Experiment: Cisplatin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Sama_2606 and Sama_R0113 are separated by 302 nucleotides Sama_R0113 and Sama_R0114 are separated by 52 nucleotides Sama_R0114 and Sama_R0115 are separated by 37 nucleotides Sama_R0115 and Sama_R0116 are separated by 30 nucleotides Sama_R0116 and Sama_2607 are separated by 151 nucleotides
Sama_2606: Sama_2606 - putative lipoprotein (RefSeq), at 3,119,410 to 3,120,261
_2606
Sama_R0113: Sama_R0113 - tRNA-Phe (RefSeq), at 3,120,564 to 3,120,639
_R0113
Sama_R0114: Sama_R0114 - tRNA-Leu (RefSeq), at 3,120,692 to 3,120,778
_R0114
Sama_R0115: Sama_R0115 - tRNA-Leu (RefSeq), at 3,120,816 to 3,120,902
_R0115
Sama_R0116: Sama_R0116 - tRNA-Leu (RefSeq), at 3,120,933 to 3,121,019
_R0116
Sama_2607: Sama_2607 - putative methyl-accepting chemotaxis sensory transducer (RefSeq), at 3,121,171 to 3,122,796
_2607
Position (kb) 3120
3121 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6 at 3120.259 kb on + strand at 3120.279 kb on + strand at 3120.292 kb on + strand at 3120.292 kb on + strand at 3120.293 kb on - strand at 3120.320 kb on - strand at 3120.358 kb on + strand at 3120.358 kb on + strand at 3120.359 kb on - strand at 3120.359 kb on - strand at 3120.381 kb on - strand at 3120.381 kb on - strand at 3120.381 kb on - strand at 3120.382 kb on + strand at 3120.382 kb on + strand at 3120.383 kb on - strand at 3120.406 kb on + strand at 3120.406 kb on + strand at 3120.407 kb on - strand at 3120.407 kb on - strand at 3120.407 kb on - strand at 3120.427 kb on + strand at 3120.428 kb on - strand at 3120.428 kb on - strand at 3120.790 kb on + strand at 3120.790 kb on + strand at 3120.790 kb on + strand at 3120.790 kb on + strand at 3120.790 kb on + strand at 3120.790 kb on + strand at 3120.790 kb on + strand at 3120.794 kb on + strand at 3120.794 kb on + strand at 3120.794 kb on + strand at 3120.794 kb on + strand at 3120.794 kb on + strand at 3120.794 kb on + strand at 3120.800 kb on + strand at 3120.800 kb on + strand at 3120.905 kb on + strand at 3120.905 kb on + strand at 3120.921 kb on + strand at 3120.927 kb on + strand at 3120.927 kb on + strand at 3120.927 kb on + strand at 3120.983 kb on + strand, within Sama_R0116 at 3120.983 kb on + strand, within Sama_R0116 at 3121.015 kb on + strand at 3121.026 kb on + strand at 3121.026 kb on + strand at 3121.026 kb on + strand at 3121.059 kb on + strand at 3121.059 kb on + strand at 3121.060 kb on - strand at 3121.060 kb on - strand at 3121.062 kb on + strand at 3121.091 kb on + strand at 3121.091 kb on + strand at 3121.092 kb on - strand at 3121.093 kb on + strand at 3121.093 kb on + strand at 3121.093 kb on + strand at 3121.093 kb on + strand at 3121.094 kb on - strand at 3121.094 kb on - strand at 3121.094 kb on - strand at 3121.097 