Strain Fitness in Shewanella amazonensis SB2B around Sama_2497

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
2,996,792	+		Sama_2495	0.87	-1.5
2,996,912	+				-0.2
2,996,913	-				-1.5
2,996,913	-				+1.9
2,996,913	-				-1.4
2,996,971	+				+0.4
2,996,971	+				+0.1
2,996,971	+				+0.1
2,996,971	+				-1.7
2,996,975	-		Sama_2496	0.10	-0.4
2,996,982	-		Sama_2496	0.11	+0.9
2,997,006	-		Sama_2496	0.14	-0.4
2,997,050	+		Sama_2496	0.21	+4.1
2,997,065	-		Sama_2496	0.23	-0.8
2,997,134	-		Sama_2496	0.32	-2.6
2,997,142	+		Sama_2496	0.33	+2.2
2,997,142	+		Sama_2496	0.33	+1.2
2,997,144	-		Sama_2496	0.34	-0.5
2,997,168	+		Sama_2496	0.37	-2.6
2,997,175	-		Sama_2496	0.38	+0.6
2,997,175	-		Sama_2496	0.38	-0.7
2,997,203	-		Sama_2496	0.42	+3.2
2,997,310	+		Sama_2496	0.57	-2.2
2,997,310	+		Sama_2496	0.57	-1.9
2,997,310	+		Sama_2496	0.57	+0.6
2,997,310	+		Sama_2496	0.57	-0.9
2,997,310	+		Sama_2496	0.57	+0.6
2,997,311	-		Sama_2496	0.57	-2.1
2,997,311	-		Sama_2496	0.57	-2.2
2,997,395	-		Sama_2496	0.69	-1.1
2,997,395	-		Sama_2496	0.69	+1.3
2,997,397	+		Sama_2496	0.69	-2.4
2,997,397	+		Sama_2496	0.69	-0.6
2,997,398	-		Sama_2496	0.69	-2.3
2,997,398	-		Sama_2496	0.69	-2.2
2,997,398	-		Sama_2496	0.69	+0.1
2,997,398	-		Sama_2496	0.69	+3.2
2,997,475	+		Sama_2496	0.80	-0.7
2,997,475	+		Sama_2496	0.80	-0.4
2,997,476	-		Sama_2496	0.80	-0.9
2,997,476	-		Sama_2496	0.80	+0.5
2,997,509	-		Sama_2496	0.85	+0.5
2,997,509	-		Sama_2496	0.85	-1.4
2,997,512	-		Sama_2496	0.85	+1.9
2,997,642	+				-0.4
2,997,642	+				+0.9
2,997,642	+				-2.3
2,997,642	+				-1.8
2,997,642	+				-1.8
2,997,642	+				-2.4
2,997,642	+				+1.8
2,997,642	+				-1.4
2,997,643	-				+0.1
2,997,643	-				+1.9
2,997,643	-				-2.2
2,997,643	-				-0.4
2,997,643	-				-1.4
2,997,643	-				-2.1
2,997,643	-				+1.3
2,997,643	-				+0.1
2,997,644	+				+2.8
2,997,644	+				-1.4
2,997,644	+				-1.7
2,997,644	+				+2.7
2,997,644	+				-0.7
2,997,644	+				-0.5
2,997,645	-				-0.5
2,997,645	-				-0.7
2,997,645	-				-1.2
2,997,757	+				-1.2
2,997,758	-				-2.1
2,997,758	-				-0.7
2,997,759	+				-0.5
2,997,770	+				-1.5
2,997,771	-				-0.3
2,997,780	+				-2.1
2,997,839	+		Sama_2497	0.13	+1.2
2,997,840	-		Sama_2497	0.13	-0.4
2,997,840	-		Sama_2497	0.13	-2.8
2,997,840	-		Sama_2497	0.13	-1.4
2,997,840	-		Sama_2497	0.13	-2.4
2,997,858	+		Sama_2497	0.14	-1.2
2,997,858	+		Sama_2497	0.14	+0.6
2,997,859	-		Sama_2497	0.14	+0.1
2,997,860	+		Sama_2497	0.14	-0.1
2,997,860	+		Sama_2497	0.14	-0.2
2,997,861	-		Sama_2497	0.14	-0.9
2,997,861	-		Sama_2497	0.14	-1.4
2,997,861	-		Sama_2497	0.14	+0.3
2,997,861	-		Sama_2497	0.14	-1.9
2,997,861	-		Sama_2497	0.14	-0.4
2,997,861	-		Sama_2497	0.14	-0.8
2,997,879	-		Sama_2497	0.15	+1.4
2,997,955	-		Sama_2497	0.20	+2.2
2,997,965	+		Sama_2497	0.20	+1.4
2,997,965	+		Sama_2497	0.20	-1.2
