Strain Fitness in Shewanella amazonensis SB2B around Sama_2991

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
3,563,616	-		Sama_2990	0.71	-1.6
3,563,616	-		Sama_2990	0.71	-0.1
3,563,657	+		Sama_2990	0.73	+0.9
3,563,657	+		Sama_2990	0.73	+1.4
3,563,657	+		Sama_2990	0.73	-0.3
3,563,658	-		Sama_2990	0.73	+0.8
3,563,671	+		Sama_2990	0.73	-0.5
3,563,672	-		Sama_2990	0.73	-0.8
3,563,734	+		Sama_2990	0.76	-3.4
3,563,735	-		Sama_2990	0.76	+2.0
3,563,735	-		Sama_2990	0.76	-0.2
3,563,735	-		Sama_2990	0.76	-0.9
3,563,865	+		Sama_2990	0.83	-1.6
3,563,865	+		Sama_2990	0.83	+0.4
3,563,865	+		Sama_2990	0.83	+0.2
3,563,865	+		Sama_2990	0.83	-0.0
3,563,865	+		Sama_2990	0.83	-0.2
3,563,866	-		Sama_2990	0.83	-1.2
3,563,866	-		Sama_2990	0.83	-0.8
3,563,866	-		Sama_2990	0.83	-0.7
3,563,866	-		Sama_2990	0.83	+0.6
3,563,886	+		Sama_2990	0.84	+1.6
3,563,887	-		Sama_2990	0.84	+0.2
3,563,887	-		Sama_2990	0.84	+2.4
3,563,997	-		Sama_2990	0.89	-2.3
3,563,997	-		Sama_2990	0.89	-1.0
3,564,041	+				-2.4
3,564,042	-				+0.7
3,564,042	-				-2.6
3,564,095	-				-0.1
3,564,111	+				+0.2
3,564,111	+				+0.8
3,564,111	+				+0.2
3,564,128	+				+1.7
3,564,128	+				-1.6
3,564,128	+				-3.5
3,564,129	-				-2.0
3,564,178	+				-1.4
3,564,249	+				-1.2
3,564,249	+				-0.8
3,564,249	+				-0.5
3,564,249	+				+2.7
3,564,249	+				+2.3
3,564,249	+				+1.1
3,564,249	+				+1.4
3,564,249	+				-0.5
3,564,249	+				+2.7
3,564,249	+				+2.6
3,564,249	+				-1.3
3,564,250	-				-2.3
3,564,250	-				-1.3
3,564,250	-				-0.8
3,564,250	-				-0.9
3,564,252	+				+3.4
3,564,252	+				+0.8
3,564,252	+				+0.8
3,564,253	-				-1.7
3,564,253	-				-1.6
3,564,290	+				-0.0
3,564,291	-				+3.2
3,564,291	-				-2.0
3,564,352	+				+2.1
3,564,382	+				-1.6
3,564,382	+				+4.5
3,564,382	+				-0.7
3,564,382	+				+1.6
3,564,383	-				+0.2
3,564,396	+				+0.2
3,564,397	-				-1.7
3,564,469	+				+1.6
3,564,469	+				-0.2
3,564,469	+				-0.0
3,564,469	+				-0.7
3,564,469	+				+1.2
3,564,469	+				-1.0
3,564,469	+				-0.9
3,564,469	+				+3.3
3,564,469	+				-0.2
3,564,469	+				-0.2
3,564,469	+				+2.4
3,564,470	-				-0.5
3,564,470	-				-0.8
3,564,470	-				+0.4
3,564,470	-				+0.0
3,564,470	-				-0.1
3,564,470	-				+0.4
3,564,471	+				-0.8
3,564,471	+				-2.2
3,564,471	+				+1.0
3,564,471	+				-0.3