kb on + strand at 3121.097 kb on + strand at 3121.097 kb on + strand at 3121.097 kb on + strand at 3121.097 kb on + strand at 3121.097 kb on + strand at 3121.097 kb on + strand at 3121.097 kb on + strand at 3121.097 kb on + strand at 3121.097 kb on + strand at 3121.097 kb on + strand at 3121.097 kb on + strand at 3121.097 kb on + strand at 3121.098 kb on - strand at 3121.098 kb on - strand at 3121.098 kb on - strand at 3121.098 kb on - strand at 3121.098 kb on - strand at 3121.098 kb on - strand at 3121.098 kb on - strand at 3121.098 kb on - strand at 3121.099 kb on + strand at 3121.099 kb on + strand at 3121.099 kb on + strand at 3121.099 kb on + strand at 3121.099 kb on + strand at 3121.099 kb on + strand at 3121.100 kb on - strand at 3121.100 kb on - strand at 3121.100 kb on - strand at 3121.100 kb on - strand at 3121.100 kb on - strand at 3121.100 kb on - strand at 3121.103 kb on + strand at 3121.103 kb on + strand at 3121.104 kb on - strand at 3121.104 kb on - strand at 3121.260 kb on + strand at 3121.260 kb on + strand at 3121.260 kb on + strand at 3121.261 kb on - strand at 3121.261 kb on - strand at 3121.261 kb on - strand at 3121.261 kb on - strand at 3121.274 kb on + strand at 3121.274 kb on + strand at 3121.274 kb on + strand at 3121.297 kb on + strand at 3121.298 kb on - strand at 3121.298 kb on - strand at 3121.298 kb on - strand at 3121.299 kb on + strand at 3121.335 kb on + strand, within Sama_2607 at 3121.377 kb on + strand, within Sama_2607 at 3121.377 kb on + strand, within Sama_2607 at 3121.378 kb on - strand, within Sama_2607 at 3121.378 kb on - strand, within Sama_2607 at 3121.427 kb on + strand, within Sama_2607 at 3121.428 kb on - strand, within Sama_2607 at 3121.428 kb on - strand, within Sama_2607 at 3121.434 kb on + strand, within Sama_2607 at 3121.435 kb on - strand, within Sama_2607 at 3121.435 kb on - strand, within Sama_2607 at 3121.443 kb on + strand, within Sama_2607 at 3121.445 kb on + strand, within Sama_2607 at 3121.445 kb on + strand, within Sama_2607 at 3121.446 kb on - strand, within Sama_2607 at 3121.446 kb on - strand, within Sama_2607 at 3121.465 kb on + strand, within Sama_2607 at 3121.465 kb on + strand, within Sama_2607 at 3121.465 kb on + strand, within Sama_2607 at 3121.465 kb on + strand, within Sama_2607 at 3121.465 kb on + strand, within Sama_2607 at 3121.465 kb on + strand, within Sama_2607 at 3121.465 kb on + strand, within Sama_2607 at 3121.465 kb on + strand, within Sama_2607 at 3121.465 kb on + strand, within Sama_2607 at 3121.465 kb on + strand, within Sama_2607 at 3121.465 kb on + strand, within Sama_2607 at 3121.465 kb on + strand, within Sama_2607 at 3121.465 kb on + strand, within Sama_2607 at 3121.465 kb on + strand, within Sama_2607 at 3121.465 kb on + strand, within Sama_2607 