Strain Fitness in Shewanella amazonensis SB2B around Sama_2768

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
3,307,515	+				-0.6
3,307,516	-				-2.1
3,307,516	-				+0.3
3,307,560	-				+4.3
3,307,605	-				-0.4
3,307,774	+		Sama_2766	0.55	+0.2
3,307,775	-		Sama_2766	0.55	-2.9
3,307,775	-		Sama_2766	0.55	+0.4
3,307,775	-		Sama_2766	0.55	-0.3
3,307,794	+		Sama_2766	0.63	+2.0
3,307,794	+		Sama_2766	0.63	-1.5
3,307,794	+		Sama_2766	0.63	+1.7
3,307,795	-		Sama_2766	0.63	-1.9
3,307,795	-		Sama_2766	0.63	-0.2
3,307,795	-		Sama_2766	0.63	+0.1
3,307,840	-		Sama_2766	0.81	-0.9
3,307,864	+				-1.2
3,307,864	+				+1.4
3,307,864	+				+0.7
3,307,864	+				-0.1
3,307,864	+				-1.0
3,307,864	+				-0.3
3,307,865	-				+0.1
3,307,865	-				-0.6
3,307,865	-				-2.4
3,307,907	+				+0.5
3,307,907	+				-0.1
3,307,908	-				+0.0
3,307,912	+				-1.1
3,308,031	+		Sama_2767	0.28	+0.0
3,308,031	+		Sama_2767	0.28	-0.3
3,308,031	+		Sama_2767	0.28	+0.2
3,308,031	+		Sama_2767	0.28	-1.1
3,308,031	+		Sama_2767	0.28	+2.2
3,308,032	-		Sama_2767	0.28	-2.3
3,308,032	-		Sama_2767	0.28	+0.6
3,308,032	-		Sama_2767	0.28	+0.4
3,308,032	-		Sama_2767	0.28	-0.9
3,308,032	-		Sama_2767	0.28	-1.1
3,308,032	-		Sama_2767	0.28	-0.9
3,308,032	-		Sama_2767	0.28	+0.7
3,308,032	-		Sama_2767	0.28	+1.1
3,308,032	-		Sama_2767	0.28	-0.3
3,308,032	-		Sama_2767	0.28	+3.7
3,308,032	-		Sama_2767	0.28	+0.4
3,308,063	+		Sama_2767	0.35	-1.5
3,308,064	-		Sama_2767	0.36	+1.7
3,308,064	-		Sama_2767	0.36	+1.1
3,308,098	+		Sama_2767	0.44	-2.1
3,308,278	+		Sama_2767	0.86	-1.0
3,308,278	+		Sama_2767	0.86	-0.2
3,308,278	+		Sama_2767	0.86	+0.7
3,308,278	+		Sama_2767	0.86	+4.6
3,308,278	+		Sama_2767	0.86	-1.1
3,308,278	+		Sama_2767	0.86	-2.9
3,308,278	+		Sama_2767	0.86	-0.4
3,308,279	-		Sama_2767	0.87	+2.1
3,308,279	-		Sama_2767	0.87	+1.4
3,308,322	+				-1.3
3,308,356	+				-0.4
3,308,356	+				-0.9
3,308,414	+				-0.7
3,308,442	+				-2.9
3,308,443	-				+1.8
3,308,469	+				-0.9
3,308,470	-				+1.3
3,308,470	-				+3.1
3,308,470	-				+0.8
3,308,470	-				-0.6
3,308,489	+				-1.1
3,308,489	+				-1.3
3,308,490	-				+0.4
3,308,562	+				+1.7
3,308,562	+				+0.1
3,308,562	+				-1.9
3,308,562	+				+1.1
3,308,563	-				-0.3
3,308,563	-				+1.7
3,308,563	-				-2.0
3,308,565	-				+1.1
3,308,565	-				+0.4
3,308,565	-				+2.1
3,308,575	-				+0.2
3,308,679	+		Sama_2768	0.13	-0.6
3,308,679	+		Sama_2768	0.13	+0.1
3,308,679	+		Sama_2768	0.13	+3.3
