Strain Fitness in Shewanella amazonensis SB2B around Sama_2150

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
2,596,610	-				+1.3
2,596,634	-				+4.1
2,596,634	-				+1.0
2,596,671	+				-1.6
2,596,672	-				+0.1
2,596,672	-				-0.0
2,596,675	+				+2.5
2,596,903	+	truA	Sama_2150	0.24	-0.8
2,596,903	+	truA	Sama_2150	0.24	-1.5
2,596,904	-	truA	Sama_2150	0.24	-0.6
2,596,920	+	truA	Sama_2150	0.26	-0.8
2,596,920	+	truA	Sama_2150	0.26	-2.0
2,596,920	+	truA	Sama_2150	0.26	-2.2
2,596,920	+	truA	Sama_2150	0.26	+1.6
2,596,921	-	truA	Sama_2150	0.26	-1.0
2,596,921	-	truA	Sama_2150	0.26	-0.4
2,596,960	-	truA	Sama_2150	0.31	-0.8
2,596,960	-	truA	Sama_2150	0.31	-2.4
2,596,960	-	truA	Sama_2150	0.31	-0.0
2,596,960	-	truA	Sama_2150	0.31	-1.2
2,596,961	+	truA	Sama_2150	0.31	+0.6
2,596,961	+	truA	Sama_2150	0.31	-0.4
2,596,961	+	truA	Sama_2150	0.31	+1.6
2,596,961	+	truA	Sama_2150	0.31	-1.4
2,596,961	+	truA	Sama_2150	0.31	-2.6
2,596,961	+	truA	Sama_2150	0.31	-1.0
2,596,961	+	truA	Sama_2150	0.31	+0.8
2,596,961	+	truA	Sama_2150	0.31	+0.2
2,596,961	+	truA	Sama_2150	0.31	+0.6
2,596,961	+	truA	Sama_2150	0.31	-0.0
2,596,961	+	truA	Sama_2150	0.31	+1.6
2,596,962	-	truA	Sama_2150	0.32	+2.6
2,596,962	-	truA	Sama_2150	0.32	-1.6
2,596,962	-	truA	Sama_2150	0.32	-1.0
2,596,962	-	truA	Sama_2150	0.32	-2.2
2,596,962	-	truA	Sama_2150	0.32	-1.2
2,596,962	-	truA	Sama_2150	0.32	-0.8
2,596,962	-	truA	Sama_2150	0.32	-1.1
2,596,962	-	truA	Sama_2150	0.32	-1.9
2,596,962	-	truA	Sama_2150	0.32	-1.2
2,596,989	+	truA	Sama_2150	0.35	-0.4
2,596,990	-	truA	Sama_2150	0.35	-1.7
2,596,990	-	truA	Sama_2150	0.35	-2.0
2,596,990	-	truA	Sama_2150	0.35	+0.5
2,596,990	-	truA	Sama_2150	0.35	-0.6
2,596,990	-	truA	Sama_2150	0.35	+1.6
2,596,990	-	truA	Sama_2150	0.35	+1.0
2,596,990	-	truA	Sama_2150	0.35	-0.8
2,596,990	-	truA	Sama_2150	0.35	-1.2
2,596,993	+	truA	Sama_2150	0.35	+0.6
2,596,994	-	truA	Sama_2150	0.36	+0.2
2,596,994	-	truA	Sama_2150	0.36	-0.8
2,596,994	-	truA	Sama_2150	0.36	-0.0
2,597,010	+	truA	Sama_2150	0.38	-1.4
2,597,060	-	truA	Sama_2150	0.44	-2.7
2,597,060	-	truA	Sama_2150	0.44	-0.9
2,597,060	-	truA	Sama_2150	0.44	-0.0
2,597,111	+	truA	Sama_2150	0.51	-0.4
2,597,163	+	truA	Sama_2150	0.57	-1.9
2,597,164	-	truA	Sama_2150	0.57	+2.6
2,597,307	+	truA	Sama_2150	0.75	+0.2
2,597,339	-	truA	Sama_2150	0.80	+0.2
2,597,503	+				+3.7
2,597,504	-				-1.0
2,597,541	+				-1.2
2,597,542	-				-0.4
2,597,544	+				-1.9
2,597,545	-				+0.6
2,597,545	-				-0.0
2,597,599	-				-1.4
2,597,620	-				+0.9
2,597,620	-				-1.8
2,597,620	-				-0.2
2,597,620	-				+0.2
2,597,624	+				-1.1
2,597,624	+				+0.2
2,597,625	-				-1.0
2,597,730	+				-0.1
2,597,730	+				-1.8
2,597,731	-				-1.9
2,597,731	-				+3.4
2,597,825	+				+0.6
2,597,825	+				-1.1
2,597,825	+				-0.0
2,597,826	-				-1.9
2,597,826	-				+2.0
2,597,828	-				+3.4
2,597,828	-				-1.3
2,597,834	-				-0.3
2,597,899	+				-0.0
2,597,900	-		Sama_2151	0.10	+2.8
2,597,924	-		Sama_2151	0.11	-0.0
2,597,939	+		Sama_2151	0.11	+1.1
2,597,940	-		Sama_2151	0.11	-0.8
2,597,940	-		Sama_2151	0.11	-2.2
2,598,140	-		Sama_2151	0.19	+0.2
2,598,157	+		Sama_2151	0.19	-1.4
2,598,157	+		Sama_2151	0.19	-0.7
2,598,158	-		Sama_2151	0.19	-2.1
2,598,158	-		Sama_2151	0.19	-0.9
2,598,158	-		Sama_2151	0.19	-1.8
2,598,158	-		Sama_2151	0.19	+2.8
2,598,187	+		Sama_2151	0.20	+1.7
2,598,187	+		Sama_2151	0.20	-0.4
2,598,188	-		Sama_2151	0.20	+2.1
2,598,188	-		Sama_2151	0.20	+6.2
2,598,296	-		Sama_2151	0.24	-0.4
2,598,296	-		Sama_2151	0.24	-0.2
2,598,383	-		Sama_2151	0.27	+3.0
2,598,458	-		Sama_2151	0.30	-2.1
2,598,458	-		Sama_2151	0.30	+4.9
2,598,458	-		Sama_2151	0.30	+4.1
2,598,458	-		Sama_2151	0.30	-1.2
2,598,458	-		Sama_2151	0.30	-1.2
2,598,458	-		Sama_2151	0.30	-0.8
2,598,460	+		Sama_2151	0.30	-1.4
2,598,461	-		Sama_2151	0.30	-2.3
2,598,461	-		Sama_2151	0.30	+0.6