Strain Fitness in Shewanella amazonensis SB2B around Sama_2342

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
2,807,413	+		Sama_2340	0.82	-2.2
2,807,468	-		Sama_2340	0.88	+0.2
2,807,468	-		Sama_2340	0.88	-0.4
2,807,524	+				-0.4
2,807,525	-				+0.4
2,807,549	+				-1.3
2,807,594	+				+2.7
2,807,601	-				+0.5
2,807,716	-		Sama_2341	0.13	-0.4
2,807,716	-		Sama_2341	0.13	-1.2
2,807,750	-		Sama_2341	0.19	-0.9
2,807,763	+		Sama_2341	0.21	-1.2
2,807,764	-		Sama_2341	0.21	+2.4
2,807,831	-		Sama_2341	0.32	+1.3
2,807,876	-		Sama_2341	0.39	-1.1
2,807,982	+		Sama_2341	0.56	-1.1
2,807,982	+		Sama_2341	0.56	-1.7
2,807,982	+		Sama_2341	0.56	+1.6
2,807,983	-		Sama_2341	0.56	-1.2
2,807,983	-		Sama_2341	0.56	-1.0
2,808,030	+		Sama_2341	0.64	-1.5
2,808,031	-		Sama_2341	0.64	+2.1
2,808,031	-		Sama_2341	0.64	-0.4
2,808,031	-		Sama_2341	0.64	+0.3
2,808,066	+		Sama_2341	0.70	-1.6
2,808,066	+		Sama_2341	0.70	-1.5
2,808,084	-		Sama_2341	0.72	-1.2
2,808,087	-		Sama_2341	0.73	-1.7
2,808,100	+		Sama_2341	0.75	-2.5
2,808,101	-		Sama_2341	0.75	-0.3
2,808,101	-		Sama_2341	0.75	-0.5
2,808,101	-		Sama_2341	0.75	+0.0
2,808,101	-		Sama_2341	0.75	+1.6
2,808,146	+		Sama_2341	0.82	+0.0
2,808,147	-		Sama_2341	0.83	-1.2
2,808,152	+		Sama_2341	0.83	-1.0
2,808,153	-		Sama_2341	0.84	+0.0
2,808,258	+				-0.4
2,808,293	-				-2.3
2,808,342	+				-1.4
2,808,421	+				-1.5
2,808,436	+				-1.8
2,808,469	+				+1.4
2,808,469	+				-0.4
2,808,469	+				+2.5
2,808,469	+				+4.4
2,808,469	+				+0.5
2,808,469	+				+1.3
2,808,470	-				-2.1
2,808,470	-				-1.7
2,808,470	-				-2.8
2,808,470	-				-0.3
2,808,470	-				-1.3
2,808,470	-				+3.5
2,808,529	+		Sama_2342	0.11	+0.5
2,808,529	+		Sama_2342	0.11	+2.2
2,808,712	+		Sama_2342	0.27	+0.9
2,808,712	+		Sama_2342	0.27	+1.6
2,808,717	-		Sama_2342	0.28	+0.1
2,808,785	+		Sama_2342	0.34	-1.2
2,808,785	+		Sama_2342	0.34	-0.7
2,808,822	+		Sama_2342	0.37	-0.4
2,808,822	+		Sama_2342	0.37	-2.3
2,808,822	+		Sama_2342	0.37	-1.4
2,808,823	-		Sama_2342	0.37	-1.7
2,808,823	-		Sama_2342	0.37	-1.7
2,808,823	-		Sama_2342	0.37	+1.8
2,808,823	-		Sama_2342	0.37	+1.6
2,808,823	-		Sama_2342	0.37	+0.1
2,808,823	-		Sama_2342	0.37	-0.9
2,808,871	+		Sama_2342	0.42	+1.4
2,808,872	-		Sama_2342	0.42	-1.2
2,808,872	-		Sama_2342	0.42	-2.1
2,808,872	-		Sama_2342	0.42	-0.2
2,808,894	-		Sama_2342	0.44	+2.2
2,809,021	+		Sama_2342	0.55	+0.6
2,809,021	+		Sama_2342	0.55	+0.6
2,809,022	-		Sama_2342	0.55	-2.7
2,809,022	-		Sama_2342	0.55	-1.4
2,809,022	-		Sama_2342	0.55	-1.3
2,809,022	-		Sama_2342	0.55	-1.2
2,809,108	+		Sama_2342	0.63	+0.2
2,809,108	+		Sama_2342	0.63	-0.9
2,809,108	+		Sama_2342	0.63	-2.1
2,809,108	+		Sama_2342	0.63	+1.1
2,809,109	-		Sama_2342	0.63	-0.7
2,809,109	-		Sama_2342	0.63	-1.4
2,809,109	-		Sama_2342	0.63	-2.2
2,809,109	-		Sama_2342	0.63	+0.3
2,809,109	-		Sama_2342	0.63	+2.2
2,809,109	-		Sama_2342	0.63	-1.9