3,308,680	-		Sama_2768	0.13	+2.8
3,308,791	+		Sama_2768	0.22	-1.0
3,308,791	+		Sama_2768	0.22	-0.2
3,308,791	+		Sama_2768	0.22	-1.6
3,308,792	-		Sama_2768	0.22	-1.4
3,308,792	-		Sama_2768	0.22	+3.9
3,308,792	-		Sama_2768	0.22	-1.8
3,308,794	+		Sama_2768	0.22	+3.1
3,308,795	-		Sama_2768	0.22	-1.7
3,308,795	-		Sama_2768	0.22	+0.6
3,308,795	-		Sama_2768	0.22	-0.1
3,308,795	-		Sama_2768	0.22	+1.8
3,308,795	-		Sama_2768	0.22	-1.9
3,308,795	-		Sama_2768	0.22	-1.8
3,308,804	+		Sama_2768	0.23	-2.5
3,308,805	-		Sama_2768	0.23	-1.9
3,308,805	-		Sama_2768	0.23	+3.0
3,308,805	-		Sama_2768	0.23	-2.0
3,308,805	-		Sama_2768	0.23	-0.6
3,308,818	+		Sama_2768	0.24	+1.3
3,308,818	+		Sama_2768	0.24	-0.1
3,308,819	-		Sama_2768	0.24	+2.3
3,308,867	+		Sama_2768	0.28	-2.0
3,308,867	+		Sama_2768	0.28	-1.4
3,308,867	+		Sama_2768	0.28	-1.1
3,308,868	-		Sama_2768	0.28	-1.0
3,308,868	-		Sama_2768	0.28	+0.0
3,308,868	-		Sama_2768	0.28	+1.5
3,308,868	-		Sama_2768	0.28	+3.3
3,308,887	-		Sama_2768	0.29	+1.6
3,308,887	-		Sama_2768	0.29	+4.6
3,308,936	-		Sama_2768	0.33	-0.4
3,308,936	-		Sama_2768	0.33	+1.7
3,309,001	-		Sama_2768	0.38	-0.1
3,309,052	+		Sama_2768	0.42	-1.1
3,309,053	-		Sama_2768	0.42	-2.0
3,309,096	+		Sama_2768	0.45	+1.2
3,309,097	-		Sama_2768	0.45	-0.6
3,309,097	-		Sama_2768	0.45	-0.8
3,309,097	-		Sama_2768	0.45	-2.2
3,309,116	+		Sama_2768	0.47	+0.1
3,309,117	-		Sama_2768	0.47	-1.5
3,309,117	-		Sama_2768	0.47	+0.5
3,309,117	-		Sama_2768	0.47	-1.6
3,309,117	-		Sama_2768	0.47	-1.5
3,309,117	-		Sama_2768	0.47	-1.5
3,309,117	-		Sama_2768	0.47	-0.2
3,309,126	+		Sama_2768	0.48	+0.9
3,309,126	+		Sama_2768	0.48	-1.3
3,309,126	+		Sama_2768	0.48	-1.1
3,309,126	+		Sama_2768	0.48	-1.5
3,309,127	-		Sama_2768	0.48	-2.1
3,309,127	-		Sama_2768	0.48	-2.4
3,309,127	-		Sama_2768	0.48	-1.5
3,309,136	-		Sama_2768	0.48	+1.1
3,309,153	+		Sama_2768	0.50	-1.3
3,309,153	+		Sama_2768	0.50	-1.6
3,309,153	+		Sama_2768	0.50	+1.3
3,309,153	+		Sama_2768	0.50	-0.3
3,309,153	+		Sama_2768	0.50	+3.2
3,309,154	-		Sama_2768	0.50	+1.9
3,309,154	-		Sama_2768	0.50	+0.2
3,309,154	-		Sama_2768	0.50	+0.7
3,309,154	-		Sama_2768	0.50	-2.5
3,309,154	-		Sama_2768	0.50	+1.2
3,309,165	-		Sama_2768	0.51	-2.4
3,309,165	-		Sama_2768	0.51	-1.9
3,309,165	-		Sama_2768	0.51	-1.9
3,309,196	+		Sama_2768	0.53	-1.8
3,309,196	+		Sama_2768	0.53	-2.0
3,309,197	-		Sama_2768	0.53	+1.8
3,309,197	-		Sama_2768	0.53	+1.7
