Strain Fitness in Shewanella amazonensis SB2B around Sama_2992

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
3,564,041	+				-2.4
3,564,042	-				+0.7
3,564,042	-				-2.6
3,564,095	-				-0.1
3,564,111	+				+0.2
3,564,111	+				+0.8
3,564,111	+				+0.2
3,564,128	+				+1.7
3,564,128	+				-1.6
3,564,128	+				-3.5
3,564,129	-				-2.0
3,564,178	+				-1.4
3,564,249	+				-1.2
3,564,249	+				-0.8
3,564,249	+				-0.5
3,564,249	+				+2.7
3,564,249	+				+2.3
3,564,249	+				+1.1
3,564,249	+				+1.4
3,564,249	+				-0.5
3,564,249	+				+2.7
3,564,249	+				+2.6
3,564,249	+				-1.3
3,564,250	-				-2.3
3,564,250	-				-1.3
3,564,250	-				-0.8
3,564,250	-				-0.9
3,564,252	+				+3.4
3,564,252	+				+0.8
3,564,252	+				+0.8
3,564,253	-				-1.7
3,564,253	-				-1.6
3,564,290	+				-0.0
3,564,291	-				+3.2
3,564,291	-				-2.0
3,564,352	+				+2.1
3,564,382	+				-1.6
3,564,382	+				+4.5
3,564,382	+				-0.7
3,564,382	+				+1.6
3,564,383	-				+0.2
3,564,396	+				+0.2
3,564,397	-				-1.7
3,564,469	+				+1.6
3,564,469	+				-0.2
3,564,469	+				-0.0
3,564,469	+				-0.7
3,564,469	+				+1.2
3,564,469	+				-1.0
3,564,469	+				-0.9
3,564,469	+				+3.3
3,564,469	+				-0.2
3,564,469	+				-0.2
3,564,469	+				+2.4
3,564,470	-				-0.5
3,564,470	-				-0.8
3,564,470	-				+0.4
3,564,470	-				+0.0
3,564,470	-				-0.1
3,564,470	-				+0.4
3,564,471	+				-0.8
3,564,471	+				-2.2
3,564,471	+				+1.0
3,564,471	+				-0.3
3,564,471	+				-1.8
3,564,471	+				-0.4
3,564,472	-				-0.2
3,564,472	-				-1.3
3,564,472	-				+0.4
3,564,630	-				-1.6
3,564,632	+				+0.8
3,564,632	+				+0.5
3,564,648	+				+3.9
3,564,649	-				+0.8
3,564,649	-				-1.8
3,564,678	+		Sama_2991	0.17	+2.3
3,564,678	+		Sama_2991	0.17	-1.4
3,564,678	+		Sama_2991	0.17	-0.8
3,564,678	+		Sama_2991	0.17	-1.7
3,564,678	+		Sama_2991	0.17	+0.5
3,564,678	+		Sama_2991	0.17	+0.6
3,564,678	+		Sama_2991	0.17	-0.3
3,564,678	+		Sama_2991	0.17	-0.8
3,564,678	+		Sama_2991	0.17	+4.9
3,564,678	+		Sama_2991	0.17	-0.1
3,564,678	+		Sama_2991	0.17	+2.6
3,564,678	+		Sama_2991	0.17	-1.2
3,564,679	-		Sama_2991	0.17	-1.0
3,564,679	-		Sama_2991	0.17	-1.2
3,564,679	-		Sama_2991	0.17	-0.2
3,564,679	-		Sama_2991	0.17	-1.1
3,564,679	-		Sama_2991	0.17	+1.4
3,564,759	+		Sama_2991	0.38	+0.4
3,564,759	+		Sama_2991	0.38	-0.2
3,564,759	+		Sama_2991	0.38	+1.3
3,564,759	+		Sama_2991	0.38	-2.3
3,564,759	+		Sama_2991	0.38	-0.0
3,564,759	+		Sama_2991	0.38	+0.8
3,564,759	+		Sama_2991	0.38	-2.7
3,564,760	-		Sama_2991	0.38	-0.8
3,564,760	-		Sama_2991	0.38	+0.4
3,564,760	-		Sama_2991	0.38	-2.1
3,564,760	-		Sama_2991	0.38	+2.0
