.7
3,572,867	+				+0.6
3,572,867	+				-0.3
3,572,868	-				-1.4
3,572,900	+				+1.7
3,572,900	+				+0.2
3,572,933	+		Sama_2999	0.13	+0.2
3,572,933	+		Sama_2999	0.13	-1.5
3,572,948	-		Sama_2999	0.16	-0.1
3,572,969	+		Sama_2999	0.20	-1.7
3,572,969	+		Sama_2999	0.20	-0.5
3,572,969	+		Sama_2999	0.20	-1.0
3,572,969	+		Sama_2999	0.20	+3.6
3,572,969	+		Sama_2999	0.20	-0.5
3,572,970	-		Sama_2999	0.20	+0.5
3,572,970	-		Sama_2999	0.20	+0.2
3,572,970	-		Sama_2999	0.20	+0.8
3,572,970	-		Sama_2999	0.20	-0.3
3,572,970	-		Sama_2999	0.20	-1.7
3,572,970	-		Sama_2999	0.20	+0.2
3,572,970	-		Sama_2999	0.20	-1.1
3,573,079	+		Sama_2999	0.42	-1.3
3,573,156	+		Sama_2999	0.57	-1.7
3,573,274	-		Sama_2999	0.80	-2.9
3,573,274	-		Sama_2999	0.80	+3.6
3,573,274	-		Sama_2999	0.80	-0.5
3,573,308	+		Sama_2999	0.86	+3.1
3,573,309	-		Sama_2999	0.86	-3.4
3,573,372	+				+0.2
3,573,372	+				-1.4
3,573,373	-				+2.9
3,573,373	-				+0.5
3,573,373	-				+1.9
3,573,443	+				-1.0
3,573,443	+				+0.2
3,573,444	-				+2.1
3,573,444	-				+1.2
3,573,498	+				-0.9
3,573,498	+				-1.4
3,573,498	+				+2.0
3,573,498	+				+1.4
3,573,498	+				+1.4
3,573,499	-				-1.0
3,573,499	-				-0.5
3,573,499	-				-0.3
3,573,500	+				-1.5
3,573,500	+				+1.8
3,573,500	+				+0.2
3,573,501	-				-0.6
3,573,501	-				-1.9
3,573,501	-				+0.9
3,573,501	-				+1.7
3,573,513	+				-2.0
3,573,519	+				-2.8
3,573,519	+				+0.5
3,573,520	-				-1.5
3,573,598	+				+0.1
3,573,598	+				-1.0
3,573,598	+				-1.0
3,573,598	+				+1.2
3,573,598	+				-0.4
3,573,598	+				-0.0
3,573,598	+				-1.3
3,573,599	-				-0.9
3,573,599	-				+0.5
3,573,599	-				-1.0
3,573,599	-				-1.6
3,573,599	-				+2.0
3,573,599	-				-2.1
3,573,599	-				-0.2
3,573,599	-				+0.2
3,573,599	-				-1.7
3,573,599	-				+1.8
3,573,784	+		Sama_3000	0.24	-2.2
3,573,784	+		Sama_3000	0.24	+0.9
3,573,784	+		Sama_3000	0.24	-0.7
3,573,784	+		Sama_3000	0.24	-2.1
3,573,784	+		Sama_3000	0.24	-2.1
3,573,784	+		Sama_3000	0.24	-2.5
3,573,784	+		Sama_3000	0.24	-0.2
3,573,784	+		Sama_3000	0.24	+0.6
3,573,785	-		Sama_3000	0.24	-1.6
3,573,785	-		Sama_3000	0.24	+3.0
3,573,785	-		Sama_3000	0.24	+0.8
3,573,785	-		Sama_3000	0.24	-1.7
3,573,785	-		Sama_3000	0.24	-0.1
3,573,785	-		Sama_3000	0.24	-0.7