3,309,197	-		Sama_2768	0.53	-1.6
3,309,197	-		Sama_2768	0.53	-0.9
3,309,237	+		Sama_2768	0.56	-1.8
3,309,238	-		Sama_2768	0.56	-1.5
3,309,238	-		Sama_2768	0.56	+2.5
3,309,239	+		Sama_2768	0.56	-2.1
3,309,239	+		Sama_2768	0.56	-0.6
3,309,239	+		Sama_2768	0.56	-1.6
3,309,239	+		Sama_2768	0.56	+0.8
3,309,239	+		Sama_2768	0.56	-0.9
3,309,239	+		Sama_2768	0.56	-1.1
3,309,239	+		Sama_2768	0.56	-2.8
3,309,239	+		Sama_2768	0.56	-1.5
3,309,239	+		Sama_2768	0.56	-1.0
3,309,239	+		Sama_2768	0.56	-1.9
3,309,239	+		Sama_2768	0.56	+0.7
3,309,240	-		Sama_2768	0.57	+0.5
3,309,240	-		Sama_2768	0.57	-2.1
3,309,240	-		Sama_2768	0.57	-0.6
3,309,240	-		Sama_2768	0.57	-1.5
3,309,240	-		Sama_2768	0.57	-2.0
3,309,240	-		Sama_2768	0.57	+3.3
3,309,240	-		Sama_2768	0.57	-1.7
3,309,240	-		Sama_2768	0.57	+0.5
3,309,240	-		Sama_2768	0.57	-2.1
3,309,240	-		Sama_2768	0.57	-1.3
3,309,240	-		Sama_2768	0.57	+1.9
3,309,240	-		Sama_2768	0.57	+4.0
3,309,282	+		Sama_2768	0.60	-0.8
3,309,331	+		Sama_2768	0.64	+1.4
3,309,331	+		Sama_2768	0.64	-0.2
3,309,343	+		Sama_2768	0.65	-0.9
3,309,388	+		Sama_2768	0.68	+0.1
3,309,388	+		Sama_2768	0.68	-1.2
3,309,388	+		Sama_2768	0.68	-0.6
3,309,388	+		Sama_2768	0.68	-0.8
3,309,388	+		Sama_2768	0.68	-0.3
3,309,389	-		Sama_2768	0.68	-2.8
3,309,389	-		Sama_2768	0.68	+0.3
3,309,389	-		Sama_2768	0.68	+0.9
3,309,389	-		Sama_2768	0.68	+0.5
3,309,389	-		Sama_2768	0.68	-2.9
3,309,389	-		Sama_2768	0.68	-1.9
3,309,389	-		Sama_2768	0.68	+2.2
3,309,397	-		Sama_2768	0.69	-1.1
3,309,397	-		Sama_2768	0.69	-1.4
3,309,495	+		Sama_2768	0.76	+0.5
3,309,495	+		Sama_2768	0.76	-1.0
3,309,496	-		Sama_2768	0.76	-1.7
3,309,533	+		Sama_2768	0.79	-2.3
3,309,534	-		Sama_2768	0.79	-2.0
3,309,549	+		Sama_2768	0.80	-2.8
3,309,591	+		Sama_2768	0.84	-1.3
3,309,591	+		Sama_2768	0.84	-0.1
3,309,591	+		Sama_2768	0.84	+0.2
3,309,592	-		Sama_2768	0.84	-1.2
3,309,592	-		Sama_2768	0.84	+0.3
3,309,616	+		Sama_2768	0.86	+1.8
3,309,617	-		Sama_2768	0.86	-0.9
3,309,628	+		Sama_2768	0.87	-0.3
3,309,629	-		Sama_2768	0.87	-1.6
3,309,649	+		Sama_2768	0.88	-1.4
3,309,650	-		Sama_2768	0.88	-1.0
3,309,650	-		Sama_2768	0.88	+0.3
3,309,650	-		Sama_2768	0.88	+0.6
3,309,650	-		Sama_2768	0.88	+1.2
3,309,664	+		Sama_2768	0.89	-1.5
3,309,664	+		Sama_2768	0.89	-0.3
3,309,714	+				-1.6
3,309,715	-				+0.7
3,309,726	+				+0.9
3,309,792	+				-0.5
3,309,811	+				-1.0
3,309,811	+				+0.6
3,309,836	+				+3.0
