Strain Fitness in Shewanella amazonensis SB2B around Sama_2179

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
2,635,471	+		Sama_2178	0.35	+1.7
2,635,501	+		Sama_2178	0.37	+0.4
2,635,501	+		Sama_2178	0.37	+0.0
2,635,513	+		Sama_2178	0.38	-0.7
2,635,551	+		Sama_2178	0.41	+0.6
2,635,551	+		Sama_2178	0.41	+3.1
2,635,592	+		Sama_2178	0.44	+2.9
2,635,592	+		Sama_2178	0.44	+0.4
2,635,615	+		Sama_2178	0.46	-1.0
2,635,659	+		Sama_2178	0.49	-1.5
2,635,718	+		Sama_2178	0.54	-0.7
2,635,726	+		Sama_2178	0.54	-1.6
2,635,754	+		Sama_2178	0.56	+1.8
2,635,754	+		Sama_2178	0.56	+0.6
2,635,820	+		Sama_2178	0.61	+1.8
2,635,820	+		Sama_2178	0.61	+1.9
2,635,912	+		Sama_2178	0.68	+0.0
2,636,009	+		Sama_2178	0.76	-0.9
2,636,009	+		Sama_2178	0.76	-0.2
2,636,047	+		Sama_2178	0.78	+0.0
2,636,048	-		Sama_2178	0.78	-1.7
2,636,051	+		Sama_2178	0.79	+2.3
2,636,051	+		Sama_2178	0.79	-1.4
2,636,051	+		Sama_2178	0.79	+1.6
2,636,051	+		Sama_2178	0.79	-1.9
2,636,051	+		Sama_2178	0.79	-0.4
2,636,052	-		Sama_2178	0.79	+1.6
2,636,087	+		Sama_2178	0.81	-2.7
2,636,087	+		Sama_2178	0.81	-1.4
2,636,087	+		Sama_2178	0.81	-0.1
2,636,106	+		Sama_2178	0.83	+1.6
2,636,106	+		Sama_2178	0.83	-1.4
2,636,106	+		Sama_2178	0.83	-0.4
2,636,107	-		Sama_2178	0.83	-1.6
2,636,174	+		Sama_2178	0.88	+0.6
2,636,174	+		Sama_2178	0.88	+0.0
2,636,174	+		Sama_2178	0.88	-2.9
2,636,174	+		Sama_2178	0.88	-0.9
2,636,174	+		Sama_2178	0.88	-1.0
2,636,174	+		Sama_2178	0.88	-0.7
2,636,175	-		Sama_2178	0.88	-1.0
2,636,175	-		Sama_2178	0.88	+0.0
2,636,175	-		Sama_2178	0.88	+6.1
2,636,300	+				-1.6
2,636,300	+				+0.0
2,636,300	+				+0.4
2,636,300	+				-2.1
2,636,300	+				-1.0
2,636,301	-				+1.3
2,636,303	+				+1.7
2,636,315	+				-0.3
2,636,315	+				+0.9
2,636,315	+				+3.2
2,636,316	-				-0.7
2,636,321	+				+2.9
2,636,321	+				-1.7
2,636,321	+				-2.7
2,636,321	+				-0.7
2,636,321	+				+0.0
2,636,322	-				+1.6
2,636,327	+				-0.8
2,636,328	-				+2.7
2,636,526	+		Sama_2179	0.18	-1.4
2,636,527	-		Sama_2179	0.19	+0.6
2,636,544	-		Sama_2179	0.23	-2.1
2,636,594	+		Sama_2179	0.36	-1.6
2,636,605	-		Sama_2179	0.39	-2.3
2,636,605	-		Sama_2179	0.39	+2.2
2,636,605	-		Sama_2179	0.39	+0.6
2,636,641	-		Sama_2179	0.49	+4.0
2,636,666	+		Sama_2179	0.55	+1.7
2,636,667	-		Sama_2179	0.56	+4.8
2,636,672	+		Sama_2179	0.57	-0.6
2,636,672	+		Sama_2179	0.57	+0.6
2,636,673	-		Sama_2179	0.57	-1.9
2,636,693	-		Sama_2179	0.62	+0.3
2,636,798	+				+0.9
2,636,798	+				+1.2
2,636,874	+				-1.7
2,636,875	-				-1.2
2,636,875	-				-1.4
2,636,875	-				-1.7
2,637,012	+		Sama_2180	0.14	+3.6
2,637,013	-		Sama_2180	0.14	-2.7
2,637,075	+		Sama_2180	0.23	-0.1
2,637,076	-		Sama_2180	0.23	+1.3
2,637,076	-		Sama_2180	0.23	+1.0
2,637,076	-		Sama_2180	0.23	+3.2
2,637,091	-		Sama_2180	0.25	-1.7
2,637,128	+		Sama_2180	0.30	-1.0
2,637,129	-		Sama_2180	0.30	+0.4
2,637,245	+		Sama_2180	0.46	-1.2
2,637,267	-		Sama_2180	0.50	+2.4
2,637,299	+		Sama_2180	0.54	-0.7
2,637,299	+		Sama_2180	0.54	-1.7
2,637,299	+		Sama_2180	0.54	+0.6
2,637,299	+		Sama_2180	0.54	+0.1
2,637,300	-		Sama_2180	0.54	-1.6
2,637,317	-		Sama_2180	0.56	-1.0
2,637,324	+		Sama_2180	0.57	-0.3
2,637,325	-		Sama_2180	0.58	-2.1
2,637,408	+		Sama_2180	0.69	+2.0
2,637,545	-		Sama_2180	0.88	-2.0
2,637,545	-		Sama_2180	0.88	-2.1
2,637,545	-		Sama_2180	0.88	+3.0
2,637,565	+				+0.5
2,637,565	+				-2.0
2,637,566	-				+2.4
2,637,566	-				+1.2
2,637,566	-				+0.8
2,637,577	+				-0.7
2,637,578	-				+0.0
2,637,578	-				+0.1
2,637,580	+				+0.4
2,637,608	-				+1.8
2,637,608	-				-1.6
2,637,611	+				+2.4
2,637,612	-				+1.1
2,637,614	+				+1.3
2,637,615	-				+1.6
2,637,650	-				+0.7
2,637,662	+				-1.2
2,637,663	-				-2.4
2,637,764	-				+1.2