Strain Fitness in Shewanella amazonensis SB2B around Sama_2090

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
2,532,432	-				-1.4
2,533,176	-		Sama_2090	0.22	-2.7
2,533,176	-		Sama_2090	0.22	+3.8
2,533,176	-		Sama_2090	0.22	+0.7
2,533,176	-		Sama_2090	0.22	+1.3
2,533,176	-		Sama_2090	0.22	+0.3
2,533,176	-		Sama_2090	0.22	-0.8
2,533,254	-		Sama_2090	0.41	-1.3
2,533,254	-		Sama_2090	0.41	+0.2
2,533,432	-		Sama_2090	0.86	-1.9
2,533,432	-		Sama_2090	0.86	+3.9
2,533,434	-		Sama_2090	0.86	+2.8
2,533,434	-		Sama_2090	0.86	+1.6
2,533,434	-		Sama_2090	0.86	+0.2
2,533,434	-		Sama_2090	0.86	+0.3
2,533,454	-				+0.0
2,533,462	-				-0.0
2,533,462	-				-1.0
2,533,465	-				-0.4
2,533,465	-				-0.6
2,533,528	-				-0.0
2,533,528	-				-1.3
2,533,531	-				+2.9
2,533,531	-				+0.9
2,533,531	-				-0.8
2,533,531	-				+0.6
2,533,531	-				+0.8
2,533,531	-				-2.3
2,533,533	-				-0.0
2,533,533	-				-0.8
2,533,533	-				+1.0
2,533,533	-				+3.5
2,533,533	-				-0.4
2,533,533	-				-1.0
2,533,537	-				-0.8
2,533,588	+				-1.4
2,533,595	+				-1.4
2,533,595	+				-0.8
2,533,617	+				-1.0
2,533,617	+				+1.4
2,533,617	+				-0.5
2,533,618	-				+0.2
2,533,618	-				-0.2
2,533,618	-				+0.1
2,533,667	+				-0.4
2,533,695	+				-1.3
2,533,695	+				-0.4
2,533,695	+				+0.1
2,533,695	+				-2.9
2,533,696	-				-0.6
2,533,696	-				+1.1
2,533,696	-				-1.4
2,533,696	-				+2.0
2,533,828	+				-0.8
2,533,828	+				-1.0
2,533,828	+				+1.6
2,533,828	+				+1.3
2,533,829	-				-1.0
2,533,829	-				+2.5
2,533,829	-				-0.9
2,533,829	-				-1.3
2,533,838	+				-0.4
2,533,841	+				-2.1
2,533,884	+		Sama_2091	0.11	+1.6
2,533,885	-		Sama_2091	0.11	+2.1
2,533,929	+		Sama_2091	0.13	-1.3
2,533,963	-		Sama_2091	0.15	+0.9
2,533,985	+		Sama_2091	0.16	+0.6
2,533,985	+		Sama_2091	0.16	+0.6
2,533,986	-		Sama_2091	0.16	+2.6
2,533,986	-		Sama_2091	0.16	-1.5
2,533,986	-		Sama_2091	0.16	-0.6
2,534,011	+		Sama_2091	0.17	+2.1
2,534,011	+		Sama_2091	0.17	-0.8
2,534,012	-		Sama_2091	0.17	-1.0
2,534,018	+		Sama_2091	0.17	-2.0
2,534,019	-		Sama_2091	0.17	-0.7
2,534,066	+		Sama_2091	0.19	+1.1
2,534,095	+		Sama_2091	0.21	-0.3
2,534,106	+		Sama_2091	0.21	+0.2
2,534,133	+		Sama_2091	0.23	-0.8
2,534,169	+		Sama_2091	0.24	+4.4
2,534,170	-		Sama_2091	0.24	-0.5
2,534,170	-		Sama_2091	0.24	-0.1
2,534,170	-		Sama_2091	0.24	-0.8
2,534,262	+		Sama_2091	0.29	+0.5
2,534,263	-		Sama_2091	0.29	+0.8
2,534,288	+		Sama_2091	0.30	+1.1
2,534,288	+		Sama_2091	0.30	+0.7
2,534,343	+		Sama_2091	0.32	-1.8
2,534,344	-		Sama_2091	0.32	-1.9
2,534,345	+		Sama_2091	0.32	-1.8
2,534,345	+		Sama_2091	0.32	+0.2
2,534,345	+		Sama_2091	0.32	+7.2
2,534,345	+		Sama_2091	0.32	+3.3
2,534,346	-		Sama_2091	0.32	-1.4
2,534,346	-		Sama_2091	0.32	-0.3
2,534,346	-		Sama_2091	0.32	-2.0
2,534,346	-		Sama_2091	0.32	+2.9
2,534,362	+		Sama_2091	0.33	+1.9
2,534,386	+		Sama_2091	0.34	-1.6
2,534,386	+		Sama_2091	0.34	-1.3
2,534,387	-		Sama_2091	0.34	+3.5
2,534,387	-		Sama_2091	0.34	-1.5
2,534,388	+		Sama_2091	0.34	+0.6
2,534,388	+		Sama_2091	0.34	-1.3
2,534,389	-		Sama_2091	0.34	+0.5
2,534,389	-		Sama_2091	0.34	-1.0
2,534,389	-		Sama_2091	0.34	+0.5
2,534,451	+		Sama_2091	0.37	-0.3
2,534,451	+		Sama_2091	0.37	+0.2
2,534,451	+		Sama_2091	0.37	+2.5
2,534,451	+		Sama_2091	0.37	+5.0
2,534,451	+		Sama_2091	0.37	-1.6
2,534,451	+		Sama_2091	0.37	+4.9
2,534,451	+		Sama_2091	0.37	-0.5
2,534,451	+		Sama_2091	0.37	-1.3
2,534,451	+		Sama_2091	0.37	+1.5
2,534,451	+		Sama_2091	0.37	+1.1
2,534,452	-		Sama_2091	0.37	-1.5
2,534,452	-		Sama_2091	0.37	+3.2
2,534,452	-		Sama_2091	0.37	+1.9
2,534,452	-		Sama_2091	0.37	-0.9
2,534,452	-		Sama_2091	0.37	-2.0
2,534,452	-		Sama_2091	0.37	-2.4
2,534,452	-		Sama_2091	0.37	-1.8
2,534,472	-		Sama_2091	0.38	-0.5