3,309,836	+				-1.4
3,309,836	+				-0.6
3,309,837	-				+4.1
3,309,837	-				-0.4
3,309,837	-				+2.1
3,309,837	-				+0.4
3,309,837	-				-0.3
3,309,840	+				+3.7
3,309,840	+				+0.1
3,309,840	+				-0.4
3,309,840	+				+0.6
3,309,841	-				-2.9
3,309,841	-				-0.5
3,309,883	-				-0.2
3,309,886	-				-0.6
3,309,886	-				-0.3
3,309,927	+				+1.8
3,309,927	+				+0.3
3,309,928	-				+0.9
3,309,982	+		Sama_2769	0.15	+2.7
3,309,982	+		Sama_2769	0.15	-1.7
3,309,982	+		Sama_2769	0.15	+0.1
3,309,983	-		Sama_2769	0.15	+2.3
3,310,018	+		Sama_2769	0.27	+1.4
3,310,019	-		Sama_2769	0.27	-1.8
3,310,019	-		Sama_2769	0.27	-0.6
3,310,019	-		Sama_2769	0.27	+0.1
3,310,019	-		Sama_2769	0.27	+1.1
3,310,027	+		Sama_2769	0.30	-1.4
3,310,028	-		Sama_2769	0.30	-0.9
3,310,028	-		Sama_2769	0.30	+0.1
3,310,050	+		Sama_2769	0.37	-1.1
3,310,051	-		Sama_2769	0.38	-0.5
3,310,051	-		Sama_2769	0.38	+2.0
3,310,051	-		Sama_2769	0.38	-1.7
3,310,051	-		Sama_2769	0.38	-1.5
3,310,051	-		Sama_2769	0.38	-0.3
3,310,051	-		Sama_2769	0.38	+0.2
3,310,051	-		Sama_2769	0.38	+1.2
3,310,079	+		Sama_2769	0.47	-0.8
3,310,080	-		Sama_2769	0.47	-1.1
3,310,084	+		Sama_2769	0.48	+1.2
3,310,084	+		Sama_2769	0.48	-2.5
3,310,084	+		Sama_2769	0.48	-1.3
3,310,084	+		Sama_2769	0.48	+1.1
3,310,084	+		Sama_2769	0.48	-3.4
3,310,085	-		Sama_2769	0.49	+1.2
3,310,085	-		Sama_2769	0.49	+1.4
3,310,171	+		Sama_2769	0.77	-0.7
3,310,171	+		Sama_2769	0.77	-0.2
3,310,172	-		Sama_2769	0.77	-1.3
3,310,173	+		Sama_2769	0.77	-0.4
3,310,173	+		Sama_2769	0.77	+1.9
3,310,174	-		Sama_2769	0.78	-0.3
3,310,174	-		Sama_2769	0.78	+1.1
3,310,181	+		Sama_2769	0.80	-0.6
3,310,181	+		Sama_2769	0.80	-1.1
3,310,200	-		Sama_2769	0.86	+1.0
3,310,264	+				-3.3
3,310,264	+				-2.0
3,310,264	+				-0.9
3,310,265	-				-0.5
3,310,265	-				+0.1
3,310,265	-				+2.4
3,310,265	-				+0.3
3,310,276	+				+2.8
3,310,277	-				-0.9
3,310,277	-				-0.7
3,310,277	-				+0.8
3,310,277	-				-0.1
3,310,280	+				-0.9
3,310,280	+				-2.6
3,310,280	+				-0.3
3,310,280	+				-0.5
3,310,280	+				-0.3
3,310,280	+				-0.9
3,310,280	+				+0.7
3,310,280	+				-1.5
3,310,280	+				+1.3
3,310,280	+				-0.8
3,310,280	+				+1.7
3,310,280	+				+0.2
3,310,280	+				-0.6
3,310,280	+				+0.1
3,310,280	+				+3.1
3,310,280	+				+1.9
3,310,280	+				+0.8
3,310,280	+				+1.7
3,310,280	+				-1.5
3,310,280	+				-0.2
3,310,281	-				-0.3
3,310,281	-				-2.1
3,310,281	-				-0.5
3,310,281	-				-2.0