3,564,471	+				-1.8
3,564,471	+				-0.4
3,564,472	-				-0.2
3,564,472	-				-1.3
3,564,472	-				+0.4
3,564,630	-				-1.6
3,564,632	+				+0.8
3,564,632	+				+0.5
3,564,648	+				+3.9
3,564,649	-				+0.8
3,564,649	-				-1.8
3,564,678	+		Sama_2991	0.17	+2.3
3,564,678	+		Sama_2991	0.17	-1.4
3,564,678	+		Sama_2991	0.17	-0.8
3,564,678	+		Sama_2991	0.17	-1.7
3,564,678	+		Sama_2991	0.17	+0.5
3,564,678	+		Sama_2991	0.17	+0.6
3,564,678	+		Sama_2991	0.17	-0.3
3,564,678	+		Sama_2991	0.17	-0.8
3,564,678	+		Sama_2991	0.17	+4.9
3,564,678	+		Sama_2991	0.17	-0.1
3,564,678	+		Sama_2991	0.17	+2.6
3,564,678	+		Sama_2991	0.17	-1.2
3,564,679	-		Sama_2991	0.17	-1.0
3,564,679	-		Sama_2991	0.17	-1.2
3,564,679	-		Sama_2991	0.17	-0.2
3,564,679	-		Sama_2991	0.17	-1.1
3,564,679	-		Sama_2991	0.17	+1.4
3,564,759	+		Sama_2991	0.38	+0.4
3,564,759	+		Sama_2991	0.38	-0.2
3,564,759	+		Sama_2991	0.38	+1.3
3,564,759	+		Sama_2991	0.38	-2.3
3,564,759	+		Sama_2991	0.38	-0.0
3,564,759	+		Sama_2991	0.38	+0.8
3,564,759	+		Sama_2991	0.38	-2.7
3,564,760	-		Sama_2991	0.38	-0.8
3,564,760	-		Sama_2991	0.38	+0.4
3,564,760	-		Sama_2991	0.38	-2.1
3,564,760	-		Sama_2991	0.38	+2.0
3,564,760	-		Sama_2991	0.38	-0.9
3,564,808	+		Sama_2991	0.51	-0.1
3,564,809	-		Sama_2991	0.51	-0.2
3,564,873	+		Sama_2991	0.68	-1.2
3,564,874	-		Sama_2991	0.69	-0.1
3,564,901	+		Sama_2991	0.76	+2.8
3,564,901	+		Sama_2991	0.76	-1.4
3,564,901	+		Sama_2991	0.76	-2.5
3,564,901	+		Sama_2991	0.76	+0.8
3,564,901	+		Sama_2991	0.76	-2.5
3,564,902	-		Sama_2991	0.76	-1.0
3,564,902	-		Sama_2991	0.76	-2.4
3,564,902	-		Sama_2991	0.76	-2.4
3,564,902	-		Sama_2991	0.76	-0.2
3,564,902	-		Sama_2991	0.76	-1.8
3,564,902	-		Sama_2991	0.76	-0.2
3,564,902	-		Sama_2991	0.76	-2.8
3,564,902	-		Sama_2991	0.76	+0.8
3,564,902	-		Sama_2991	0.76	-0.2
3,564,929	+		Sama_2991	0.83	-2.2
3,564,929	+		Sama_2991	0.83	+1.9
3,564,930	-		Sama_2991	0.83	-1.2
3,564,930	-		Sama_2991	0.83	-3.1
3,564,930	-		Sama_2991	0.83	+2.3
3,564,930	-		Sama_2991	0.83	-1.9
3,564,930	-		Sama_2991	0.83	+0.5
3,564,930	-		Sama_2991	0.83	-0.8
3,564,934	+		Sama_2991	0.84	-1.1
3,564,934	+		Sama_2991	0.84	-1.0
3,564,935	-		Sama_2991	0.85	-0.3
3,564,953	+		Sama_2991	0.89	-2.2
3,564,953	+		Sama_2991	0.89	-1.1
3,564,953	+		Sama_2991	0.89	-0.9