3,564,760	-		Sama_2991	0.38	-0.9
3,564,808	+		Sama_2991	0.51	-0.1
3,564,809	-		Sama_2991	0.51	-0.2
3,564,873	+		Sama_2991	0.68	-1.2
3,564,874	-		Sama_2991	0.69	-0.1
3,564,901	+		Sama_2991	0.76	+2.8
3,564,901	+		Sama_2991	0.76	-1.4
3,564,901	+		Sama_2991	0.76	-2.5
3,564,901	+		Sama_2991	0.76	+0.8
3,564,901	+		Sama_2991	0.76	-2.5
3,564,902	-		Sama_2991	0.76	-1.0
3,564,902	-		Sama_2991	0.76	-2.4
3,564,902	-		Sama_2991	0.76	-2.4
3,564,902	-		Sama_2991	0.76	-0.2
3,564,902	-		Sama_2991	0.76	-1.8
3,564,902	-		Sama_2991	0.76	-0.2
3,564,902	-		Sama_2991	0.76	-2.8
3,564,902	-		Sama_2991	0.76	+0.8
3,564,902	-		Sama_2991	0.76	-0.2
3,564,929	+		Sama_2991	0.83	-2.2
3,564,929	+		Sama_2991	0.83	+1.9
3,564,930	-		Sama_2991	0.83	-1.2
3,564,930	-		Sama_2991	0.83	-3.1
3,564,930	-		Sama_2991	0.83	+2.3
3,564,930	-		Sama_2991	0.83	-1.9
3,564,930	-		Sama_2991	0.83	+0.5
3,564,930	-		Sama_2991	0.83	-0.8
3,564,934	+		Sama_2991	0.84	-1.1
3,564,934	+		Sama_2991	0.84	-1.0
3,564,935	-		Sama_2991	0.85	-0.3
3,564,953	+		Sama_2991	0.89	-2.2
3,564,953	+		Sama_2991	0.89	-1.1
3,564,953	+		Sama_2991	0.89	-0.9
3,564,953	+		Sama_2991	0.89	+1.6
3,564,954	-		Sama_2991	0.90	-1.2
3,564,954	-		Sama_2991	0.90	-1.2
3,564,954	-		Sama_2991	0.90	-1.5
3,564,954	-		Sama_2991	0.90	-1.8
3,564,954	-		Sama_2991	0.90	+1.0
3,564,954	-		Sama_2991	0.90	+3.9
3,564,971	-				-0.5
3,565,015	+				-0.7
3,565,015	+				+1.2
3,565,015	+				-1.4
3,565,016	-				+0.6
3,565,016	-				+2.2
3,565,016	-				+0.3
3,565,016	-				+0.9
3,565,016	-				-0.4
3,565,016	-				-1.8
3,565,016	-				+3.0
3,565,016	-				+0.1
3,565,016	-				+2.5
3,565,016	-				-1.2
3,565,016	-				-0.9
3,565,016	-				-1.0
3,565,016	-				-0.0
3,565,016	-				-0.6
3,565,021	+				+2.0
3,565,021	+				+1.5
3,565,021	+				+2.7
3,565,021	+				-0.5
3,565,021	+				-1.5
3,565,021	+				-0.2
3,565,021	+				-1.2
3,565,022	-				-1.0
3,565,022	-				+1.2
3,565,092	+				-2.1
3,565,092	+				-0.5
3,565,093	-				-2.0
3,565,111	+				-0.5
3,565,112	-				+1.6
3,565,112	-				+0.8
3,565,154	-	mltA	Sama_2992	0.10	+0.2
3,565,239	+	mltA	Sama_2992	0.18	-1.9
3,565,239	+	mltA	Sama_2992	0.18	-0.0
3,565,239	+	mltA	Sama_2992	0.18	-1.4
3,565,240	-	mltA	Sama_2992	0.18	-0.5
3,565,334	+	mltA	Sama_2992	0.26	+3.0
3,565,335	-	mltA	Sama_2992	0.26	-0.3
3,565,506	-	mltA	Sama_2992	0.42	-0.9
3,565,509	+	mltA	Sama_2992	0.42	-1.7
3,565,509	+	mltA	Sama_2992	0.42	-2.4
3,565,509	+	mltA	Sama_2992	0.42	+0.6
3,565,509	+	mltA	Sama_2992	0.42	+2.7
3,565,509	+	mltA	Sama_2992	0.42	-1.6
3,565,509	+	mltA	Sama_2992	0.42	+2.5
3,565,509	+	mltA	Sama_2992	0.42	+1.8