at 3121.465 kb on + strand, within Sama_2607 at 3121.465 kb on + strand, within Sama_2607 at 3121.465 kb on + strand, within Sama_2607 at 3121.465 kb on + strand, within Sama_2607 at 3121.465 kb on + strand, within Sama_2607 at 3121.466 kb on - strand, within Sama_2607 at 3121.466 kb on - strand, within Sama_2607 at 3121.466 kb on - strand, within Sama_2607 at 3121.466 kb on - strand, within Sama_2607 at 3121.466 kb on - strand, within Sama_2607 at 3121.466 kb on - strand, within Sama_2607 at 3121.466 kb on - strand, within Sama_2607 at 3121.466 kb on - strand, within Sama_2607 at 3121.466 kb on - strand, within Sama_2607 at 3121.466 kb on - strand, within Sama_2607 at 3121.466 kb on - strand, within Sama_2607 at 3121.466 kb on - strand, within Sama_2607 at 3121.466 kb on - strand, within Sama_2607 at 3121.466 kb on - strand, within Sama_2607 at 3121.466 kb on - strand, within Sama_2607 at 3121.466 kb on - strand, within Sama_2607 at 3121.466 kb on - strand, within Sama_2607 at 3121.466 kb on - strand, within Sama_2607 at 3121.466 kb on - strand, within Sama_2607 at 3121.466 kb on - strand, within Sama_2607 at 3121.466 kb on - strand, within Sama_2607 at 3121.467 kb on + strand, within Sama_2607 at 3121.467 kb on + strand, within Sama_2607 at 3121.467 kb on + strand, within Sama_2607 at 3121.467 kb on + strand, within Sama_2607 at 3121.467 kb on + strand, within Sama_2607 at 3121.467 kb on + strand, within Sama_2607 at 3121.467 kb on + strand, within Sama_2607 at 3121.467 kb on + strand, within Sama_2607 at 3121.467 kb on + strand, within Sama_2607 at 3121.467 kb on + strand, within Sama_2607 at 3121.467 kb on + strand, within Sama_2607 at 3121.467 kb on + strand, within Sama_2607 at 3121.467 kb on + strand, within Sama_2607 at 3121.467 kb on + strand, within Sama_2607 at 3121.467 kb on + strand, within Sama_2607 at 3121.467 kb on + strand, within Sama_2607 at 3121.467 kb on + strand, within Sama_2607 at 3121.467 kb on + strand, within Sama_2607 at 3121.467 kb on + strand, within Sama_2607 at 3121.467 kb on + strand, within Sama_2607 at 3121.467 kb on + strand, within Sama_2607 at 3121.467 kb on + strand, within Sama_2607 at 3121.467 kb on + strand, within Sama_2607 at 3121.468 kb on - strand, within Sama_2607 at 3121.468 kb on - strand, within Sama_2607 at 3121.468 kb on - strand, within Sama_2607 at 3121.468 kb on - strand, within Sama_2607 at 3121.468 kb on - strand, within Sama_2607 at 3121.468 kb on - strand, within Sama_2607 at 3121.468 kb on - strand, within Sama_2607 at 3121.468 kb on - strand, within Sama_2607 at 3121.468 kb on - strand, within Sama_2607 at 3121.468 kb on - strand, within Sama_2607 at 3121.468 kb on - strand, within Sama_2607 at 3121.468 kb on - strand, within Sama_2607 at 3121.468 kb on - strand, within Sama_2607 