Strain Fitness in Shewanella amazonensis SB2B around Sama_2794

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
3,331,708	+		Sama_2792	0.20	-2.4
3,331,709	-		Sama_2792	0.20	-0.8
3,331,738	+		Sama_2792	0.25	+1.6
3,331,821	+		Sama_2792	0.41	-0.9
3,331,821	+		Sama_2792	0.41	-0.3
3,331,821	+		Sama_2792	0.41	-1.3
3,331,822	-		Sama_2792	0.41	-0.2
3,331,822	-		Sama_2792	0.41	+2.0
3,331,822	-		Sama_2792	0.41	-1.9
3,331,822	-		Sama_2792	0.41	-0.3
3,331,831	+		Sama_2792	0.43	+1.3
3,331,831	+		Sama_2792	0.43	+0.6
3,331,832	-		Sama_2792	0.43	-0.1
3,331,945	+		Sama_2792	0.64	-1.5
3,331,960	-		Sama_2792	0.67	+2.8
3,331,960	-		Sama_2792	0.67	+3.4
3,332,015	+		Sama_2792	0.77	-0.5
3,332,015	+		Sama_2792	0.77	+3.4
3,332,016	-		Sama_2792	0.77	+3.9
3,332,016	-		Sama_2792	0.77	+2.7
3,332,042	-		Sama_2792	0.82	-0.6
3,332,042	-		Sama_2792	0.82	+7.0
3,332,042	-		Sama_2792	0.82	+1.0
3,332,140	-				-1.0
3,332,156	-				-2.3
3,332,156	-				+2.2
3,332,160	+				-0.3
3,332,169	+				-0.4
3,332,170	-				+1.3
3,332,172	+				-0.3
3,332,173	-				-2.1
3,332,246	+				-0.2
3,332,270	+				+0.4
3,332,271	-				+1.2
3,332,276	+				+0.1
3,332,276	+				-1.3
3,332,277	-				-2.7
3,332,277	-				+1.0
3,332,277	-				+1.7
3,332,287	+				-0.3
3,332,288	-				+2.2
3,332,288	-				+2.6
3,332,309	+				+0.5
3,332,309	+				+5.7
3,332,309	+				+5.6
3,332,309	+				-1.3
3,332,310	-				-0.6
3,332,310	-				+5.4
3,332,310	-				+2.6
3,332,310	-				+3.4
3,332,346	-				+4.3
3,332,346	-				-2.3
3,332,384	+				+4.5
3,332,385	-				+0.0
3,332,385	-				-0.9
3,332,424	-		Sama_2793	0.21	+4.5
3,332,453	+		Sama_2793	0.32	-0.5
3,332,453	+		Sama_2793	0.32	-2.3
3,332,453	+		Sama_2793	0.32	+7.7
3,332,453	+		Sama_2793	0.32	+5.5
3,332,454	-		Sama_2793	0.33	-1.9
3,332,454	-		Sama_2793	0.33	+0.7
3,332,454	-		Sama_2793	0.33	+3.3
3,332,454	-		Sama_2793	0.33	+0.7
3,332,454	-		Sama_2793	0.33	+2.7
3,332,559	+		Sama_2793	0.72	+2.0
3,332,560	-		Sama_2793	0.72	-0.8
3,332,575	+		Sama_2793	0.78	+2.5
3,332,575	+		Sama_2793	0.78	+3.7
3,332,601	+		Sama_2793	0.88	+2.6
3,332,601	+		Sama_2793	0.88	+1.1
3,332,602	-		Sama_2793	0.88	+0.0
3,332,602	-		Sama_2793	0.88	+2.0
3,332,653	+				-1.5
3,332,698	+				+0.1
3,332,698	+				+3.0
3,332,753	+				-1.1
3,332,753	+				+1.1
3,332,753	+				+1.6
3,332,753	+				-2.3
3,332,754	-				+2.6
3,332,871	+		Sama_2794	0.16	+1.5
