Strain Fitness in Shewanella amazonensis SB2B around Sama_2946

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
3,501,463	+				+1.0
3,501,463	+				-2.1
3,501,464	-				-1.3
3,501,480	+				-0.5
3,501,480	+				-1.4
3,501,514	+				-1.5
3,501,515	-				-1.0
3,501,515	-				-0.7
3,501,516	+				+2.6
3,501,517	-				+1.7
3,501,517	-				-1.1
3,501,517	-				-1.4
3,501,517	-				+0.2
3,501,517	-				-1.0
3,501,517	-				+3.4
3,501,517	-				-0.6
3,501,533	-				-1.7
3,501,533	-				-1.1
3,501,536	-				+0.6
3,501,536	-				-1.0
3,501,536	-				-0.0
3,501,551	+				-2.3
3,501,551	+				-0.5
3,501,551	+				-0.4
3,501,551	+				-1.7
3,501,551	+				+0.5
3,501,552	-				+0.5
3,501,552	-				-1.3
3,501,555	+				-0.8
3,501,555	+				-0.6
3,501,555	+				+0.2
3,501,556	-				+3.5
3,501,556	-				-0.4
3,501,556	-				+2.4
3,501,556	-				-0.7
3,501,556	-				+3.5
3,501,556	-				+0.9
3,501,562	+				+0.6
3,501,562	+				-1.4
3,501,562	+				-1.3
3,501,563	-				-0.0
3,501,563	-				-1.2
3,501,563	-				-1.6
3,501,650	-				-0.2
3,501,662	-				+2.8
3,501,665	+				+0.7
3,501,666	-				-0.3
3,501,714	+				-2.5
3,501,714	+				-1.3
3,501,717	+				-1.3
3,501,718	-				-1.0
3,501,718	-				+1.1
3,501,735	+				-0.4
3,501,756	+				+1.3
3,501,757	-				+0.5
3,501,757	-				-1.2
3,501,772	-				+0.7
3,501,801	+				-2.7
3,501,840	+				+4.2
3,501,840	+				+2.0
3,501,942	+				-1.8
3,501,943	-				-1.2
3,502,000	+				-0.4
3,502,001	-				-0.0
3,502,001	-				+0.9
3,502,001	-				+2.4
3,502,052	+				+1.0
3,502,052	+				-0.6
3,502,052	+				-0.8
3,502,052	+				+0.4
3,502,053	-				-1.4
3,502,072	+				+0.9
3,502,072	+				+1.2
3,502,073	-				+2.8
3,502,073	-				+0.6
3,502,089	+				-0.2
3,502,139	+				+3.1
3,502,163	-				-1.0
3,502,189	+				-0.8
3,502,195	+				-0.8
3,502,195	+				-1.5
3,502,196	-				-0.4
3,502,196	-				+2.4
3,502,196	-				-1.7
3,502,196	-				+1.4
3,502,196	-				-2.6
3,502,199	+				+4.3
3,502,203	-				-0.3
3,502,203	-				-0.1
3,502,203	-				+1.3
3,502,208	-				-1.2
3,502,208	-				+0.7
3,502,213	-				-0.6
3,502,228	+				+1.3
3,502,319	+				+0.6
3,502,319	+				-0.8
3,502,320	-				+3.6
3,502,320	-				-0.8
3,502,324	-				-0.3
3,502,324	-				-1.8
3,502,347	-				-1.3
3,502,406	-				-0.5
3,502,453	+				-0.9
3,502,514	-		Sama_2946	0.20	-0.4
3,502,597	+		Sama_2946	0.39	-0.8
3,502,597	+		Sama_2946	0.39	-2.6
3,502,597	+		Sama_2946	0.39	+1.7
3,502,598	-		Sama_2946	0.39	+0.0
3,502,598	-		Sama_2946	0.39	+1.4
