Strain Fitness in Shewanella amazonensis SB2B around Sama_2782

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
3,323,723	-		Sama_2781	0.25	+1.6
3,323,766	+		Sama_2781	0.31	-0.9
3,323,766	+		Sama_2781	0.31	-1.3
3,323,768	+		Sama_2781	0.31	-0.6
3,323,768	+		Sama_2781	0.31	+0.1
3,323,769	-		Sama_2781	0.31	-1.6
3,323,776	+		Sama_2781	0.32	+1.4
3,323,872	-		Sama_2781	0.45	-0.6
3,323,876	+		Sama_2781	0.45	+1.4
3,323,876	+		Sama_2781	0.45	-0.3
3,323,930	-		Sama_2781	0.52	-1.1
3,323,930	-		Sama_2781	0.52	-0.2
3,323,930	-		Sama_2781	0.52	+5.2
3,323,930	-		Sama_2781	0.52	-0.9
3,323,930	-		Sama_2781	0.52	-2.7
3,323,933	+		Sama_2781	0.53	+0.4
3,323,986	-		Sama_2781	0.60	-2.1
3,324,086	-		Sama_2781	0.73	+1.0
3,324,086	-		Sama_2781	0.73	-1.9
3,324,089	-		Sama_2781	0.73	+1.9
3,324,134	+		Sama_2781	0.79	-1.7
3,324,135	-		Sama_2781	0.79	-0.6
3,324,135	-		Sama_2781	0.79	-0.7
3,324,147	+		Sama_2781	0.81	+4.2
3,324,147	+		Sama_2781	0.81	-1.6
3,324,148	-		Sama_2781	0.81	-0.1
3,324,174	-		Sama_2781	0.84	+0.8
3,324,177	+		Sama_2781	0.85	-0.1
3,324,205	+		Sama_2781	0.88	+2.2
3,324,205	+		Sama_2781	0.88	+2.1
3,324,224	-				+0.5
3,324,224	-				+0.1
3,324,231	-				+2.7
3,324,231	-				-0.2
3,324,235	+				-3.1
3,324,235	+				-0.3
3,324,235	+				-0.7
3,324,244	+				+1.2
3,324,245	-				+0.7
3,324,253	+				-1.6
3,324,253	+				-0.0
3,324,253	+				+0.7
3,324,254	-				-0.5
3,324,254	-				+2.3
3,324,282	-				+0.5
3,324,296	+				+3.9
3,324,297	-				+0.3
3,324,304	+				+4.5
3,324,305	-				-0.1
3,324,320	-				-1.9
3,324,320	-				-1.3
3,324,332	-				-0.2
3,324,339	+				-0.9
3,324,349	-				+1.0
3,324,369	+				-0.8
3,324,370	-				-0.4
3,324,382	+				+3.1
3,324,383	-				-1.5
3,324,383	-				+0.8
3,324,516	+				+2.3
3,324,517	-				+0.7
3,324,624	+				-0.4
3,324,624	+				-1.1
3,324,624	+				+0.4
3,324,624	+				-2.0
3,324,640	-				+0.7
3,324,640	-				+1.4
3,324,648	+				-1.1
3,324,648	+				-1.7
3,324,721	-		Sama_2782	0.14	-1.5
3,324,721	-		Sama_2782	0.14	+1.0
3,324,721	-		Sama_2782	0.14	+1.0
3,324,721	-		Sama_2782	0.14	-0.7
3,324,721	-		Sama_2782	0.14	+1.4
3,324,721	-		Sama_2782	0.14	-1.5
3,324,725	+		Sama_2782	0.14	-1.3
3,324,725	+		Sama_2782	0.14	-1.1
3,324,725	+		Sama_2782	0.14	-1.5
3,324,725	+		Sama_2782	0.14	+3.2
3,324,726	-		Sama_2782	0.15	-1.1
3,324,726	-		Sama_2782	0.15	+0.1
3,324,726	-		Sama_2782	0.15	+0.7
3,324,770	+		Sama_2782	0.19	+0.7
3,324,771	-		Sama_2782	0.19	+1.6
3,324,772	+		Sama_2782	0.19	-0.2
3,324,772	+		Sama_2782	0.19	+2.6
3,324,772	+		Sama_2782	0.19	+1.1
3,324,772	+		Sama_2782	0.19	-0.2
3,324,772	+		Sama_2782	0.19	-1.7
3,324,772	+		Sama_2782	0.19	-1.7
3,324,773	-		Sama_2782	0.20	-0.9
3,324,773	-		Sama_2782	0.20	-1.5
3,324,773	-		Sama_2782	0.20	-1.7
3,324,773	-		Sama_2782	0.20	+1.2
3,324,773	-		Sama_2782	0.20	+0.4
3,324,773	-		Sama_2782	0.20	-0.2
3,324,773	-		Sama_2782	0.20	+0.4
3,324,773	-		Sama_2782	0.20	-2.5
3,324,773	-		Sama_2782	0.20	+0.3
3,324,773	-		Sama_2782	0.20	+0.2
3,324,773	-		Sama_2782	0.20	-0.0
3,324,773	-		Sama_2782	0.20	-2.3
3,324,773	-		Sama_2782	0.20	-1.7
3,325,112	+		Sama_2782	0.56	-0.6
3,325,112	+		Sama_2782	0.56	+1.1
3,325,113	-		Sama_2782	0.56	+1.9
3,325,113	-		Sama_2782	0.56	+1.6
3,325,156	+		Sama_2782	0.61	+3.2
3,325,172	-		Sama_2782	0.62	-1.7
3,325,172	-		Sama_2782	0.62	-0.1
3,325,172	-		Sama_2782	0.62	+2.1
3,325,172	-		Sama_2782	0.62	-0.2
3,325,300	+		Sama_2782	0.76	+0.1
3,325,301	-		Sama_2782	0.76	-0.4
3,325,301	-		Sama_2782	0.76	+0.1
3,325,301	-		Sama_2782	0.76	-1.5
3,325,330	-		Sama_2782	0.79	+2.0
3,325,330	-		Sama_2782	0.79	-0.1
3,325,330	-		Sama_2782	0.79	+0.1
3,325,422	+		Sama_2782	0.89	-1.8
3,325,423	-		Sama_2782	0.89	+0.2
3,325,437	-				+0.1
3,325,437	-				-1.3
3,325,437	-				-1.1
3,325,477	-				-1.1
3,325,485	+				+3.6
3,325,496	+				-1.1
3,325,497	-				-1.8
3,325,508	+				-2.3
3,325,508	+				-0.0
3,325,508	+				-2.4
3,325,509	-				+0.3
3,325,509	-				+0.2
3,325,521	-				+1.7
3,325,521	-				+3.9
3,325,521	-				+1.9
3,325,534	-				-0.4
3,325,534	-				-0.5
3,325,566	-				+0.8
3,325,609	+				+2.5
3,325,617	+				-0.0
3,325,622	+				+3.1
3,325,665	+				-0.7
3,325,681	-				+3.3
3,325,687	+				-1.0
3,325,687	+				-2.0
3,325,731	+				+1.6
3,325,731	+				-1.6
3,325,732	-				-0.4
3,325,737	+				-2.0
3,325,738	-				-0.7
3,325,770	-				-0.2
3,325,802	+				-0.6
3,325,802	+				+1.2
3,325,818	-				-0.3
3,325,859	+				+3.4
3,325,859	+				+0.5
3,325,860	-				+0.1
3,325,860	-				-0.4
3,325,860	-				-0.9
3,325,880	+				-0.6