Strain Fitness in Shewanella amazonensis SB2B around Sama_2238

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
2,701,279	-		Sama_2236	0.88	+0.7
2,701,304	-		Sama_2236	0.90	+0.3
2,701,350	+				-0.7
2,701,350	+				-1.3
2,701,350	+				-0.9
2,701,351	-				+1.2
2,701,351	-				-0.3
2,701,351	-				-1.5
2,701,357	-				-1.3
2,701,357	-				+3.2
2,701,359	-				+3.8
2,701,359	-				+2.9
2,701,359	-				-1.7
2,701,359	-				-1.3
2,701,359	-				-0.9
2,701,414	+				+0.2
2,701,414	+				-0.3
2,701,414	+				+3.0
2,701,414	+				+0.5
2,701,414	+				-2.3
2,701,414	+				-0.7
2,701,415	-				+1.3
2,701,415	-				-0.5
2,701,415	-				+4.7
2,701,415	-				-0.9
2,701,465	+				-0.7
2,701,465	+				-0.6
2,701,466	-				+2.4
2,701,471	+				-0.8
2,701,471	+				-1.5
2,701,501	-				-3.0
2,701,501	-				+3.0
2,701,501	-				+3.5
2,701,550	+				-1.4
2,701,551	-				-1.1
2,701,551	-				-0.4
2,701,560	+				-1.3
2,701,560	+				-1.2
2,701,560	+				-1.5
2,701,561	-				+3.7
2,702,080	-				+0.8
2,702,080	-				-1.2
2,702,080	-				+2.9
2,702,080	-				-1.8
2,702,098	-		Sama_2238	0.13	+0.5
2,702,105	+		Sama_2238	0.16	-0.9
2,702,129	+		Sama_2238	0.26	-0.8
2,702,181	+		Sama_2238	0.48	+2.4
2,702,181	+		Sama_2238	0.48	-1.6
2,702,181	+		Sama_2238	0.48	-1.5
2,702,190	+		Sama_2238	0.52	+2.2
2,702,190	+		Sama_2238	0.52	+3.4
2,702,190	+		Sama_2238	0.52	+1.7
2,702,190	+		Sama_2238	0.52	+0.7
2,702,191	-		Sama_2238	0.52	-0.9
2,702,191	-		Sama_2238	0.52	-0.5
2,702,194	+		Sama_2238	0.54	+5.1
2,702,194	+		Sama_2238	0.54	+1.5
2,702,194	+		Sama_2238	0.54	-2.2
2,702,194	+		Sama_2238	0.54	-1.5
2,702,195	-		Sama_2238	0.54	-0.9
2,702,205	+		Sama_2238	0.58	+0.7
2,702,211	-		Sama_2238	0.61	+4.3
2,702,211	-		Sama_2238	0.61	-0.7
2,702,211	-		Sama_2238	0.61	+1.0
2,702,285	+				-1.2
2,702,290	+				-1.5
2,702,291	-				-1.1
2,702,291	-				-0.7
2,702,291	-				-0.7
2,702,294	+				+3.4
2,702,294	+				+2.2
2,702,294	+				-1.7
2,702,294	+				-0.7
2,702,294	+				-0.7
2,702,294	+				-2.2
2,702,295	-				-0.0
2,702,295	-				-0.4
2,702,295	-				+3.7
2,702,295	-				+0.5
2,702,295	-				-1.2
2,702,346	+				-1.6
2,702,371	-				+1.5
2,702,371	-				+2.2
2,702,371	-				-2.1
2,702,386	+				-1.4
2,702,386	+				-0.0
2,702,386	+				+1.4
2,702,387	-				-0.7
2,702,387	-				-0.4
2,702,387	-				-0.9
2,702,387	-				-0.1
2,702,387	-				+1.6
2,702,429	+				-1.5
2,702,430	-				-0.9
2,703,295	-				+0.4
2,703,295	-				-0.9