3,502,649	+		Sama_2946	0.51	+2.0
3,502,649	+		Sama_2946	0.51	+1.7
3,502,649	+		Sama_2946	0.51	+0.9
3,502,649	+		Sama_2946	0.51	+0.3
3,502,649	+		Sama_2946	0.51	-1.1
3,502,650	-		Sama_2946	0.51	+1.4
3,502,650	-		Sama_2946	0.51	-0.6
3,502,650	-		Sama_2946	0.51	+0.5
3,502,650	-		Sama_2946	0.51	+3.6
3,502,650	-		Sama_2946	0.51	-1.7
3,502,753	+		Sama_2946	0.75	-0.3
3,502,754	-		Sama_2946	0.75	-0.9
3,502,763	-		Sama_2946	0.77	-1.3
3,502,763	-		Sama_2946	0.77	-0.7
3,502,814	+		Sama_2946	0.89	+0.8
3,502,814	+		Sama_2946	0.89	-1.3
3,502,815	-		Sama_2946	0.89	-1.1
3,502,841	+				+1.0
3,502,841	+				+0.2
3,502,841	+				-0.4
3,502,857	+				+0.0
3,502,857	+				-0.1
3,502,857	+				-2.8
3,502,858	-				+4.1
3,502,860	+				-0.7
3,502,910	+				+4.1
3,502,976	+				+1.8
3,502,991	-				-0.6
3,502,995	+				-0.5
3,503,024	+				-0.6
3,503,024	+				-0.3
3,503,024	+				+0.3
3,503,024	+				-1.4
3,503,024	+				+3.2
3,503,024	+				+0.7
3,503,025	-				-2.4
3,503,025	-				+1.0
3,503,025	-				-0.1
3,503,076	-		Sama_2947	0.13	+4.2
3,503,090	+		Sama_2947	0.14	-1.9
3,503,090	+		Sama_2947	0.14	+0.8
3,503,090	+		Sama_2947	0.14	+0.2
3,503,091	-		Sama_2947	0.14	+1.3
3,503,091	-		Sama_2947	0.14	-0.8
3,503,130	+		Sama_2947	0.17	+0.8
3,503,131	-		Sama_2947	0.17	-0.4
3,503,190	+		Sama_2947	0.21	+0.7
3,503,191	-		Sama_2947	0.21	-1.8
3,503,306	+		Sama_2947	0.29	-1.0
3,503,306	+		Sama_2947	0.29	+2.6
3,503,306	+		Sama_2947	0.29	+1.4
3,503,362	+		Sama_2947	0.32	-0.8
3,503,362	+		Sama_2947	0.32	+0.9
3,503,363	-		Sama_2947	0.32	-1.1
3,503,363	-		Sama_2947	0.32	-1.3
3,503,363	-		Sama_2947	0.32	+3.3
3,503,363	-		Sama_2947	0.32	-1.3
3,503,363	-		Sama_2947	0.32	+0.4
3,503,363	-		Sama_2947	0.32	-1.7
3,503,363	-		Sama_2947	0.32	-2.7
3,503,363	-		Sama_2947	0.32	-0.3
3,503,391	+		Sama_2947	0.34	-2.0
3,503,418	+		Sama_2947	0.36	+1.2
3,503,491	+		Sama_2947	0.41	-3.5
3,503,492	-		Sama_2947	0.41	+2.3
3,503,492	-		Sama_2947	0.41	-1.6
3,503,593	+		Sama_2947	0.48	-0.8
3,503,594	-		Sama_2947	0.48	+1.2
3,503,768	+		Sama_2947	0.59	+1.1
3,503,768	+		Sama_2947	0.59	+0.7
3,503,768	+		Sama_2947	0.59	+1.2
3,503,768	+		Sama_2947	0.59	+0.7
3,503,768	+		Sama_2947	0.59	-2.7
3,503,769	-		Sama_2947	0.59	-1.0
3,503,769	-		Sama_2947	0.59	+1.9
3,503,769	-		Sama_2947	0.59	+1.3
3,503,769	-		Sama_2947	0.59	+2.2
3,503,769	-		Sama_2947	0.59	-0.7
3,503,769	-		Sama_2947	0.59	+2.0
3,503,809	-		Sama_2947	0.62	+0.7
3,503,809	-		Sama_2947	0.62	-2.1