3,332,871	+		Sama_2794	0.16	+2.6
3,332,872	-		Sama_2794	0.16	-2.1
3,332,872	-		Sama_2794	0.16	-0.3
3,332,932	+		Sama_2794	0.22	-1.1
3,332,932	+		Sama_2794	0.22	-0.5
3,332,933	-		Sama_2794	0.22	+2.5
3,332,962	+		Sama_2794	0.25	+1.7
3,332,962	+		Sama_2794	0.25	-0.9
3,332,962	+		Sama_2794	0.25	+4.4
3,332,963	-		Sama_2794	0.25	-3.2
3,332,963	-		Sama_2794	0.25	+0.1
3,332,992	+		Sama_2794	0.28	-1.3
3,332,993	-		Sama_2794	0.28	+1.6
3,332,993	-		Sama_2794	0.28	-1.4
3,332,993	-		Sama_2794	0.28	+2.8
3,333,044	+		Sama_2794	0.33	+1.6
3,333,044	+		Sama_2794	0.33	-2.6
3,333,085	-		Sama_2794	0.36	+0.8
3,333,122	+		Sama_2794	0.40	-1.5
3,333,124	+		Sama_2794	0.40	-1.6
3,333,124	+		Sama_2794	0.40	-0.6
3,333,125	-		Sama_2794	0.40	-0.9
3,333,125	-		Sama_2794	0.40	+2.1
3,333,125	-		Sama_2794	0.40	-1.8
3,333,125	-		Sama_2794	0.40	-0.4
3,333,125	-		Sama_2794	0.40	+1.3
3,333,125	-		Sama_2794	0.40	+0.1
3,333,125	-		Sama_2794	0.40	-0.7
3,333,195	-		Sama_2794	0.47	-1.3
3,333,235	+		Sama_2794	0.51	-1.5
3,333,235	+		Sama_2794	0.51	-0.9
3,333,235	+		Sama_2794	0.51	+0.2
3,333,236	-		Sama_2794	0.51	-1.1
3,333,236	-		Sama_2794	0.51	+0.4
3,333,236	-		Sama_2794	0.51	-1.2
3,333,317	+		Sama_2794	0.58	-2.5
3,333,317	+		Sama_2794	0.58	+0.5
3,333,318	-		Sama_2794	0.58	-0.1
3,333,318	-		Sama_2794	0.58	-0.1
3,333,318	-		Sama_2794	0.58	+1.3
3,333,318	-		Sama_2794	0.58	+2.6
3,333,318	-		Sama_2794	0.58	-1.6
3,333,334	+		Sama_2794	0.60	-0.6
3,333,335	-		Sama_2794	0.60	-1.1
3,333,335	-		Sama_2794	0.60	+1.1
3,333,336	+		Sama_2794	0.60	+2.3
3,333,336	+		Sama_2794	0.60	-0.5
3,333,336	+		Sama_2794	0.60	+0.3
3,333,336	+		Sama_2794	0.60	+1.0
3,333,336	+		Sama_2794	0.60	-0.7
3,333,337	-		Sama_2794	0.60	-1.0
3,333,337	-		Sama_2794	0.60	+0.6
3,333,337	-		Sama_2794	0.60	+0.6
3,333,337	-		Sama_2794	0.60	-1.3
3,333,337	-		Sama_2794	0.60	-2.2
3,333,337	-		Sama_2794	0.60	+1.1
3,333,386	+		Sama_2794	0.65	-1.3
3,333,386	+		Sama_2794	0.65	+1.2
3,333,386	+		Sama_2794	0.65	-1.1
3,333,399	-		Sama_2794	0.66	-0.2
3,333,442	+		Sama_2794	0.70	+1.2
3,333,442	+		Sama_2794	0.70	-1.5
3,333,442	+		Sama_2794	0.70	+1.6
3,333,443	-		Sama_2794	0.70	-1.3
3,333,443	-		Sama_2794	0.70	-1.2
3,333,443	-		Sama_2794	0.70	-0.5
3,333,443	-		Sama_2794	0.70	-0.8
3,333,474	+		Sama_2794	0.73	-0.3
3,333,474	+		Sama_2794	0.73	-1.3