at 3121.468 kb on - strand, within Sama_2607 at 3121.468 kb on - strand, within Sama_2607 at 3121.523 kb on + strand, within Sama_2607 at 3121.523 kb on + strand, within Sama_2607 at 3121.524 kb on - strand, within Sama_2607 at 3121.524 kb on - strand, within Sama_2607 at 3121.524 kb on - strand, within Sama_2607 at 3121.553 kb on + strand, within Sama_2607 at 3121.554 kb on - strand, within Sama_2607 at 3121.554 kb on - strand, within Sama_2607 at 3121.554 kb on - strand, within Sama_2607 at 3121.611 kb on + strand, within Sama_2607 at 3121.611 kb on + strand, within Sama_2607 at 3121.612 kb on - strand, within Sama_2607 at 3121.631 kb on + strand, within Sama_2607 at 3121.632 kb on - strand, within Sama_2607 at 3121.632 kb on - strand, within Sama_2607 at 3121.634 kb on + strand, within Sama_2607 at 3121.634 kb on + strand, within Sama_2607 at 3121.634 kb on + strand, within Sama_2607 at 3121.634 kb on + strand, within Sama_2607 at 3121.634 kb on + strand, within Sama_2607 at 3121.634 kb on + strand, within Sama_2607 at 3121.634 kb on + strand, within Sama_2607 at 3121.634 kb on + strand, within Sama_2607 at 3121.635 kb on - strand, within Sama_2607 at 3121.635 kb on - strand, within Sama_2607 at 3121.635 kb on - strand, within Sama_2607 at 3121.635 kb on - strand, within Sama_2607 at 3121.635 kb on - strand, within Sama_2607 at 3121.635 kb on - strand, within Sama_2607 at 3121.635 kb on - strand, within Sama_2607 at 3121.635 kb on - strand, within Sama_2607 at 3121.635 kb on - strand, within Sama_2607 at 3121.709 kb on + strand, within Sama_2607 at 3121.718 kb on + strand, within Sama_2607 at 3121.719 kb on - strand, within Sama_2607 at 3121.808 kb on + strand, within Sama_2607 at 3121.808 kb on + strand, within Sama_2607 at 3121.808 kb on + strand, within Sama_2607 at 3121.881 kb on + strand, within Sama_2607 at 3121.882 kb on - strand, within Sama_2607
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.01 mg/ml remove 3,120,259 + -0.8 3,120,279 + -0.1 3,120,292 + +0.1 3,120,292 + -1.1 3,120,293 - +0.7 3,120,320 - +0.4 3,120,358 + -1.6 3,120,358 + -1.2 3,120,359 - -0.6 3,120,359 - +0.3 3,120,381 - -2.6 3,120,381 - -1.3 3,120,381 - -1.5 3,120,382 + +2.1 3,120,382 + -0.3 3,120,383 - -1.3 3,120,406 + +0.1 3,120,406 + +0.8 3,120,407 - -1.2 3,120,407 - -1.1 3,120,407 - +0.5 3,120,427 + -0.3 3,120,428 - -0.3 3,120,428 - -2.7 3,120,790 + +0.4 3,120,790 + +1.0 3,120,790 + +3.2 3,120,790 + +0.7 3,120,790 + +3.2 3,120,790 + +2.7 3,120,790 + +0.1 3,120,794 + +0.1 3,120,794 + +5.2 3,120,794 + +0.8 3,120,794 + -2.2 3,120,794 + -1.5 3,120,794 + +2.9 3,120,800 + -2.0 3,120,800 + -0.0 3,120,905 + -1.1 3,120,905 + -0.9 3,120,921 + +2.2 3,120,927 + -0.3 3,120,927 + -2.1 3,120,927 + -1.8 3,120,983 + Sama_R0116 0.57 -0.7 3,120,983 + Sama_R0116 