3,310,281	-				+3.5
3,310,281	-				-1.1
3,310,281	-				-0.1
3,310,281	-				-0.1
3,310,281	-				-3.2
3,310,281	-				-2.7
3,310,281	-				+0.1
3,310,281	-				+1.1
3,310,281	-				+0.9
3,310,281	-				-0.6
3,310,281	-				+1.7
3,310,281	-				+0.1
3,310,281	-				+1.0
3,310,286	+				-0.3
3,310,286	+				-1.8
3,310,286	+				+0.4
3,310,287	-				+0.7
3,310,330	+				-1.5
3,310,360	+				-0.9
3,310,360	+				+2.1
3,310,361	-				-1.2
3,310,361	-				-0.5
3,310,361	-				+0.4
3,310,433	-				-2.9
3,310,440	+				+4.2
3,310,440	+				+0.2
3,310,451	+				-2.1
3,310,451	+				-0.6
3,310,451	+				-2.4
3,310,452	-				-0.8
3,310,452	-				-2.5
3,310,452	-				-1.1
3,310,452	-				-1.5
3,310,456	+				+0.4
3,310,456	+				+0.8
3,310,474	-				+1.0
3,310,495	+				+3.9
3,310,495	+				-1.4
3,310,495	+				-0.6
3,310,495	+				-1.5
3,310,495	+				+1.1
3,310,495	+				+1.7
3,310,496	-				-0.0
3,310,496	-				-2.6
3,310,496	-				+1.3
3,310,496	-				-1.4
3,310,496	-				+2.2
3,310,496	-				+0.4
3,310,496	-				-0.3
3,310,496	-				+1.1
3,310,519	+				-2.2
3,310,520	-				-2.1
3,310,527	-				-0.7
3,310,538	+		Sama_2770	0.11	-0.8
3,310,570	+		Sama_2770	0.18	+0.5
3,310,571	-		Sama_2770	0.18	-1.2
3,310,639	-		Sama_2770	0.33	+1.5
3,310,639	-		Sama_2770	0.33	+0.8
3,310,719	+		Sama_2770	0.51	-0.9
3,310,719	+		Sama_2770	0.51	-0.9
3,310,719	+		Sama_2770	0.51	-0.6
3,310,719	+		Sama_2770	0.51	-1.6
3,310,720	-		Sama_2770	0.51	-1.0
3,310,720	-		Sama_2770	0.51	-1.9
3,310,723	-		Sama_2770	0.52	-0.6
3,310,740	+		Sama_2770	0.56	-1.1
3,310,740	+		Sama_2770	0.56	+3.8
3,310,740	+		Sama_2770	0.56	-1.5
3,310,740	+		Sama_2770	0.56	-0.3
3,310,740	+		Sama_2770	0.56	+2.3
3,310,740	+		Sama_2770	0.56	+0.7
3,310,740	+		Sama_2770	0.56	-2.7
3,310,740	+		Sama_2770	0.56	+1.4
3,310,740	+		Sama_2770	0.56	-0.3
3,310,740	+		Sama_2770	0.56	+5.4
3,310,741	-		Sama_2770	0.56	-1.7
3,310,741	-		Sama_2770	0.56	+2.8
3,310,741	-		Sama_2770	0.56	-0.5
3,310,741	-		Sama_2770	0.56	-1.1
3,310,741	-		Sama_2770	0.56	-0.4
3,310,741	-		Sama_2770	0.56	-0.5
3,310,741	-		Sama_2770	0.56	-0.1
3,310,742	+		Sama_2770	0.56	-0.2
3,310,743	-		Sama_2770	0.56	-0.6
3,310,743	-		Sama_2770	0.56	-0.5
3,310,743	-		Sama_2770	0.56	-0.5
3,310,773	+		Sama_2770	0.63	+3.9
3,310,773	+		Sama_2770	0.63	-0.3
3,310,774	-		Sama_2770	0.63	+0.4
3,310,774	-		Sama_2770	0.63	-0.5
3,310,774	-		Sama_2770	0.63	+0.7
3,310,774	-		Sama_2770	0.63	-2.4
3,310,785	+		Sama_2770	0.66	+0.1