3,333,475	-		Sama_2794	0.73	-1.1
3,333,495	+		Sama_2794	0.75	-1.5
3,333,495	+		Sama_2794	0.75	-3.0
3,333,495	+		Sama_2794	0.75	+2.5
3,333,495	+		Sama_2794	0.75	-1.8
3,333,496	-		Sama_2794	0.75	-2.9
3,333,496	-		Sama_2794	0.75	-1.3
3,333,496	-		Sama_2794	0.75	-0.3
3,333,496	-		Sama_2794	0.75	-0.6
3,333,496	-		Sama_2794	0.75	-0.0
3,333,496	-		Sama_2794	0.75	-0.9
3,333,496	-		Sama_2794	0.75	-0.5
3,333,496	-		Sama_2794	0.75	-0.2
3,333,497	+		Sama_2794	0.75	-1.4
3,333,497	+		Sama_2794	0.75	+0.0
3,333,498	-		Sama_2794	0.75	-3.5
3,333,498	-		Sama_2794	0.75	-1.4
3,333,503	+		Sama_2794	0.76	+0.3
3,333,503	+		Sama_2794	0.76	+0.9
3,333,504	-		Sama_2794	0.76	-0.5
3,333,504	-		Sama_2794	0.76	+0.4
3,333,526	+		Sama_2794	0.78	+1.7
3,333,527	-		Sama_2794	0.78	+1.7
3,333,527	-		Sama_2794	0.78	+2.3
3,333,557	+		Sama_2794	0.81	+1.3
3,333,557	+		Sama_2794	0.81	-0.9
3,333,557	+		Sama_2794	0.81	-1.9
3,333,558	-		Sama_2794	0.81	-0.5
3,333,558	-		Sama_2794	0.81	-2.5
3,333,574	+		Sama_2794	0.82	-1.1
3,333,574	+		Sama_2794	0.82	-0.6
3,333,575	-		Sama_2794	0.82	-1.1
3,333,575	-		Sama_2794	0.82	-1.5
3,333,575	-		Sama_2794	0.82	-0.2
3,333,575	-		Sama_2794	0.82	+1.8
3,333,575	-		Sama_2794	0.82	+1.1
3,333,648	-		Sama_2794	0.89	-0.8
3,333,659	+				-1.0
3,333,677	-				-0.1
3,333,677	+				-0.8
3,333,678	-				+1.7
3,333,683	-				-1.5
3,333,701	+				-0.2
3,333,701	+				+1.4
3,333,701	+				+0.4
3,333,701	+				-2.4
3,333,701	+				-2.2
3,333,702	-				+2.9
3,333,702	-				-1.3
3,333,702	-				+0.1
3,333,702	-				-1.3
3,333,704	-				+0.1
3,333,704	-				+0.1
3,333,704	-				+2.2
3,333,704	-				-0.6
3,333,723	+				+1.7
3,333,724	-				+1.2
3,333,732	+				+3.9
3,333,732	+				-2.2
3,333,733	-				-0.3
3,333,733	-				-2.7
3,333,733	-				-1.3
3,333,785	+				-0.5
3,333,785	+				-0.8
3,333,785	+				-0.8
3,333,786	-				+3.4
3,333,786	-				+0.3
3,333,786	-				+1.6
3,333,786	-				-1.3
3,333,854	+				-2.5
3,333,854	+				+0.7
3,333,854	+				-1.5
3,333,855	-				-0.9
3,333,855	-				+0.6
3,333,977	+				-2.0
3,334,112	-		Sama_2795	0.15	+1.3
3,334,112	-		Sama_2795	0.15	-1.6
3,334,112	-		Sama_2795	0.15	+0.9
3,334,152	+		Sama_2795	0.17	+0.7
3,334,152	+		Sama_2795	0.17	+0.7
3,334,153	-		Sama_2795	0.17	-0.5
3,334,153	-		Sama_2795	0.17	-1.2
3,334,153	-		Sama_2795	0.17	-0.1
3,334,153	-		Sama_2795	0.17	-1.4
3,334,153	-		Sama_2795	0.17	-0.6