2,997,965	+		Sama_2497	0.20	+1.1
2,997,965	+		Sama_2497	0.20	+4.5
2,997,965	+		Sama_2497	0.20	-0.4
2,997,966	-		Sama_2497	0.20	+1.5
2,997,966	-		Sama_2497	0.20	-1.7
2,997,966	-		Sama_2497	0.20	+1.9
2,997,966	-		Sama_2497	0.20	-1.7
2,997,966	-		Sama_2497	0.20	-1.9
2,997,974	-		Sama_2497	0.21	+0.1
2,997,977	+		Sama_2497	0.21	+2.2
2,997,977	+		Sama_2497	0.21	-1.9
2,997,988	+		Sama_2497	0.22	+0.3
2,997,989	-		Sama_2497	0.22	-0.2
2,997,989	-		Sama_2497	0.22	-2.3
2,998,039	-		Sama_2497	0.25	+1.3
2,998,175	+		Sama_2497	0.33	+0.8
2,998,176	-		Sama_2497	0.33	-1.2
2,998,176	-		Sama_2497	0.33	-2.1
2,998,186	-		Sama_2497	0.33	-1.2
2,998,186	-		Sama_2497	0.33	+0.5
2,998,211	+		Sama_2497	0.35	-0.7
2,998,212	-		Sama_2497	0.35	+0.2
2,998,212	-		Sama_2497	0.35	-0.4
2,998,301	+		Sama_2497	0.40	+1.6
2,998,301	+		Sama_2497	0.40	+0.1
2,998,301	+		Sama_2497	0.40	+0.9
2,998,302	-		Sama_2497	0.40	-2.2
2,998,322	-		Sama_2497	0.41	+0.6
2,998,322	-		Sama_2497	0.41	-1.5
2,998,379	+		Sama_2497	0.44	-2.5
2,998,379	+		Sama_2497	0.44	-1.5
2,998,379	+		Sama_2497	0.44	-1.2
2,998,381	+		Sama_2497	0.45	+2.1
2,998,381	+		Sama_2497	0.45	-0.3
2,998,381	+		Sama_2497	0.45	+1.6
2,998,381	+		Sama_2497	0.45	-0.9
2,998,382	-		Sama_2497	0.45	+0.1
2,998,382	-		Sama_2497	0.45	-2.7
2,998,382	-		Sama_2497	0.45	+4.3
2,998,549	-		Sama_2497	0.54	-0.4
2,998,549	-		Sama_2497	0.54	+0.6
2,998,574	+		Sama_2497	0.56	+2.2
2,998,575	-		Sama_2497	0.56	-0.9
2,998,666	+		Sama_2497	0.61	+1.9
2,998,677	+		Sama_2497	0.62	-2.1
2,998,734	+		Sama_2497	0.65	+0.5
2,998,735	-		Sama_2497	0.65	-1.4
2,998,735	-		Sama_2497	0.65	-0.9
2,998,735	-		Sama_2497	0.65	-0.7
2,998,823	+		Sama_2497	0.70	-2.3
2,998,842	+		Sama_2497	0.72	+4.1
2,998,842	+		Sama_2497	0.72	+2.2
2,998,843	-		Sama_2497	0.72	+1.8
2,998,843	-		Sama_2497	0.72	-0.4
2,998,843	-		Sama_2497	0.72	+3.0
2,998,866	+		Sama_2497	0.73	+3.0
2,998,866	+		Sama_2497	0.73	-0.4
2,998,866	+		Sama_2497	0.73	-0.4
2,998,866	+		Sama_2497	0.73	-0.9
2,998,866	+		Sama_2497	0.73	+0.2
2,998,867	-		Sama_2497	0.73	+2.7
2,998,867	-		Sama_2497	0.73	-0.7
2,998,867	-		Sama_2497	0.73	+1.5
2,998,867	-		Sama_2497	0.73	+0.9
2,998,867	-		Sama_2497	0.73	+5.4
2,998,867	-		Sama_2497	0.73	-0.5
2,998,870	+		Sama_2497	0.73	-0.2
2,998,870	+		Sama_2497	0.73	-0.4
2,998,870	+		Sama_2497	0.73	-1.8
2,998,870	+		Sama_2497	0.73	-1.4
2,998,870	+		Sama_2497	0.73	+1.1
2,998,870	+		Sama_2497	0.73	+2.6
2,998,870	+		Sama_2497	0.73	-1.4
2,998,870	+		Sama_2497	0.73	+1.5
2,998,870	+		Sama_2497	0.73	-0.4
2,998,871	-		Sama_2497	0.73	+0.1
2,998,871	-		Sama_2497	0.73	-1.0
2,998,871	-		Sama_2497	0.73	+1.6
2,998,871	-		Sama_2497	0.73	+0.6
2,998,871	-		Sama_2497	0.73	+1.1
2,998,871	-		Sama_2497	0.73	+0.1
2,998,871	-		Sama_2497	0.73	+0.5
2,998,889	-		Sama_2497	0.74	+3.4
2,998,964	+		Sama_2497	0.79	-0.0
2,998,983	-		Sama_2497	0.80	-2.1