2,809,109	-		Sama_2342	0.63	+3.1
2,809,109	-		Sama_2342	0.63	+0.4
2,809,109	-		Sama_2342	0.63	-1.2
2,809,172	+		Sama_2342	0.69	-0.7
2,809,172	+		Sama_2342	0.69	+0.9
2,809,173	-		Sama_2342	0.69	-0.4
2,809,173	-		Sama_2342	0.69	+0.2
2,809,240	-		Sama_2342	0.75	-0.2
2,809,261	+		Sama_2342	0.77	-1.4
2,809,262	-		Sama_2342	0.77	-1.4
2,809,262	-		Sama_2342	0.77	+2.6
2,809,266	-		Sama_2342	0.77	-1.1
2,809,329	+		Sama_2342	0.83	+0.4
2,809,329	+		Sama_2342	0.83	-1.1
2,809,329	+		Sama_2342	0.83	-1.4
2,809,329	+		Sama_2342	0.83	-1.6
2,809,330	-		Sama_2342	0.83	+0.1
2,809,394	+		Sama_2342	0.89	-1.5
2,809,414	-				-1.4
2,809,414	-				-0.7
2,809,414	-				-0.9
2,809,466	+				-1.0
2,809,467	-				+0.8
2,809,467	-				-0.4
2,809,467	-				+0.6
2,809,529	+				+2.5
2,809,529	+				-0.8
2,809,635	-				-1.2
2,809,635	-				+0.2
2,809,635	-				-2.2
2,809,647	+				-0.1
2,809,747	+				-0.7
2,809,755	-				+0.6
2,809,781	-				-0.2
2,809,811	+				+0.6
2,809,812	-				-0.8
2,809,852	+		Sama_2343	0.11	-1.3
2,809,852	+		Sama_2343	0.11	-0.9
2,809,852	+		Sama_2343	0.11	+2.0
2,809,853	-		Sama_2343	0.11	-0.2
2,809,940	-		Sama_2343	0.14	-1.4
2,810,052	+		Sama_2343	0.17	+2.6
2,810,052	+		Sama_2343	0.17	+1.3
2,810,052	+		Sama_2343	0.17	-1.7
2,810,052	+		Sama_2343	0.17	+1.4
2,810,074	+		Sama_2343	0.18	-1.6
2,810,075	-		Sama_2343	0.18	+1.9
2,810,159	+		Sama_2343	0.21	-0.5
2,810,159	+		Sama_2343	0.21	+1.9
2,810,159	+		Sama_2343	0.21	+1.6
2,810,159	+		Sama_2343	0.21	+0.1
2,810,263	+		Sama_2343	0.24	-1.9
2,810,263	+		Sama_2343	0.24	+0.6
2,810,263	+		Sama_2343	0.24	+0.6
2,810,263	+		Sama_2343	0.24	+0.6
2,810,264	-		Sama_2343	0.24	-1.4
2,810,264	-		Sama_2343	0.24	-0.7
2,810,264	-		Sama_2343	0.24	+0.3
2,810,264	-		Sama_2343	0.24	+0.3
2,810,281	+		Sama_2343	0.25	-3.3
2,810,281	+		Sama_2343	0.25	-0.9
2,810,284	+		Sama_2343	0.25	+1.4
2,810,284	+		Sama_2343	0.25	-1.4
2,810,284	+		Sama_2343	0.25	-0.5
2,810,284	+		Sama_2343	0.25	+0.1
2,810,284	+		Sama_2343	0.25	-0.4
2,810,285	-		Sama_2343	0.25	+0.9
2,810,285	-		Sama_2343	0.25	+1.6
2,810,319	+		Sama_2343	0.26	-2.4
2,810,319	+		Sama_2343	0.26	-0.8
2,810,321	+		Sama_2343	0.26	-0.5
2,810,321	+		Sama_2343	0.26	-0.4
2,810,321	+		Sama_2343	0.26	-0.5
2,810,321	+		Sama_2343	0.26	+0.3
2,810,321	+		Sama_2343	0.26	-0.8
2,810,321	+		Sama_2343	0.26	-0.9
2,810,321	+		Sama_2343	0.26	+0.2
2,810,321	+		Sama_2343	0.26	-1.2
2,810,322	-		Sama_2343	0.26	+2.0
2,810,322	-		Sama_2343	0.26	-0.2
2,810,322	-		Sama_2343	0.26	+1.6
2,810,322	-		Sama_2343	0.26	-1.2
2,810,322	-		Sama_2343	0.26	-1.2
2,810,384	+		Sama_2343	0.28	-0.7
2,810,385	-		Sama_2343	0.28	+5.6
2,810,385	-		Sama_2343	0.28	+0.6
2,810,394	-		Sama_2343	0.28	-1.8
2,810,405	-		Sama_2343	0.29	+0.1
2,810,502	+		Sama_2343	0.32	-1.4
2,810,502	+		Sama_2343	0.32	-1.4
2,810,502	+		Sama_2343	0.32	-0.8
2,810,503	-		Sama_2343	0.32	+1.6
2,810,503	-		Sama_2343	0.32	-1.2
2,810,503	-		Sama_2343	0.32	-0.2