3,564,953	+		Sama_2991	0.89	+1.6
3,564,954	-		Sama_2991	0.90	-1.2
3,564,954	-		Sama_2991	0.90	-1.2
3,564,954	-		Sama_2991	0.90	-1.5
3,564,954	-		Sama_2991	0.90	-1.8
3,564,954	-		Sama_2991	0.90	+1.0
3,564,954	-		Sama_2991	0.90	+3.9
3,564,971	-				-0.5
3,565,015	+				-0.7
3,565,015	+				+1.2
3,565,015	+				-1.4
3,565,016	-				+0.6
3,565,016	-				+2.2
3,565,016	-				+0.3
3,565,016	-				+0.9
3,565,016	-				-0.4
3,565,016	-				-1.8
3,565,016	-				+3.0
3,565,016	-				+0.1
3,565,016	-				+2.5
3,565,016	-				-1.2
3,565,016	-				-0.9
3,565,016	-				-1.0
3,565,016	-				-0.0
3,565,016	-				-0.6
3,565,021	+				+2.0
3,565,021	+				+1.5
3,565,021	+				+2.7
3,565,021	+				-0.5
3,565,021	+				-1.5
3,565,021	+				-0.2
3,565,021	+				-1.2
3,565,022	-				-1.0
3,565,022	-				+1.2
3,565,092	+				-2.1
3,565,092	+				-0.5
3,565,093	-				-2.0
3,565,111	+				-0.5
3,565,112	-				+1.6
3,565,112	-				+0.8
3,565,154	-	mltA	Sama_2992	0.10	+0.2
3,565,239	+	mltA	Sama_2992	0.18	-1.9
3,565,239	+	mltA	Sama_2992	0.18	-0.0
3,565,239	+	mltA	Sama_2992	0.18	-1.4
3,565,240	-	mltA	Sama_2992	0.18	-0.5
3,565,334	+	mltA	Sama_2992	0.26	+3.0
3,565,335	-	mltA	Sama_2992	0.26	-0.3
3,565,506	-	mltA	Sama_2992	0.42	-0.9
3,565,509	+	mltA	Sama_2992	0.42	-1.7
3,565,509	+	mltA	Sama_2992	0.42	-2.4
3,565,509	+	mltA	Sama_2992	0.42	+0.6
3,565,509	+	mltA	Sama_2992	0.42	+2.7
3,565,509	+	mltA	Sama_2992	0.42	-1.6
3,565,509	+	mltA	Sama_2992	0.42	+2.5
3,565,509	+	mltA	Sama_2992	0.42	+1.8
3,565,509	+	mltA	Sama_2992	0.42	-0.8
3,565,510	-	mltA	Sama_2992	0.42	+0.8
3,565,544	-	mltA	Sama_2992	0.45	+0.8
3,565,544	-	mltA	Sama_2992	0.45	-1.9
3,565,552	+	mltA	Sama_2992	0.46	+0.1
3,565,552	+	mltA	Sama_2992	0.46	-1.4
3,565,552	+	mltA	Sama_2992	0.46	+1.4
3,565,552	+	mltA	Sama_2992	0.46	+3.8
3,565,553	-	mltA	Sama_2992	0.46	+4.8
3,565,568	+	mltA	Sama_2992	0.47	-0.1
3,565,623	-	mltA	Sama_2992	0.52	-0.6
3,565,636	+	mltA	Sama_2992	0.53	-0.5
3,565,732	+	mltA	Sama_2992	0.62	-0.5
3,565,732	+	mltA	Sama_2992	0.62	-2.7
3,565,732	+	mltA	Sama_2992	0.62	-2.3
3,565,732	+	mltA	Sama_2992	0.62	-0.7
3,565,733	-	mltA	Sama_2992	0.62	-0.4
3,565,733	-	mltA	Sama_2992	0.62	-0.1
3,565,733	-	mltA	Sama_2992	0.62	-0.5
3,565,763	+	mltA	Sama_2992	0.65	+1.8
3,565,987	+	mltA	Sama_2992	0.85	-0.2
3,565,988	-	mltA	Sama_2992	0.85	-1.1