3,565,509	+	mltA	Sama_2992	0.42	-0.8
3,565,510	-	mltA	Sama_2992	0.42	+0.8
3,565,544	-	mltA	Sama_2992	0.45	+0.8
3,565,544	-	mltA	Sama_2992	0.45	-1.9
3,565,552	+	mltA	Sama_2992	0.46	+0.1
3,565,552	+	mltA	Sama_2992	0.46	-1.4
3,565,552	+	mltA	Sama_2992	0.46	+1.4
3,565,552	+	mltA	Sama_2992	0.46	+3.8
3,565,553	-	mltA	Sama_2992	0.46	+4.8
3,565,568	+	mltA	Sama_2992	0.47	-0.1
3,565,623	-	mltA	Sama_2992	0.52	-0.6
3,565,636	+	mltA	Sama_2992	0.53	-0.5
3,565,732	+	mltA	Sama_2992	0.62	-0.5
3,565,732	+	mltA	Sama_2992	0.62	-2.7
3,565,732	+	mltA	Sama_2992	0.62	-2.3
3,565,732	+	mltA	Sama_2992	0.62	-0.7
3,565,733	-	mltA	Sama_2992	0.62	-0.4
3,565,733	-	mltA	Sama_2992	0.62	-0.1
3,565,733	-	mltA	Sama_2992	0.62	-0.5
3,565,763	+	mltA	Sama_2992	0.65	+1.8
3,565,987	+	mltA	Sama_2992	0.85	-0.2
3,565,988	-	mltA	Sama_2992	0.85	-1.1
3,566,056	+				-0.5
3,566,103	-				-0.7
3,566,135	+				+0.6
3,566,135	+				-1.2
3,566,136	-				-0.2
3,566,175	+				+0.2
3,566,176	-				-0.4
3,566,267	-				+3.4
3,566,271	+				+0.1
3,566,297	+				-2.5
3,566,363	+				-0.5
3,566,364	-				+0.2
3,566,382	+				+0.4
3,566,382	+				+3.8
3,566,382	+				-0.5
3,566,383	-				+4.5
3,566,428	+		Sama_2993	0.14	+0.2
3,566,428	+		Sama_2993	0.14	-2.5
3,566,428	+		Sama_2993	0.14	+0.5
3,566,429	-		Sama_2993	0.14	-0.5
3,566,429	-		Sama_2993	0.14	-0.6
3,566,496	-		Sama_2993	0.21	+2.4
3,566,589	+		Sama_2993	0.31	+5.4
3,566,589	+		Sama_2993	0.31	-0.2
3,566,589	+		Sama_2993	0.31	-1.2
3,566,589	+		Sama_2993	0.31	-0.8
3,566,589	+		Sama_2993	0.31	-1.5
3,566,589	+		Sama_2993	0.31	-0.2
3,566,589	+		Sama_2993	0.31	-0.7
3,566,589	+		Sama_2993	0.31	-1.8
3,566,589	+		Sama_2993	0.31	-0.9
3,566,589	+		Sama_2993	0.31	+3.0
3,566,589	+		Sama_2993	0.31	-1.5
3,566,589	+		Sama_2993	0.31	+3.5
3,566,589	+		Sama_2993	0.31	+4.0
3,566,589	+		Sama_2993	0.31	-1.0
3,566,589	+		Sama_2993	0.31	-1.0
3,566,589	+		Sama_2993	0.31	+1.6
3,566,589	+		Sama_2993	0.31	+2.4
3,566,590	-		Sama_2993	0.31	+0.5
3,566,590	-		Sama_2993	0.31	-1.4
3,566,590	-		Sama_2993	0.31	+1.2
3,566,590	-		Sama_2993	0.31	+2.8
3,566,590	-		Sama_2993	0.31	-0.7
3,566,590	-		Sama_2993	0.31	-0.4
3,566,590	-		Sama_2993	0.31	-2.8
3,566,590	-		Sama_2993	0.31	+4.2
3,566,590	-		Sama_2993	0.31	+1.1
3,566,590	-		Sama_2993	0.31	-0.5
3,566,590	-		Sama_2993	0.31	+1.6
3,566,590	-		Sama_2993	0.31	-0.9
3,566,593	+		Sama_2993	0.31	-0.5
3,566,593	+		Sama_2993	0.31	-0.5
3,566,593	+		Sama_2993	0.31	+0.6
3,566,593	+		Sama_2993	0.31	-0.0
3,566,593	+		Sama_2993	0.31	+3.3
3,566,593	+		Sama_2993	0.31	-1.0
3,566,593	+		Sama_2993	0.31	-0.2