2,999,005	+		Sama_2497	0.81	-1.4
2,999,006	-		Sama_2497	0.81	-0.1
2,999,011	+		Sama_2497	0.81	-2.5
2,999,012	-		Sama_2497	0.81	-0.9
2,999,012	-		Sama_2497	0.81	-0.3
2,999,012	-		Sama_2497	0.81	-2.1
2,999,067	+		Sama_2497	0.85	+0.9
2,999,068	-		Sama_2497	0.85	+0.2
2,999,068	-		Sama_2497	0.85	-1.2
2,999,193	+				-0.4
2,999,198	+				-0.9
2,999,198	+				-0.4
2,999,198	+				-1.1
2,999,198	+				-2.4
2,999,198	+				-0.9
2,999,198	+				-0.7
2,999,198	+				-0.7
2,999,198	+				+0.6
2,999,199	-				-1.7
2,999,199	-				+3.9
2,999,199	-				-0.9
2,999,199	-				-2.1
2,999,199	-				-0.2
2,999,199	-				-0.4
2,999,263	+				+0.4
2,999,264	-				-1.9
2,999,274	+				-0.8
2,999,274	+				-0.5
2,999,274	+				-0.5
2,999,275	-				+2.2
2,999,275	-				-1.5
2,999,355	+				+0.1
2,999,355	+				-1.5
2,999,356	-				-2.5
2,999,356	-				-0.2
2,999,404	+				-1.2
2,999,404	+				-1.4
2,999,434	+				-0.2
2,999,434	+				-1.2
2,999,434	+				+0.8
2,999,434	+				+0.3
2,999,434	+				-2.4
2,999,434	+				-1.2
2,999,434	+				+0.1
2,999,435	-				+0.0
2,999,435	-				-1.3
2,999,435	-				+0.1
2,999,435	-				-0.7
2,999,440	-				+1.6
2,999,440	-				-1.8
2,999,472	+				-1.7
2,999,472	+				+1.6
2,999,473	-				-1.5
2,999,475	+				-0.3
2,999,486	+				+3.4
2,999,498	+				+1.1
2,999,499	-				-0.4
2,999,500	+				-1.1
2,999,500	+				+3.5
2,999,501	-				-0.7
2,999,577	+				-0.9
2,999,577	+				+2.4
2,999,578	-				-0.4
2,999,578	-				-0.9
2,999,578	-				+0.2
2,999,579	+				-1.6
2,999,579	+				+0.1
2,999,580	-				+0.6
2,999,612	+				+2.4
2,999,635	+				+1.6
2,999,635	+				+1.1
2,999,694	+				+0.1
2,999,715	+				+1.6
2,999,715	+				+0.1
2,999,716	-				+3.7
2,999,716	-				+0.6
2,999,716	-				-0.9
2,999,716	-				-1.0
2,999,730	+		Sama_2498	0.11	-2.4
2,999,750	+		Sama_2498	0.13	+1.2
2,999,751	-		Sama_2498	0.13	+1.2
2,999,754	+		Sama_2498	0.13	-0.2
2,999,754	+		Sama_2498	0.13	-0.4
2,999,755	-		Sama_2498	0.13	-0.9
2,999,829	-		Sama_2498	0.22	+2.2
2,999,829	-		Sama_2498	0.22	+1.1
2,999,935	-		Sama_2498	0.33	-0.9
2,999,972	-		Sama_2498	0.37	+0.2
2,999,972	-		Sama_2498	0.37	-1.2
2,999,972	-		Sama_2498	0.37	-0.7
3,000,001	-		Sama_2498	0.41	-0.2
3,000,005	+		Sama_2498	0.41	-2.2
3,000,005	+		Sama_2498	0.41	+5.8
3,000,006	-		Sama_2498	0.41	+0.1
3,000,006	-		Sama_2498	0.41	-2.2
3,000,036	+		Sama_2498	0.44	-3.3
3,000,036	+		Sama_2498	0.44	-1.2
3,000,037	-		Sama_2498	0.44	-1.5
3,000,119	-		Sama_2498	0.54	+1.4
3,000,128	+		Sama_2498	0.55	+0.8
3,000,128	+		Sama_2498	0.55	+2.9
3,000,128	+		Sama_2498	0.55	+2.1
3,000,129	-		Sama_2498	0.55	-2.2
3,000,129	-		Sama_2498	0.55	-1.2
3,000,129	-		Sama_2498	0.55	-2.3
3,000,183	+		Sama_2498	0.61	-0.5
3,000,183	+		Sama_2498	0.61	-1.3
3,000,183	+		Sama_2498	0.61	-2.3
3,000,184	-		Sama_2498	0.61	+4.0
3,000,184	-		Sama_2498	0.61	+0.6
3,000,318	-		Sama_2498	0.75	+0.4