0.57 -1.1 3,121,015 + +1.2 3,121,026 + -0.3 3,121,026 + +1.5 3,121,026 + +0.1 3,121,059 + -0.6 3,121,059 + +0.1 3,121,060 - -1.7 3,121,060 - +2.9 3,121,062 + -0.3 3,121,091 + +0.4 3,121,091 + +3.4 3,121,092 - +0.2 3,121,093 + -0.6 3,121,093 + +0.5 3,121,093 + -2.1 3,121,093 + -0.3 3,121,094 - +0.7 3,121,094 - +0.0 3,121,094 - +0.6 3,121,097 + -0.6 3,121,097 + +0.2 3,121,097 + -1.9 3,121,097 + -2.6 3,121,097 + -2.2 3,121,097 + -1.3 3,121,097 + -0.9 3,121,097 + +0.7 3,121,097 + -1.0 3,121,097 + -0.8 3,121,097 + -1.3 3,121,097 + -1.1 3,121,097 + -1.2 3,121,098 - -0.4 3,121,098 - -2.0 3,121,098 - -0.2 3,121,098 - +0.4 3,121,098 - +1.1 3,121,098 - -0.3 3,121,098 - +1.3 3,121,098 - +1.7 3,121,099 + +1.9 3,121,099 + +0.4 3,121,099 + -1.0 3,121,099 + -0.9 3,121,099 + -0.3 3,121,099 + -1.5 3,121,100 - -3.0 3,121,100 - +0.7 3,121,100 - -0.3 3,121,100 - +1.0 3,121,100 - -0.6 3,121,100 - +2.6 3,121,103 + -1.7 3,121,103 + -1.2 3,121,104 - -2.2 3,121,104 - +1.7 3,121,260 + +1.6 3,121,260 + -2.0 3,121,260 + +0.4 3,121,261 - -1.4 3,121,261 - -1.1 3,121,261 - -0.2 3,121,261 - +0.7 3,121,274 + -0.3 3,121,274 + +5.8 3,121,274 + -1.5 3,121,297 + +2.3 3,121,298 - -0.6 3,121,298 - +1.4 3,121,298 - +3.1 3,121,299 + -2.6 3,121,335 + Sama_2607 0.10 -0.9 3,121,377 + Sama_2607 0.13 -0.4 3,121,377 + Sama_2607 0.13 +0.1 3,121,378 - Sama_2607 0.13 -0.9 3,121,378 - Sama_2607 0.13 -0.4 3,121,427 + Sama_2607 0.16 -1.1 3,121,428 - Sama_2607 0.16 -0.3 3,121,428 - Sama_2607 0.16 -3.5 3,121,434 + Sama_2607 0.16 -2.8 3,121,435 - Sama_2607 0.16 -0.8 3,121,435 - Sama_2607 0.16 +2.4 3,121,443 + Sama_2607 0.17 -0.8 3,121,445 + Sama_2607 0.17 -2.1 3,121,445 + Sama_2607 0.17 +1.0 3,121,446 - Sama_2607 0.17 +1.9 3,121,446 - Sama_2607 0.17 -0.2 3,121,465 + Sama_2607 0.18 -1.8 3,121,465 + Sama_2607 0.18 +1.0 3,121,465 + Sama_2607 0.18 +0.1 3,121,465 + Sama_2607 0.18 -0.3 3,121,465 + Sama_2607 0.18 +2.4 3,121,465 + Sama_2607 0.18 -0.6 3,121,465 + Sama_2607 0.18 +0.4 3,121,465 + Sama_2607 0.18 +0.2 3,121,465 + Sama_2607 0.18 -1.6 3,121,465 + Sama_2607 0.18 +0.1 3,121,465 + Sama_2607 0.18 +0.4 3,121,465 + Sama_2607 0.18 +1.1 3,121,465 + Sama_2607 0.18 -1.5 3,121,465 + Sama_2607 0.18 -0.3 3,121,465 + Sama_2607 0.18 -2.2 3,121,465 + Sama_2607 0.18 -0.3 3,121,465 + Sama_2607 0.18 +1.3 3,121,465 + Sama_2607 0.18 +2.7 3,121,465 + Sama_2607 0.18 +0.1 3,121,465 + Sama_2607 0.18 -0.6 3,121,466 - Sama_2607 0.18 +3.8 3,121,466 - Sama_2607 0.18 -0.3 3,121,466 - Sama_2607 0.18 +0.1 3,121,466 - Sama_2607 0.18 -2.8 3,121,466 - Sama_2607 0.18 -2.6 3,121,466 - Sama_2607 0.18 +0.4 3,121,466 - Sama_2607 0.18 -0.1 3,121,466 - Sama_2607 0.18 -0.6 3,121,466 - Sama_2607 0.18 +1.0 3,121,466 - Sama_2607 0.18 +1.5 3,121,466 - Sama_2607 0.18 +0.5 3,121,466 - Sama_2607 0.18 +1.7 3,121,466 - Sama_2607 0.18 -0.6 