3,566,594	-		Sama_2993	0.31	-1.2
3,566,621	+		Sama_2993	0.34	-0.8
3,566,621	+		Sama_2993	0.34	-0.9
3,566,622	-		Sama_2993	0.34	-1.4
3,566,622	-		Sama_2993	0.34	-0.4
3,566,693	-		Sama_2993	0.42	-0.5
3,566,712	+		Sama_2993	0.44	-1.0
3,566,712	+		Sama_2993	0.44	-1.9
3,566,712	+		Sama_2993	0.44	+2.7
3,566,712	+		Sama_2993	0.44	+1.0
3,566,712	+		Sama_2993	0.44	-1.5
3,566,712	+		Sama_2993	0.44	+2.3
3,566,712	+		Sama_2993	0.44	-2.3
3,566,712	+		Sama_2993	0.44	-2.3
3,566,712	+		Sama_2993	0.44	-1.0
3,566,712	+		Sama_2993	0.44	-1.5
3,566,712	+		Sama_2993	0.44	-1.3
3,566,713	-		Sama_2993	0.44	+1.5
3,566,713	-		Sama_2993	0.44	+1.8
3,566,713	-		Sama_2993	0.44	+1.2
3,566,713	-		Sama_2993	0.44	-1.2
3,566,713	-		Sama_2993	0.44	+1.1
3,566,713	-		Sama_2993	0.44	-0.2
3,566,713	-		Sama_2993	0.44	+1.5
3,566,713	-		Sama_2993	0.44	+0.0
3,566,713	-		Sama_2993	0.44	-0.9
3,566,713	-		Sama_2993	0.44	-0.2
3,566,713	-		Sama_2993	0.44	+1.2
3,566,713	-		Sama_2993	0.44	+0.8
3,566,713	-		Sama_2993	0.44	-0.6
3,566,713	-		Sama_2993	0.44	-0.2
3,566,713	-		Sama_2993	0.44	+3.1
3,566,713	-		Sama_2993	0.44	+3.2
3,566,778	-		Sama_2993	0.51	-2.0
3,566,778	-		Sama_2993	0.51	+0.3
3,566,821	+		Sama_2993	0.55	-1.4
3,566,821	+		Sama_2993	0.55	+2.8
3,566,822	-		Sama_2993	0.55	-1.2
3,566,822	-		Sama_2993	0.55	-1.7
3,566,822	-		Sama_2993	0.55	+2.5
3,566,822	-		Sama_2993	0.55	+2.1
3,566,854	+		Sama_2993	0.59	-0.5
3,566,854	+		Sama_2993	0.59	+2.8
3,566,855	-		Sama_2993	0.59	+4.4
3,566,855	-		Sama_2993	0.59	-1.1
3,566,872	+		Sama_2993	0.61	+2.6
3,566,872	+		Sama_2993	0.61	-1.1
3,566,873	-		Sama_2993	0.61	-0.2
3,566,873	-		Sama_2993	0.61	-1.2
3,566,962	-		Sama_2993	0.70	+1.2
3,566,962	-		Sama_2993	0.70	+3.8
3,567,061	+		Sama_2993	0.80	+0.7
3,567,062	-		Sama_2993	0.81	-0.4
3,567,083	-		Sama_2993	0.83	-0.8
3,567,083	-		Sama_2993	0.83	+2.7
3,567,083	-		Sama_2993	0.83	-0.3
3,567,108	+		Sama_2993	0.85	-0.5
3,567,109	-		Sama_2993	0.86	+1.6
3,567,109	-		Sama_2993	0.86	-3.3
3,567,109	-		Sama_2993	0.86	-0.8
3,567,123	+		Sama_2993	0.87	-1.9
3,567,123	+		Sama_2993	0.87	-0.1
3,567,124	-		Sama_2993	0.87	+4.2
3,567,124	-		Sama_2993	0.87	+2.4
3,567,124	-		Sama_2993	0.87	-1.4
3,567,135	+		Sama_2993	0.88	+2.1
3,567,135	+		Sama_2993	0.88	+0.2
3,567,135	+		Sama_2993	0.88	+3.4
3,567,135	+		Sama_2993	0.88	-1.3
3,567,135	+		Sama_2993	0.88	-0.5
3,567,135	+		Sama_2993	0.88	+1.2
3,567,136	-		Sama_2993	0.88	-0.5
3,567,136	-		Sama_2993	0.88	+1.2
3,567,136	-		Sama_2993	0.88	-0.5
3,567,136	-		Sama_2993	0.88	-0.9
3,567,136	-		Sama_2993	0.88	+2.8
3,567,136	-		Sama_2993	0.88	-1.3