3,334,153	-		Sama_2795	0.17	-1.1
3,334,153	-		Sama_2795	0.17	+0.5
3,334,153	-		Sama_2795	0.17	+0.4
3,334,153	-		Sama_2795	0.17	-1.8
3,334,153	-		Sama_2795	0.17	-0.3
3,334,153	-		Sama_2795	0.17	-0.5
3,334,156	-		Sama_2795	0.17	-0.3
3,334,168	-		Sama_2795	0.18	+2.6
3,334,175	-		Sama_2795	0.18	+0.6
3,334,175	-		Sama_2795	0.18	-0.9
3,334,175	-		Sama_2795	0.18	-0.5
3,334,190	-		Sama_2795	0.19	+2.0
3,334,251	+		Sama_2795	0.22	-2.0
3,334,251	+		Sama_2795	0.22	+0.1
3,334,251	+		Sama_2795	0.22	-0.6
3,334,251	+		Sama_2795	0.22	-1.2
3,334,251	+		Sama_2795	0.22	-0.4
3,334,251	+		Sama_2795	0.22	-0.6
3,334,251	+		Sama_2795	0.22	-1.2
3,334,251	+		Sama_2795	0.22	+1.0
3,334,251	+		Sama_2795	0.22	+5.1
3,334,251	+		Sama_2795	0.22	+0.9
3,334,251	+		Sama_2795	0.22	+0.4
3,334,251	+		Sama_2795	0.22	-0.5
3,334,252	-		Sama_2795	0.22	+1.9
3,334,252	-		Sama_2795	0.22	+0.2
3,334,252	-		Sama_2795	0.22	-1.6
3,334,252	-		Sama_2795	0.22	+0.7
3,334,252	-		Sama_2795	0.22	-0.3
3,334,252	-		Sama_2795	0.22	-0.6
3,334,252	-		Sama_2795	0.22	+2.9
3,334,252	-		Sama_2795	0.22	-1.1
3,334,252	-		Sama_2795	0.22	+0.5
3,334,252	-		Sama_2795	0.22	-1.0
3,334,303	-		Sama_2795	0.24	+4.3
3,334,441	+		Sama_2795	0.30	-2.6
3,334,442	-		Sama_2795	0.30	-0.2
3,334,456	+		Sama_2795	0.31	+0.1
3,334,457	-		Sama_2795	0.31	-1.6
3,334,486	-		Sama_2795	0.32	-1.8
3,334,508	-		Sama_2795	0.33	-0.6
3,334,508	-		Sama_2795	0.33	+0.1
3,334,524	+		Sama_2795	0.34	-0.9
3,334,524	+		Sama_2795	0.34	-1.3
3,334,524	+		Sama_2795	0.34	-2.3
3,334,525	-		Sama_2795	0.34	+1.5
3,334,593	+		Sama_2795	0.37	+0.9
3,334,593	+		Sama_2795	0.37	-0.6
3,334,593	+		Sama_2795	0.37	-0.0
3,334,593	+		Sama_2795	0.37	+1.8
3,334,593	+		Sama_2795	0.37	+2.3
3,334,685	-		Sama_2795	0.41	+0.7
3,334,729	+		Sama_2795	0.42	+1.2
3,334,729	+		Sama_2795	0.42	-2.0
3,334,729	+		Sama_2795	0.42	+0.7
3,334,729	+		Sama_2795	0.42	-1.3
3,334,729	+		Sama_2795	0.42	+2.7
3,334,729	+		Sama_2795	0.42	+0.6
3,334,730	-		Sama_2795	0.43	+0.2
3,334,730	-		Sama_2795	0.43	-1.8
3,334,730	-		Sama_2795	0.43	-0.2
3,334,737	+		Sama_2795	0.43	-2.3
3,334,737	+		Sama_2795	0.43	-1.2
3,334,738	-		Sama_2795	0.43	+2.1
3,334,738	-		Sama_2795	0.43	-0.3
3,334,738	-		Sama_2795	0.43	-2.1
3,334,738	-		Sama_2795	0.43	-0.3
3,334,738	-		Sama_2795	0.43	-1.0
3,334,738	-		Sama_2795	0.43	+2.2