3,573,785	-		Sama_3000	0.24	+4.8
3,573,785	-		Sama_3000	0.24	+2.1
3,573,852	-		Sama_3000	0.31	-0.2
3,573,871	-		Sama_3000	0.33	+1.8
3,573,871	-		Sama_3000	0.33	-1.8
3,574,010	+		Sama_3000	0.47	-1.5
3,574,098	+		Sama_3000	0.56	-0.2
3,574,098	+		Sama_3000	0.56	-0.5
3,574,098	+		Sama_3000	0.56	+2.0
3,574,098	+		Sama_3000	0.56	+1.4
3,574,099	-		Sama_3000	0.56	-0.5
3,574,099	-		Sama_3000	0.56	-1.0
3,574,099	-		Sama_3000	0.56	+3.7
3,574,099	-		Sama_3000	0.56	-1.4
3,574,099	-		Sama_3000	0.56	-0.2
3,574,107	+		Sama_3000	0.57	-0.3
3,574,107	+		Sama_3000	0.57	-0.4
3,574,107	+		Sama_3000	0.57	-1.6
3,574,107	+		Sama_3000	0.57	+1.8
3,574,107	+		Sama_3000	0.57	-0.4
3,574,107	+		Sama_3000	0.57	-2.5
3,574,108	-		Sama_3000	0.57	-0.5
3,574,108	-		Sama_3000	0.57	+2.5
3,574,108	-		Sama_3000	0.57	-0.4
3,574,215	+		Sama_3000	0.68	+0.2
3,574,215	+		Sama_3000	0.68	-2.7
3,574,216	-		Sama_3000	0.68	-0.8
3,574,273	-		Sama_3000	0.74	-0.6
3,574,273	-		Sama_3000	0.74	+1.8
3,574,273	-		Sama_3000	0.74	-0.8
3,574,273	-		Sama_3000	0.74	+0.2
3,574,273	-		Sama_3000	0.74	+2.8
3,574,273	-		Sama_3000	0.74	-1.4
3,574,275	+		Sama_3000	0.74	-1.7
3,574,275	+		Sama_3000	0.74	-2.2
3,574,275	+		Sama_3000	0.74	+2.3
3,574,275	+		Sama_3000	0.74	+0.4
3,574,275	+		Sama_3000	0.74	+1.4
3,574,275	+		Sama_3000	0.74	-0.3
3,574,276	-		Sama_3000	0.74	-0.8
3,574,276	-		Sama_3000	0.74	-1.6
3,574,276	-		Sama_3000	0.74	+0.3
3,574,276	-		Sama_3000	0.74	-0.2
3,574,276	-		Sama_3000	0.74	+1.8
3,574,276	-		Sama_3000	0.74	-0.5
3,574,276	-		Sama_3000	0.74	-1.7
3,574,276	-		Sama_3000	0.74	-0.5
3,574,276	-		Sama_3000	0.74	+0.2
3,574,310	+		Sama_3000	0.78	-1.2
3,574,310	+		Sama_3000	0.78	-3.4
3,574,310	+		Sama_3000	0.78	-0.8
3,574,310	+		Sama_3000	0.78	+2.6
3,574,310	+		Sama_3000	0.78	-1.5
3,574,310	+		Sama_3000	0.78	-0.5
3,574,310	+		Sama_3000	0.78	-1.9
3,574,310	+		Sama_3000	0.78	+2.7
3,574,310	+		Sama_3000	0.78	-0.0
3,574,310	+		Sama_3000	0.78	-1.9
3,574,311	-		Sama_3000	0.78	+0.2
3,574,311	-		Sama_3000	0.78	-1.8
3,574,330	+		Sama_3000	0.80	-0.4
3,574,330	+		Sama_3000	0.80	-2.2
3,574,355	+		Sama_3000	0.82	-2.0
3,574,355	+		Sama_3000	0.82	-0.7
3,574,355	+		Sama_3000	0.82	-0.7
3,574,356	-		Sama_3000	0.82	+1.2