3,121,466 - Sama_2607 0.18 +4.7 3,121,466 - Sama_2607 0.18 -1.8 3,121,466 - Sama_2607 0.18 -1.3 3,121,466 - Sama_2607 0.18 -0.1 3,121,466 - Sama_2607 0.18 -2.5 3,121,466 - Sama_2607 0.18 -0.5 3,121,466 - Sama_2607 0.18 -1.6 3,121,466 - Sama_2607 0.18 -1.5 3,121,467 + Sama_2607 0.18 +2.4 3,121,467 + Sama_2607 0.18 +1.7 3,121,467 + Sama_2607 0.18 +3.9 3,121,467 + Sama_2607 0.18 -1.1 3,121,467 + Sama_2607 0.18 +1.0 3,121,467 + Sama_2607 0.18 +0.5 3,121,467 + Sama_2607 0.18 -3.2 3,121,467 + Sama_2607 0.18 +0.7 3,121,467 + Sama_2607 0.18 +0.7 3,121,467 + Sama_2607 0.18 -2.8 3,121,467 + Sama_2607 0.18 +5.2 3,121,467 + Sama_2607 0.18 +0.1 3,121,467 + Sama_2607 0.18 +0.7 3,121,467 + Sama_2607 0.18 -2.1 3,121,467 + Sama_2607 0.18 -0.6 3,121,467 + Sama_2607 0.18 -0.9 3,121,467 + Sama_2607 0.18 -1.3 3,121,467 + Sama_2607 0.18 +0.4 3,121,467 + Sama_2607 0.18 +1.5 3,121,467 + Sama_2607 0.18 +2.1 3,121,467 + Sama_2607 0.18 +0.5 3,121,467 + Sama_2607 0.18 +0.7 3,121,467 + Sama_2607 0.18 +2.6 3,121,468 - Sama_2607 0.18 +0.4 3,121,468 - Sama_2607 0.18 -0.6 3,121,468 - Sama_2607 0.18 -1.9 3,121,468 - Sama_2607 0.18 +0.1 3,121,468 - Sama_2607 0.18 -0.9 3,121,468 - Sama_2607 0.18 -1.3 3,121,468 - Sama_2607 0.18 +0.1 3,121,468 - Sama_2607 0.18 +1.8 3,121,468 - Sama_2607 0.18 -2.8 3,121,468 - Sama_2607 0.18 -1.5 3,121,468 - Sama_2607 0.18 +1.5 3,121,468 - Sama_2607 0.18 -0.4 3,121,468 - Sama_2607 0.18 -1.0 3,121,468 - Sama_2607 0.18 -0.2 3,121,468 - Sama_2607 0.18 -2.4 3,121,523 + Sama_2607 0.22 +1.1 3,121,523 + Sama_2607 0.22 -1.5 3,121,524 - Sama_2607 0.22 +3.5 3,121,524 - Sama_2607 0.22 -1.5 3,121,524 - Sama_2607 0.22 -1.1 3,121,553 + Sama_2607 0.23 +0.5 3,121,554 - Sama_2607 0.24 +0.7 3,121,554 - Sama_2607 0.24 -0.8 3,121,554 - Sama_2607 0.24 +2.4 3,121,611 + Sama_2607 0.27 -1.0 3,121,611 + Sama_2607 0.27 -2.0 3,121,612 - Sama_2607 0.27 -0.1 3,121,631 + Sama_2607 0.28 +0.1 3,121,632 - Sama_2607 0.28 +0.1 3,121,632 - Sama_2607 0.28 +0.1 3,121,634 + Sama_2607 0.28 +1.3 3,121,634 + Sama_2607 0.28 +2.6 3,121,634 + Sama_2607 0.28 +4.7 3,121,634 + Sama_2607 0.28 +1.7 3,121,634 + Sama_2607 0.28 -2.0 3,121,634 + Sama_2607 0.28 +3.4 3,121,634 + Sama_2607 0.28 +0.8 3,121,634 + Sama_2607 0.28 -1.3 3,121,635 - Sama_2607 0.29 +2.9 3,121,635 - Sama_2607 0.29 -0.2 3,121,635 - Sama_2607 0.29 +1.7 3,121,635 - Sama_2607 0.29 -2.6 3,121,635 - Sama_2607 0.29 -1.5 3,121,635 - Sama_2607 0.29 +1.0 3,121,635 - Sama_2607 0.29 -0.6 3,121,635 - Sama_2607 0.29 +2.2 3,121,635 - Sama_2607 0.29 -0.3 3,121,709 + Sama_2607 0.33 +1.1 3,121,718 + Sama_2607 0.34 -1.0 3,121,719 - Sama_2607 0.34 +1.3 3,121,808 + Sama_2607 0.39 -1.1 3,121,808 + Sama_2607 0.39 -1.4 3,121,808 + Sama_2607 0.39 -0.1 3,121,881 + Sama_2607 0.44 -0.3 3,121,882 - Sama_2607 0.44 -1.1
Or see this region's nucleotide sequence